Apln011157.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Arctia plantaginis
Gene Symbol
RAP1GAP
Assembly
None
Location
CADEBC010000530.1:4896922-4930964[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.2e-05 0.023 14.9 0.0 6 43 429 469 425 483 0.89
2 2 1.8e-08 5.2e-06 26.6 0.0 50 108 600 658 590 660 0.90

Sequence Information

Coding Sequence
ATGACGCTTCaCCGTCACAGAAGATCGGGATCTCTTGATGAGGCAGCCGAAGATAGCAGTGACAATGGTGGTAGCACGCCCAAAAAGAAAACGGCGATTGAGGAGCAATGGGAGAGATCCGGTGGATTTGAACTCACATCTGTCGAACAAGAGACTTATGAGAAATACTTTTACGGAACGGAGCATTGGAACTACTTTACCAATGATGAAGACCTCGGTCCTGTTATATTGTCCATAAAACAGGAGACCCTTAATGCAAGGGATCAGTTCAGaattttaGTGCGAGCAATAAGCTATACCGTCCACGGTCTAATCCCAGCATCGTGCGTATTTGCGGATCGCTATAACAGAGAAGAGGTGGTGCGGTCGCTTGGCAAGGAAGTTAACATCAACCCGCCACTTATGCTGGGTCAGCTGCCTGACACACCGGAGGAGCTACTCAAACTTGATCAGGTGTTCATAAAGTCAGAGCTGAAAGTAGGCGTTATTTACGTGAAGGAGAACCAGTACACGGAGGAAGAAATTCTGGACAATAATGAAAACTCACCAATGTTCGAAGAGTTCTTACAAGTTTTAGGGGAGAAAGTCAGACTTAAGGGCTTCGACAAGTACAAAGGTGGTTTAGACACAGTTCATGATCTCACTGGCCTGTATTCCGTATACACTAACTGGCGAGGCATAGAAATAATGTTCCACGTGTCAACTCTGCTGCCCTACGAACGACACGACCCTCAAAAACTACAAAGAAAACGACATATAGGCAACGACATAGTGTGTGTCGTGTTCTTAGAAGCGGACAACACGGCTTTCTCCCCGGCATGTATCAAGAGTCACTTTTTGCACACTTTTATCTTAGTGCGAGTTTCGGCCAAAATCAAACGTCGTCCAACCAGATACGAAGTGTCCGTAGTTACCCGGGATGAAGTAGGTGCTTACAAACCCTATCTTTGGGAGCAAAGTGTCTTTGATAAAGGACCTATGTTCAGGGAATGGTTACTAACAAAGATTGTCAATGGCGAAAGGGCGTCATATTCAGCGCCTAAATTTGCCAGGATGCAGGAAAGAACGCGCAGTCAAATGTTAGAAGATATTGTTGCCAATTTACAAAACCACGCTGAAACTGGACAAATACCTAAACCTTATCGTAGAGGTTCGTGGCGTCCAATCGGCCATATGCGACCTTCCTCACCTCTCTTAGACTCAGTACGCGATCAGTTCGAAGACTACGATCAACTCGCCAAGGACTTTACCAGAGTCTTTCTGAATAGTGAACTGAACGTTGCGCAGAATGCTCAACTGTTTGACGTAGTCTTTCTCGTGGGGCAGTCGAAGCAGAAGACCAAATTCATTGGTGTTAGAGCCATTCTTGGTGTCAGGAGCAGGGTGTTTCAAGAAATGTTATACGGCATACAAACAGGATTCGGATCTCCTCAAGTTCCAGTTGCAGAACTTCTGGCTCGACCGGCACCAACATTGCTTTCTCCGACTCCAGCTCGGCAAAAGAGTAGCAACTTCTTGCAAGTTCCTGATATTGAATCGCCGAGGCCAAAAAGTGTTCCCAGTTCACCAATGGTGAAACGCGCGTTCTCTCGCTTGGGGACCATCACGGCTGGTTGGGGTCGATCCATTCGTAAACAACATTCGCAACTCAATGCAGAAGATAAAAAGAAATGGGCCAGCTCTCAAGATTGTTCAAATAAAGAAGGAAAAGacaaagaaaaagagaaaaatgcAGCACTGGCAGTACCCAGACTTTCCGTTTGCGCAGACGCACAAAAAGTTGATCGCGCTAAACTGGCACAAACAGAGTTTTCAATAATAGAATTCGACCCAGAAACTTTCCGGATTCTCTTGGATTATCTGCATACCGGCAGCTGTCCACTGACGTGTGCCTCAATACCAGGCCTCATTTGTGCAGCGGAGCATTACGACTTACCCGAATTACTGCAAGCATGTTTCCATCATGCTAAACAATTTCTTAGAATAGAAGTGgTATGCACGATGCTCATATCATTAGAAAACTACTACTGGCGATATACGTCAGCCTCGGAATTGGTTAATATGATCCTGGCCTTTATTGAGCAAAGAGCTTACGCGTTATTCCAAACACCTGAGTTTCTTAACCTCTCCGAATCAATGGTCCAAATGATTATGTGTCGAAACCTTGAGGTGCCTGAAGTGAGGAAATTTGAAGCGATGCTCAGCTGGGCCCGGAACAAAATTAAATCCAAGTCCGCCAATAAGACTGATgccaaaaatgaatttaaatgcaCTATGGAGAGATTAGCTAGAGACCTAAAACTGTACAGGATCTCACCGCAGGAATTGATAAAAGTGGTGCTCCCGTCTAAGGCTATAAAGAACGAGCGGATTCTCGAGACATTAATGTACCAAGCCAACTCGGGAATGTACAGAATTCAGGACAGTTACATAGAGGCCTGCCAACAGCGGCTGCAAAAGCAGGATTCGAGGTTTTCGGAGTTCGAAAGTTTCGACTACGGTATATAA
