Basic Information

Gene Symbol
XBP1
Assembly
GCA_963971205.1
Location
OZ020278.1:1893387-1895996[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-18 3.9e-15 56.2 9.1 2 52 42 92 42 94 0.97
2 2 0.00014 0.2 12.3 1.5 33 55 87 109 87 114 0.91

Sequence Information

Coding Sequence
ATGAGTGCTCCGATCATCATCACTGTGCCGAACAACTACCTGATGGAGGAGGTGGACACGAAGGTGGTGCTGgagccgccgcccgcgccgtccCGCAAGCGGCGGCTCGACCATCTCTCGTGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAGAATCGCGTGGCGGCGCAAACCTCCCGCGACCGCAAGAAGGCGAAGATGGACGAGATGGAGGACCGGATCAACCAGTTCATGGAGAAGAACGAGCGGCTTCTGAGCGAGGTTGAGAGTCTGAAGGCGCTGAACGAGCGGCTGTTGAGCGAGAACGCGCAGCTCCGCAGCGAGGCGGCGGCGCGCAGCGTCGCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCAGCAGGAGGGGCCCCCGCCGGCACTGCGCGCGGCGCGACTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACCTCGACTCCGACGAGTACCTCGACACCCTCAATCAACTGGCAGACTCCCTCCTCCAAGAAATTGATGCAGGTGCTGCAGGAAAGGCTGAAGATCTCCAAGTCGGGGAGTCTAGAGAGCGCACTGAAGGAGCTCAAGTGGTGGGGCCCGCGGCAGAGCACCTGGAACCCTGTCAAAGTGGAGTCGTAG
Protein Sequence
MSAPIIITVPNNYLMEEVDTKVVLEPPPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRINQFMEKNERLLSEVESLKALNERLLSENAQLRSEAAARSVAGARGPAESTPRQQEGPPPALRAARLLLAMCLLSQTSSHTSTPTSTSTPSINWQTPSSKKLMQVLQERLKISKSGSLESALKELKWWGPRQSTWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00155986;
80% Identity
-