Basic Information

Gene Symbol
Xbp1
Assembly
GCA_947563465.1
Location
OX387347.1:20519063-20521858[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.1 9.1e+03 -2.5 0.0 16 25 29 38 28 39 0.72
2 3 1e-16 1.1e-13 51.7 15.5 2 62 43 103 43 106 0.94
3 3 0.00054 0.6 10.9 0.5 32 53 87 108 86 113 0.91

Sequence Information

Coding Sequence
ATGAGTGCTCCGATTATCATCACAGTTCCCAACAACTACCTGGCTATGGATGAGGTGGAGTCGAAGGTCGTGCTGGAACCGGCGCCGTCTCCCTCCAGGAAGCGGCGCCTGGACCACCTCACGTGGGAGGAGAAGATGCAAAGAAAGAAACTGAAGAACCGCGTGGCGGCTCAAACCTCCCGCGACCGCAAAAAGGCCAAAATGGACGAGATGGAAGAGAGGATCCAGCAGTTCATGGAAAAGAACGAGCGTCTGATGAGCGAAGTAGAGAGTCTAAAGGCGTTGAACGAGCGGCTGTTGAGTGAGAACGTGGAGTTGCGTAGCGCGGCGCTGAGTGTCGCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCGGCAGGAGGGGCCCCCGCCGGCACTCCGCGCGGCGCGGCTGCTCCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACCTCGACTCCCCAGAGTACCTCGACACCCTGCATCAACTGGCAGACTCCCTCTTCCAAGAAATTGATGCAAGTACTACAGGAAAGGCTCAAGATGTCCAAGTCGGGAACACTAGAGAGTGCTCTAAAGGAACTAAAGTGGTGGGGCCCGCAGCAGAGCACCTGGAACCCAGTGAAGGTGGAGTCGTAG
Protein Sequence
MSAPIIITVPNNYLAMDEVESKVVLEPAPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEERIQQFMEKNERLMSEVESLKALNERLLSENVELRSAALSVAGARGPAESTPRRQEGPPPALRAARLLLAMCLLSQTSSHTSTPQSTSTPCINWQTPSSKKLMQVLQERLKMSKSGTLESALKELKWWGPQQSTWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
80% Identity
-