Protein Sequence
MTLHRHRRSGSLDEAAEDSSDNGGSTPKKKTAIEEQWERSGGFELTSVEQETYEKYFYGTEHWNYFTNDEDLGPVILSIKQETLNARDQFRILVRAISYTVHGLIPASCVFADRYNREEVVRSLGKEVNINPPLMLGQLPDTPEELLKLDQVFIKSELKVGVIYVKENQYTEEEILDNNENSPMFEEFLQVLGEKVRLKGFDKYKGGLDTVHDLTGLYSVYTNWRGIEIMFHVSTLLPYERHDPQKLQRKRHIGNDIVCVVFLEADNTAFSPACIKSHFLHTFILVRVSAKIKRRPTRYEVSVVTRDEVGAYKPYLWEQSVFDKGPMFREWLLTKIVNGERASYSAPKFARMQERTRSQMLEDIVANLQNHAETGQIPKPYRRGSWRPIGHMRPSSPLLDSVRDQFEDYDQLAKDFTRVFLNSELNVAQNAQLFDVVFLVGQSKQKTKFIGVRAILGVRSRVFQEMLYGIQTGFGSPQVPVAELLARPAPTLLSPTPARQKSSNFLQVPDIESPRPKSVPSSPMVKRAFSRLGTITAGWGRSIRKQHSQLNAEDKKKWASSQDCSNKEGKDKEKEKNAALAVPRLSVCADAQKVDRAKLAQTEFSIIEFDPETFRILLDYLHTGSCPLTCASIPGLICAAEHYDLPELLQACFHHAKQFLRIEVVCTMLISLENYYWRYTSASELVNMILAFIEQRAYALFQTPEFLNLSESMVQMIMCRNLEVPEVRKFEAMLSWARNKIKSKSANKTDAKNEFKCTMERLARDLKLYRISPQELIKVVLPSKAIKNERILETLMYQANSGMYRIQDSYIEACQQRLQKQDSRFSEFESFDYGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00383873; iTF_00447425; iTF_00446395; iTF_00445380; iTF_00806913; iTF_00856001; iTF_01161537; iTF_01509758; iTF_01388673; iTF_00033986; iTF_00206265; iTF_00010339; iTF_00055619; iTF_00146595; iTF_00198403; iTF_00654467; iTF_00289828; iTF_00782787; iTF_00815939; iTF_00815253; iTF_01076707; iTF_01444067; iTF_01564867; iTF_00009252; iTF_00382852; iTF_00648292; iTF_00720516; iTF_01260292; iTF_00345987; iTF_00147692; iTF_01281508; iTF_01360868; iTF_00156421; iTF_00702149; iTF_00786149; iTF_00970565; iTF_00971523; iTF_01026501; iTF_01118501; iTF_01437253; iTF_00288998; iTF_00164538; iTF_01248360; iTF_00934005; iTF_01217654; iTF_00262009; iTF_00365094; iTF_00758438; iTF_00934982; iTF_01221766; iTF_00285639; iTF_00660487; iTF_00689543; iTF_00811207; iTF_00850951; iTF_00408616; iTF_01331848; iTF_01341480; iTF_00114249; iTF_00257097; iTF_00144804; iTF_00623006; iTF_00027041; iTF_00205345; iTF_00441698; iTF_01010562; iTF_00923875; iTF_01064835; iTF_00149604; iTF_00409476; iTF_00449348; iTF_01339108; iTF_00712101; iTF_01041989; iTF_00356486; iTF_00907207; iTF_01139687; iTF_01534119; iTF_00076744; iTF_00276616; iTF_01452520; iTF_00195306; iTF_00375498; iTF_00155467; iTF_00041965; iTF_00281550; iTF_00745967; iTF_01135951; iTF_00071665; iTF_01507379; iTF_01133973; iTF_00180630; iTF_00924950; iTF_01080054; iTF_01532279; iTF_01090968; iTF_00961113