Axyl015815.1
Basic Information
- Insect
- Archips xylosteana
- Gene Symbol
- Zfy2
- Assembly
- GCA_947563465.1
- Location
- OX387362.1:694454-700097[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.75 55 5.3 0.0 1 23 183 205 183 205 0.93 2 18 3.8 2.8e+02 3.1 2.3 3 23 251 271 250 271 0.92 3 18 0.82 60 5.2 0.0 3 23 310 331 309 331 0.94 4 18 3.7e-06 0.00027 22.0 0.4 2 23 356 377 356 377 0.97 5 18 0.0069 0.5 11.7 0.1 2 23 386 408 385 408 0.94 6 18 0.74 54 5.3 0.0 1 23 414 436 414 436 0.88 7 18 0.022 1.6 10.1 0.1 1 23 442 466 442 466 0.93 8 18 0.00014 0.01 17.0 3.5 1 23 472 494 472 494 0.96 9 18 2.9 2.1e+02 3.4 3.5 1 17 567 583 567 589 0.82 10 18 0.00053 0.038 15.2 1.1 2 23 596 618 595 618 0.90 11 18 6.8e-05 0.005 18.0 2.9 3 23 626 646 625 646 0.98 12 18 0.0013 0.095 14.0 1.7 1 23 652 674 652 674 0.96 13 18 0.064 4.7 8.6 0.8 1 23 680 702 680 702 0.96 14 18 0.00039 0.028 15.6 0.1 3 23 746 767 745 767 0.95 15 18 9e-05 0.0065 17.6 3.0 1 23 773 795 773 795 0.96 16 18 0.0029 0.21 12.9 0.0 1 23 801 823 801 823 0.98 17 18 0.024 1.7 10.0 0.6 6 23 835 852 827 852 0.87 18 18 0.00047 0.034 15.4 0.8 6 23 862 879 862 879 0.99
Sequence Information
- Coding Sequence
- ATGAATAACGCTACCGAGCAAATATTTTTACCAAGTTCCTCGGGTACCCAGGATCAGCTCGGCCTGCCAAAACCCGGGAATGGACCGCAGCCAGTTAATCTGGACAGTGTGCAGGAGTTCTCAAAGGTGTGCCGCGTGTGTGCGGCTGTCTCCGAACTGGTCATGCCCATATTCAGTGGGGAAGGCTTGCAGAACAACCTAGCAGACAAGATTCACAAGCATCTTCCCATTAAGGTGTCGGAGAGCGACAGTCCAGGTCTGCCGGTGGTGGTGTGTTACCAGTGCGCGAGCACACTCCTGGCGACGCACGAGCTGGTGCAGTGCGCCGCGCAGGCCGACGCTGCCTTGCGCACGCGCAGCGCCGCGCTCGCCGCCGACGCCGCGCGCCGCCTTCAAGAGAAAGAGGAAAGTTTGCGAGCTGCTCAAGAACGCAACACGTCCGAGGGGACCTCACAGTGTGACCCATTAGTGTTAACCGCGGTCGTTAAAAGAGTGCTCGCGAATTATTTCCGAAAGTTGAACGTGGACGAGAGCGAGGATTTCGTGTTCGTGTGTCAGCCGTGTCAGCGGTCGGCTGCGACGCCGGACGCGCTCGCCGCGCACGTGGCCGCGCACGCGCCGCGCTCGCCCGCCGCCGCCGCGCGCTTCGTGCGCGACCACGTCACCTTCGACCAGCCGCTGGAGCCCGAGCCCCCGCCCCCGCGTCCGCGTTCGCGTCCGCGCCCGCGCCCGCCGCCGCCCGCGCGCTGCTGCCCCTTCTGCGACAGCGCCTTCTCGTCCGCCGCGCGGCTCGCCTGCCACCTGTCCTCGCACGTGACCGTCGGCGCCGGCAGCCCCGTCGAGTGCTGCGGCCGGCTGTACCGCGCGGCGGGCGCGCTGGCGCGGCACGCGCACGCCGCGCACGGCCGCGCGCCCGCCGCCGCCGCCTGCCGCGCCTGCGGCCACCGCGCCGCCTCGGCCGCCGCGCTCGCCGCGCACGTGCGCCGCGCCCACGCGCCCGCCGAGCCGCGCGCGCGCCCGCGCCCCGCGCCGCCCCGCCCCGCCGGCCTCAAGCGCGTGCCGGCGCGCTGCCCGCGCTGCGGCAAGACCTTCTCCAACAAGTACAACATGGCGGCGCACGCGCGCGCGCACGACGCGGCCCCGCCCGCGCGCCTGCCCTGCCCGCAGTGCCCGCGCCACTACGGCAGCCGCGGCGCGCTGGCGCAGCACGCGCGGCTCGCGCACGCCGGCGCGCTGCGCTACGCGTGCGGCGCGTGCGGGGAGCGCTTCGGCACGCGCTCCACGCGCGACGCGCACGCCGCGCTGCACTCGGGGCTGCGGCCGCACGCGTGCCCGCGCGCCGGCTGCGGCGCCGCCTTCCGCGCGCGCAACTCGCTGCTGCGCCACCTGGACGCGCACCGCGGCCTGCGCGCGCACGCCTGCCCGCACTGCGCGCGCGCCTTCCGCCGCGCCTCGCACCTCGCCTACCACCTGACCACGCACCGGCCCCGTAACGCCGCCCCTCTGTTGCAGCACGGGGCCCGAGCCGCCTATCCGGAGTTCACGGAGTCCAGCGAGGAATCGACGGCGGAGCGCGCGGCGGTCGACCCGGAGCTGCTGGACGATCTATCGGGCGGCAACATGCGCGTGTCGCGACTGGACGCCAATACCCGGCTGGCGCTGGCGCGGGCGCGGGGGCGCGCGGGCGGGCGCGTGTGGTACTCGTGCGGCACGTGCGGCAAGCGGCTCAGCAGCGCGCACACGTTCGTGTTCCACTGCCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGGCTGCAGCGGCACGTGGCGGAGACGCACGAGCGGCGGCGGCGGCGCGCGTGCCGGCACTGCGCGCGCACGTTCGCCAACTCGCAGAACCTGAAGCAGCACCTGCGCACGCACACGGGCGAGCGGCCGCACGCGTGCGCGCTGTGCCCGGCCCGCTTCGCGCACGCCGGCTCGCTGCACGCGCACCGCCGCACGCACGAGCCCGCGCGCCCGCACCGCTGCGCGCGCTGCCCCGCCGCCTTCCGCCTGCGCGCCGGCCTGGCCCGCCACGCGCACAGGCACACACACGCCTCCGCACCACCACCACCACCACCACCACCCGCCCCACCCAAGACGAGATCAGGAGCGTACGTAACGGAAACGCAAAACGCGACCGTCGAAAAGGAGGCGCGGGCGCGGCGCCGGCGGCACTGCCCCGCCTGCGGGCTCGGGTTCTCCGACGCCGGGAACCTGTCGCGACACGTCCGCGCCGCGCACGCGCAGCTCCGCCCGCACGCGTGCTCCCGCTGCGACGCGGCTTTCTCCCGCCGGGATCATCTCCGCGACCATGAACGAACCCACTTAGAGGCGCGGGAGTTTGTGTGCGCGGTGTGTGGCGTAGCATCCCGCTCGGCGGCGGCTCTACGGTCTCACGCGCGGAGTCACGCCCCGCGATGCCACGCTTGCCCCGCGCCGCCGTGCCGCGCCACGTTCCGGCGCCGCGCCGAGCTCCGCGCCCACTTGAGCGTGCACACAGGCGAGCGTGCCCACGCCTGCCCGTGCGGGAAAACCTTCCGTCTGCGCGCGCAGCTCACGCGCCACGCGCGCACGCACCGCTGA
- Protein Sequence
- MNNATEQIFLPSSSGTQDQLGLPKPGNGPQPVNLDSVQEFSKVCRVCAAVSELVMPIFSGEGLQNNLADKIHKHLPIKVSESDSPGLPVVVCYQCASTLLATHELVQCAAQADAALRTRSAALAADAARRLQEKEESLRAAQERNTSEGTSQCDPLVLTAVVKRVLANYFRKLNVDESEDFVFVCQPCQRSAATPDALAAHVAAHAPRSPAAAARFVRDHVTFDQPLEPEPPPPRPRSRPRPRPPPPARCCPFCDSAFSSAARLACHLSSHVTVGAGSPVECCGRLYRAAGALARHAHAAHGRAPAAAACRACGHRAASAAALAAHVRRAHAPAEPRARPRPAPPRPAGLKRVPARCPRCGKTFSNKYNMAAHARAHDAAPPARLPCPQCPRHYGSRGALAQHARLAHAGALRYACGACGERFGTRSTRDAHAALHSGLRPHACPRAGCGAAFRARNSLLRHLDAHRGLRAHACPHCARAFRRASHLAYHLTTHRPRNAAPLLQHGARAAYPEFTESSEESTAERAAVDPELLDDLSGGNMRVSRLDANTRLALARARGRAGGRVWYSCGTCGKRLSSAHTFVFHCRIHTGERPCVCHVCGKQFRAPNGLQRHVAETHERRRRRACRHCARTFANSQNLKQHLRTHTGERPHACALCPARFAHAGSLHAHRRTHEPARPHRCARCPAAFRLRAGLARHAHRHTHASAPPPPPPPPAPPKTRSGAYVTETQNATVEKEARARRRRHCPACGLGFSDAGNLSRHVRAAHAQLRPHACSRCDAAFSRRDHLRDHERTHLEAREFVCAVCGVASRSAAALRSHARSHAPRCHACPAPPCRATFRRRAELRAHLSVHTGERAHACPCGKTFRLRAQLTRHARTHR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00155531;
- 90% Identity
- -
- 80% Identity
- -