Apln005579.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- -
- Assembly
- None
- Location
- CADEBC010000483.1:1948076-1957068[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0052 0.32 11.6 1.1 3 23 708 729 707 729 0.96 2 23 0.32 20 5.9 0.3 1 22 1114 1135 1114 1135 0.95 3 23 6.2 3.8e+02 1.9 0.2 1 22 1177 1198 1177 1200 0.82 4 23 0.002 0.12 12.9 2.1 3 22 1211 1230 1211 1230 0.96 5 23 0.57 35 5.2 0.0 3 23 1239 1260 1237 1260 0.89 6 23 0.017 1 10.0 0.2 3 23 1280 1301 1278 1301 0.96 7 23 0.0018 0.11 13.0 2.5 1 23 1307 1330 1307 1330 0.95 8 23 0.12 7.3 7.3 0.0 1 23 1357 1380 1357 1380 0.90 9 23 0.0052 0.32 11.6 3.5 1 23 1385 1407 1385 1407 0.97 10 23 0.073 4.5 8.0 0.1 1 23 1413 1436 1413 1436 0.95 11 23 0.0022 0.13 12.8 1.3 1 23 1449 1471 1449 1471 0.97 12 23 0.00017 0.01 16.3 1.8 1 23 1524 1547 1524 1547 0.97 13 23 0.0079 0.49 11.0 1.1 1 23 1607 1630 1607 1630 0.96 14 23 0.0022 0.14 12.7 2.1 2 23 1657 1679 1656 1679 0.95 15 23 0.082 5.1 7.8 0.1 2 23 1685 1707 1684 1707 0.93 16 23 0.0093 0.58 10.8 0.2 1 21 1751 1771 1751 1772 0.95 17 23 0.0004 0.024 15.1 1.0 1 23 1782 1804 1782 1804 0.93 18 23 8.3e-05 0.0051 17.2 0.3 2 23 1894 1916 1894 1916 0.93 19 23 3.7e-07 2.3e-05 24.6 1.4 3 23 1923 1943 1922 1943 0.98 20 23 0.011 0.69 10.5 1.1 1 23 1962 1984 1962 1985 0.94 21 23 0.11 7 7.4 0.0 1 23 2010 2032 2010 2032 0.97 22 23 0.026 1.6 9.4 0.6 1 23 2038 2061 2038 2061 0.95 23 23 0.00024 0.015 15.8 0.4 1 23 2069 2092 2069 2092 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCAAAAATCAAGGATTGCGTGTCTGTAGAGATAAACGAAAATGATGAGCTGCCCACAAATGTCTGTAGAAAATGCATGGACAATGTCAATAATTggcataagtttaaaaatatttgtgaaaggACTCAAAACAAACTACAGTCTTTGATTAGTAAAGATGGCAGCCAACTAGAAGAGGTTCAAATTAAGAGTGAACCTTTGTCTGATGAAGCTTATGATGATGGAGTTGTTATTGAGGGTTCATATCCTGATAGTGAGAATGCCAGCGTGGCAAATAAAGTTCAACCTGAAGGTCCACCAATCTTGGCTTCATTGGGGCTCACACCTCGGAGTGATAAGAAGTGTGTGGATCCTCGAATGGATTGGCACCGAGTCTGTGCTATCTTGGACATGGTTCAAGACAATGAGGTGATTGACTCACTACAATCAAAGGAAGAGTGTGACGTTTTGCAACACTCTGATCATGACTCTGACACAGAGGCTGAACTTCAACCAGAAATTGAAGATAACTATGTAGATTGCAAAAATGGCTATGTCTGTAGAAATAATAAGGTTATATCAAAGAATCCTAAACTGTCACCATCtatgaataacattaaaattagagAAGCTCAGCAACTCAGGAAACGAAAATTAGATTATCCCAAACAGCACTGCCTGCGTCCTAAAAATGCTTGGCAATTATTATTCACTGATGACCTACTTGAGTTGATAGTCAACTCCACTAATGAATATATCGTCAAGAATGGAAAAAGTGACTCCATTGCAACCAATGTCAGcgaaataaaaacacttattgGCATTTTGTATTTGCATGGAATAATGCGGCCGACGCATGAAAAATGTATTGACCTTTGGCGTGGTGAATTTGGTGTACCTTGCGTTAGAAATTCCATGAAATATGACcggtttaaatttcttttacaaaaccTAAGTTTTGATCAACAGGACGGTGACACTATTATACAGTTTGATATAATGAAACGTATGCGTAAGGTATTTGAAATCTTTGCCATGAATTGCAGAACAGCTCATGAGATTGGGAATATTGTGGTTATTGATGAGATCATCGTTCCAGTTTATGGACCTTGTCCATTTCGATATGATATTGATAAGAAACCACTAAAGTGCGGAATAAAGATGATATTGCTTGTAGACTCATCAACATTCTACATAAGCAATTTAGATGTCATTACTGACCCATACTTTGGTTCTGAAGAGATTACTAAAAAGGTAGTTCAGCATTTAGCTGGTACTGGAATAACTATTGTTATGGATAGCTGGTATACTTCCTTAACATTAATGGAACGGCTTAGGAATGAGTATCAACTATTTACTATAGCAGCATTAAATCCAACCAATGACTGGATTCCACCCTTGTTCCTTTCTCAGTATAGAAAATGTAGAACATTTATGTCTGGATTTATTGATCATGATGTTTCAATTACATCTTACGTGAATTCtgatttaaaagcaataaatataataactaatgaGCCTAGATTTTACAGAAAAGGTCATGTGAACCAAACTACAGTTGTGTCTGTGTATAAGAAGAATCAATCAGCTGTAGAAGTGGTTGATGTTGTTATGAATTACTATACAACTATGCAACATACCAACGATTGGACTCTATCATTATTCTTTACGTTATTAAATATTGCTTCTGTCAATGCTCAGGTGTTATGGAGCTCTCAAAATACAAATGTTGCACAACGTCGCACTTTCATAAAGGATTTGGCCTTAAGCTTAATGGTACCTGAAGAGAGACCACAAATATCTACACTCAAATTAAACGATGTATGTGAAAGAGAACAGAATTTATCTTTGTTGCAAGAAATGGGAGTGGAAAGTGAGAAAGAAGAAGAGGAAGACGATGAAGAATTGAATGAACCTGCTCAACCATTCCCCAAAATGCCCCACATGCCGGAAGTGTCCATAACAGTAATGCGTCCTACGGGCGAGACCTTGCATGCACGCCAAGGTATACATCAATTAGCTTCTAAGGACTGTCTTGTCTGTGGCCGTACTTATAGATATTCCCACAATGCTCGTCGGCATGAGCTTACCGCTCATAGCTTTGACAGGTATACTAACAAAATAACTCCAAAGAAAACACTTGGTCATTTGCAACCCAAACTAAGACCTAATCCATTTAACCCTAAAGCGCGTTTAATGCCGAATCCTATTAGTCATAAGATGCAATTTATGCCCAAAAACATCCCAACGAAAgtagtacctataaataaagttatcacACCTCAAAAACCTATACCAATTAAATCAGTTAAAGCGTCTCAAAACAATTTGCCTTATCCACTTCGTATTAAAGCACTGAAAGATTTACAGATTAAGAAAAAGGAACCACAAATTTTAAAGACTCTGTTAACTTCTAAACCTGAAGTTCTGGTTTCTGAACCCGAAATAATAAATTCTGGACCCGAAAGTCCAGAGACACTGATATCTGAACCTGAAATAGCTTCGTTCCAAGTAGAAGCAATACTTTCGGAACCAGACGCCGACGGCTACGACCACCAACAGGGTGACGAGGAAGTTGATGGAGACATGCATAATAATCAAGGTCAGAATTATGATACGGTTGATATGAATTCTGAAAATGAAATTGAGATCGCGCGTCAACAAGGTGACGAGATAGATGGCGAAGAACAGGCTGATGGTGACGAAAACATGGATCAGGATGATAACATGGAAGGTGGTCAGAGTGAGAACGACCAAGAAGGAGACGATACAGCAGAAAGTCAAGAGAATGACATGGAGGATGGTATAGAAACGAAAACTGAACATGAATTGAAGGAAGGTGAGCAATTGCAAGAAGATAGGGAACATGAAGAAATAGAAATGAATCACGATGGAAACGAAGATGAAGACGACGAAGATTTGCCAATGACAATACAGCCAGTAGTCGAAATTAATGAAGACTTGCAGGCTAATTCGTTTAATACCGATGTAGCTGACGGTGATGACCTTGACGAGAGCGTTTATCCTAACGAGACCGTTGATCCTAATGAGACTGTAGACGAGGAGGAAGTCAAAGAACTCGATCCTGATAAAACATACGTAACAAAAACGCAAAGAGACTTCATTTTAAAGTATCGTGACGTTATTGAGCAAATCAATACAAAACGCTGTTTATGTTGTGACAGAGAACATCCGCGCCGAAAAGCGGTTATACAGCACTTGCAGAAGAATGGTCACAAAGTACCAAAACACACATGCTACAATTGCGTTGTTACATTTGGGCATATTGGTGCTCTGCTCAGCCACATGAGGTCGAATTCTTGTACTGATTTGTGGAAGATTATATACAACGAAAATGGTATTACTGATGACTTGGTTCTGGAGGATGAACCTAAGGAGGTCAAAGTCcagtataaagatatttttaatgctaGATCGTATGCTTGTAAACTATGTCCAGCAAAATTCcagttaaaacaatttataatgaAACATGTTTTGGATGCTCATGAAGATGGACAATCGAGAGTGCCTCTCGGATGTGTGCATTGTAGAGCAAGGTTTAAGGACAAGAGCTTGCTTAAAAAACATATTCGTAAAGGTGATTGCACAGTTTATGTAGCTTGTGACTTATGCCCAGAAACGTTCGGTAATATGCAGAGTTTTAATGATCACGCATTAGCCGTTCATGCCGGTAGTTTCGAATCAGATAGCCAAAGCAAATGCGTCGACGGTCGACCTACTGACTGTCCATTATGTGGCAAGAAAAATAGCAGCTATCCGAATTTagtaaaacatttgaaaattattCACAACGAGGAAACGCCTCACTACTGTCAGCACTGCGACTCTAAGTTTGAACAAGCTGCTGATCTCAACAAACACATTTACATGGAACATTCTGACAGAACTTTAGGTATGCAACAAAACAATGAGCCTGACATGTCCATTGTGAAGGAAGAGGCTGAAGAGTATCACTATTCCTGCACTGAGTGTAACGCCATATTTGAAACTGTCGATGCGTGGACTGATCACCAGGTTGCCGAACACAACCAAGTCGCTCATCACTGTGACCAGTGCGACAAGAAATTCTTGCGTCCCTCTGAGCTAGCAGAACACAAGAACACACATTTGAGGGTTAAGTTTTACCCTTGCAGCGTTTGCGCCAACTCTTATAGTACCCCTCAAAAACTTTCAGAACATGTGCAACAAGCCCATCCAGGAATTGGTGCAATTGCTGCAGCAGATTCAGAATTCTTTTGTGATATCTGTATAAGGTCATTTAAAAGTCGTCAAGCATATTCAAACCATATGCGTATACATGCAAAAGTGCCCACGACTAACAGAAAACCAGGAGATACTTCTTCTAATAAGGGATTTTCGCCCTCAATTATAGGCAAACCGATCAAACAAGTATACCCTATGGTCCAACCTGGTTTTGTCTCGTTTAAGCCTCATTACAATATTCCTAATGCTCCTTATTCCTGCGACATATGTGGGAAAGGATTCATGCATAAAAAGAACATATGGAAACACAAGAAAGTTTTACATGCGGATATATTGAACGAAAGAAACGACAGTGAGGAGAATACTATGCAAGCGTCCACTGAAGAGGACGAGTTCAATCCAGATGAAAACGGCGCTATTCTCTCGACGCCGCAGtttgatagttttaattttggCAATTTCGCGAATAATGTCCAACAAACACAACAAGATACAATGCCTTATTCGTGTGAATTATGTCTCAAACGATTTCCGCTTAGAACCAGTTTATGGAAACATAAACGTGCTAAACATGGTATTATTAATCCAAATTCTAGTGGCGGCAACGATTCACAAACGCCGTCGGCTAGTGGGGAAGGAAGCAGTAGATCGAGTTGCACAATATGTAGAATTACATTTTCAGATAAGAAATCTTATTATCGCCATCGAAAAAACGTTCACAAATCCACTGTTcaaatgtgtaaaatatgtgGAAAACCCCTTAACTCGACTTTAGAACTTTATGAACATTTGAAGGCTGCTCACGCTAGAGAACTTTTAGGTTACAACGCCAATCAAGGTTCGAGTAAATCTCTTGAAGTAGCACAAGAATTGGAACCTGATTATGAAAATGATCAAGAATCAGTGGATCCTAGCGTTGATTATCAGGCTCGATATCCTTGTGACACGTGTGGCAAACAATTCGTAGGTTTGTTAGCTTTGCAGAACCATCAGTGTATTAATCAAGCTCCACCTCAACCACAAACATTTGACTGTGAGATTTGTCACAAAAGCTACACGTCAATATCAGCTCTAAAGAGCCACCGTGGATGGCACTTACGATCACCGGATGGGAAAGCAGCTGCTAATAATAGTGGACTTTGGATGCCTCAGCACAAAGTCacaagtaaaataagtaaacatgAAGTCATCGATCCAGTACAACTTGCCAAAGTTACGCATTCCAGCCCAGCAGCTGCAGTTGCCGCTAAAAGAAGACTCCCACCTGAGGTCGAAGTTACTGTTGtcaatccaaataaaaaaatgcggTCTGATGATTCTGTTGAATTAGAACAACAAAATTCTAGTTCAGCTGAAGATAGATATTGCAACATTTGCGACAAGGAGTTTACTAAACGCGCAGCTTATCAGCGCCATATGGATGAGGTCCATCAACCGAATTCAGTATTTTGTCCAGTGTGTGATAAGAGTTTTACAAGAAAGTCTACGTTACTTATTCATATGAAGAAGCACTATGAGAGTGGTGAAGGAAGTTCAAGTATGGTTGGACAAGTTGAGGAGGAGTTGCACACGTGTGACTTATGTGGAGCCCAATACGACGATGAAGAATCGCTGAGAGCACATCGAGTCAGGCATCATGGTGAAGAATCTGAAGAAGACGATGACGATGATGGTGACGATGGCCACGTGCCCATTCCCCCCCCGGGTGAGTTCACTTGCGGGCAATGTGGAGATGGTGTAGCTACACCGCGAGATCTCATCGCTCATCGCACAATGCACTCTACTCCCACTAAATTCTTCTGTAACATATGCAAAGTATACTTTGCAAGAGCATTGGACCTCTCATCCCATACACGAGCTAGACATGCAGACAACGACAAGGTATTCTTTCCTTGTGCCATGTGTGACAGGTTCTACATGAACAAAAAGAGTTTGCAACGGCACATTGAAATGGCCCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVEINENDELPTNVCRKCMDNVNNWHKFKNICERTQNKLQSLISKDGSQLEEVQIKSEPLSDEAYDDGVVIEGSYPDSENASVANKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVCAILDMVQDNEVIDSLQSKEECDVLQHSDHDSDTEAELQPEIEDNYVDCKNGYVCRNNKVISKNPKLSPSMNNIKIREAQQLRKRKLDYPKQHCLRPKNAWQLLFTDDLLELIVNSTNEYIVKNGKSDSIATNVSEIKTLIGILYLHGIMRPTHEKCIDLWRGEFGVPCVRNSMKYDRFKFLLQNLSFDQQDGDTIIQFDIMKRMRKVFEIFAMNCRTAHEIGNIVVIDEIIVPVYGPCPFRYDIDKKPLKCGIKMILLVDSSTFYISNLDVITDPYFGSEEITKKVVQHLAGTGITIVMDSWYTSLTLMERLRNEYQLFTIAALNPTNDWIPPLFLSQYRKCRTFMSGFIDHDVSITSYVNSDLKAINIITNEPRFYRKGHVNQTTVVSVYKKNQSAVEVVDVVMNYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWSSQNTNVAQRRTFIKDLALSLMVPEERPQISTLKLNDVCEREQNLSLLQEMGVESEKEEEEDDEELNEPAQPFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKTLGHLQPKLRPNPFNPKARLMPNPISHKMQFMPKNIPTKVVPINKVITPQKPIPIKSVKASQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDADGYDHQQGDEEVDGDMHNNQGQNYDTVDMNSENEIEIARQQGDEIDGEEQADGDENMDQDDNMEGGQSENDQEGDDTAESQENDMEDGIETKTEHELKEGEQLQEDREHEEIEMNHDGNEDEDDEDLPMTIQPVVEINEDLQANSFNTDVADGDDLDESVYPNETVDPNETVDEEEVKELDPDKTYVTKTQRDFILKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDAHEDGQSRVPLGCVHCRARFKDKSLLKKHIRKGDCTVYVACDLCPETFGNMQSFNDHALAVHAGSFESDSQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEETPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMQQNNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQAHPGIGAIAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDTSSNKGFSPSIIGKPIKQVYPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNERNDSEENTMQASTEEDEFNPDENGAILSTPQFDSFNFGNFANNVQQTQQDTMPYSCELCLKRFPLRTSLWKHKRAKHGIINPNSSGGNDSQTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSLEVAQELEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQAPPQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPVQLAKVTHSSPAAAVAAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSSAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSMVGQVEEELHTCDLCGAQYDDEESLRAHRVRHHGEESEEDDDDDGDDGHVPIPPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01075719;
- 90% Identity
- -
- 80% Identity
- -