; iTF_01332986; iTF_00908091; iTF_01020475; iTF_01159579; iTF_00685628; iTF_00412701; iTF_00680765; iTF_00681789; iTF_01081758; iTF_00325600; iTF_00458208; iTF_00659593; iTF_00834825; iTF_00791370; iTF_01156810; iTF_00050123; iTF_00275499; iTF_00871499; iTF_01018731; iTF_01155531; iTF_00172012; iTF_00204492; iTF_00302307; iTF_00869832; iTF_00301375; iTF_00208076; iTF_00288204; iTF_00284717; iTF_00818493; iTF_01208461; iTF_01209488; iTF_01386893; iTF_00186446; iTF_00889422; iTF_01312366; iTF_01569518; iTF_00210940; iTF_00000495; iTF_00390575; iTF_00827183; iTF_00926796; iTF_00634667; iTF_00843695; iTF_00651920; iTF_01016905; iTF_00744912; iTF_00859664; iTF_01230800; iTF_01451664; iTF_01506512; iTF_00824918; iTF_01337873; iTF_00358797; iTF_00112658; iTF_01561266; iTF_00425619; iTF_01246099; iTF_00411648; iTF_01492179; iTF_00012180; iTF_00802069; iTF_00836757; iTF_00935893; iTF_01426069; iTF_01548021; iTF_00148630; iTF_00209046; iTF_00650198; iTF_00794870; iTF_00844566; iTF_00994518; iTF_00115095; iTF_00273783; iTF_00837751; iTF_00932823; iTF_01117527; iTF_01264888; iTF_00709433; iTF_01082625; iTF_00875481; iTF_00876346; iTF_01533241; iTF_00432410; iTF_00642522; iTF_00781978; iTF_00888442; iTF_01092218; iTF_01202618; iTF_01402842; iTF_01439194; iTF_01438194; iTF_00407739; iTF_00663254; iTF_00840411; iTF_00948059; iTF_01502265; iTF_00040060; iTF_00450332; iTF_01335164; iTF_01359036; iTF_00666685; iTF_01027517; iTF_01490301; iTF_00072990; iTF_00074718; iTF_00695844; iTF_00125278; iTF_00250654; iTF_00013247; iTF_00468319; iTF_00683515; iTF_00923007; iTF_01031295; iTF_00677826; iTF_00457376;
90% Identity
iTF_00383873; iTF_00447425; iTF_00806913; iTF_01082625; iTF_01388673; iTF_01538945; iTF_00187330; iTF_00441698; iTF_00985314; iTF_00010339; iTF_00055619; iTF_00382852; iTF_00458208; iTF_00198403; iTF_00302307; iTF_00301375; iTF_00345987; iTF_00640579; iTF_00782787; iTF_01302563; iTF_01317475; iTF_01444067; iTF_01564867; iTF_00149604; iTF_00648292; iTF_00720516; iTF_01260292; iTF_01179639; iTF_01281508; iTF_01339108; iTF_01360868; iTF_00156421; iTF_00637861; iTF_01166894; iTF_00712101; iTF_01118501; iTF_01437253; iTF_00044678; iTF_00825989; iTF_00124454; iTF_00288998; iTF_00365094; iTF_00758438; iTF_00934982; iTF_01028486; iTF_01221766; iTF_00689543; iTF_00850951; iTF_00906343; iTF_01534119; iTF_00076744; iTF_00160008; iTF_00408616; iTF_00780392; iTF_01331848; iTF_01341480; iTF_01452520; iTF_01451664; iTF_00114249; iTF_00257097; iTF_00144804; iTF_00834825; iTF_00195306; iTF_01016905; iTF_01072720; iTF_00125278; iTF_00237930; iTF_00791370; iTF_00790469; iTF_01156810; iTF_00042827; iTF_00050123; iTF_00155467; iTF_00275499; iTF_00342379; iTF_00634667; iTF_00871499; iTF_01018731; iTF_01155531; iTF_01182027; iTF_01282539; iTF_00147692; iTF_00204492; iTF_00208076; iTF_01463468; iTF_00041965; iTF_00284717; iTF_01133973; iTF_00818493; iTF_01208461; iTF_01386893; iTF_00281550; iTF_00889422; iTF_01280558; iTF_01569518; iTF_00000495; iTF_00390575; iTF_00775407; iTF_00827183; iTF_01030415; iTF_00726626; iTF_01526243; iTF_00037991; iTF_00810279; iTF_00274585; iTF_01094223; iTF_00651920; iTF_00744912; iTF_00859664; iTF_01209488; iTF_01441264; iTF_01337873; iTF_01561266; iTF_00236787; iTF_00425619; iTF_01095123; iTF_01246099; iTF_01359923; iTF_01492179; iTF_00012180; iTF_00276616; iTF_00013247; iTF_00851988; iTF_01021460; iTF_01546804; iTF_01543120; iTF_00364213; iTF_00428309; iTF_00787841; iTF_01010562; iTF_00923875; iTF_00682599; iTF_01079211; iTF_01080876; iTF_00429197; iTF_00819342; iTF_01312366; iTF_00843695; iTF_01506512; iTF_00290865; iTF_00112658; iTF_00771226; iTF_01202618; iTF_00683515; iTF_01335164; iTF_01359036; iTF_01205855; iTF_00457376; iTF_01173459; iTF_00115095; iTF_00932823; iTF_00773045; iTF_00836757; iTF_00934005; iTF_00935893; iTF_01401461; iTF_01426069; iTF_01548021; iTF_00148630; iTF_00209046; iTF_00663254; iTF_00794870; iTF_00844566; iTF_00924950; iTF_00994518; iTF_01080054; iTF_01507379; iTF_01217654; iTF_00273783; iTF_00837751; iTF_01117527; iTF_01532279; iTF_01264888; iTF_01368280; iTF_00206265; iTF_00262009; iTF_00709433; iTF_00875481; iTF_00876346; iTF_00961113; iTF_01417017; iTF_01502265; iTF_00341498; iTF_00642522; iTF_00781978; iTF_00888442; iTF_00449348; iTF_00907207; iTF_00375498; iTF_00172012; iTF_00186446; iTF_00745967; iTF_00071665; iTF_00450332; iTF_01027517; iTF_00623006; iTF_01031295; iTF_00650198; iTF_01119546; iTF_01332986; iTF_01402842; iTF_01429210; iTF_00119759; iTF_00632929; iTF_00267369; iTF_00661489; iTF_01529363; iTF_00662390; iTF_01336090; iTF_01439194; iTF_01438194; iTF_00407739; iTF_00446395; iTF_00809339; iTF_00840411; iTF_00908091; iTF_01020475; iTF_01159579; iTF_00040060; iTF_00685628; iTF_01017884; iTF_01029436; iTF_00033085; iTF_00123549; iTF_00412701; iTF_00666685; iTF_00681789; iTF_00823197; iTF_01143965; iTF_01490301; iTF_00072990; iTF_00074718; iTF_01125634; iTF_00761854; iTF_01081758; iTF_00300415; iTF_00468319; iTF_00667711; iTF_00923007; iTF_01285727; iTF_01487871; iTF_00325600; iTF_00778144; iTF_00820256; iTF_01440256;
80% Identity
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