Acra011393.1
Basic Information
- Insect
- Archips crataeganus
- Gene Symbol
- BTBD19
- Assembly
- GCA_947859365.1
- Location
- OX402058.1:20459991-20487245[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00048 0.18 12.6 0.0 2 44 27 70 26 89 0.75 2 2 8.8e-08 3.2e-05 24.7 0.0 53 108 140 195 131 197 0.93
Sequence Information
- Coding Sequence
- ATGGCGAGCAGAGTCCCCGGTGCATGCTGTGCTGCGTCGGTTGAGCGGGCCGGCTTGCCCGGCCTCCTCAGAGACTTGCAACGGTTATCTGAAGATCAAGATTCAGCAGACATCATATTCATCCTCGGAACATCGGAGGAAAAAATCTATGCGCACCGAGTCATTTTATTAGCCAGGAAGGCTCCTCTCCGAAGCAGATTCTTTGCCGCCGCCGCGTCTCCGCGGCCAACCAAGATTAATGATACCCACGCAAAAATTCACGACACAGGCTCAGGATGCGCAAGTTTTCAAAACACAAAGCGCGGCGAGCTATGCCGCATCCCAGGCGCCGTGGTGGCGCCCCCGGGCGCCGCGGGGGCGCCTTCAGGGTTCGCGGTGGCACCCTCGGGCTGCGCGGCGCTCCAGGGCGCACCCGCCATCGTTCGTTTACCCCACGTGCAGCCTGACACCTTCCGGCTCTTCATACAATATGTTTACACGGGCAAGCTGTTACTTCAAGATTCAGGAGTTTTTGAAATGATGACCTTGGCGGCGGATATGGGCGTGGAAGACCTTCGAGCAGCGTGTGAGGATCACGTTACTTCCACTTTGAGCGTGGAAAGTGCTTGCACCTTGCTTGCAGCAGCAATGGATATTCAAGATCGACCAGGCGGCAAGAGCGCGGCATCCTTCCTGGAGCGTTGCGTGGCGTTCATCGGCGAGCGCGCGGCAGACTGTGTCCGCACCAATGCCTTCCTCAACCTGCCCAAAGACGCGCTCATCAAACTCATCTCCTCCGACTTCTTGTGCTTGGAGGAGGAAGAGGTGTGGCGTTGCGCCTTGGCGTGGGCCAAGCAGCGCGCCGGCGTGACGCAGCCCTGCGCGCACTGGACCGAGGAGGAGCGCGCGCGCGTGTGCCTGCACCTGGCGCCGCTCATGACGCACGTGCGGCTGCTGCTCATAGACAGTTGCGTATTCGCGGAGGAGGTGGAGCCGACGGGCGCGGTGCCGATGGAGCTGTCGCTGGAGCGTTACCGACGCGCCGCGCTGACCGCCGCGCCGCCGCACGCGCCGCCCGCCGCGCCGCGCGACGACAGCCGCACCAGGCCCAGATTGGCGGTGAACATGTTTGCGGGCTCCACGATACTGCAGGCGGATAAGAGCGCGTACCAGGCCGTCATAAATAACTGGGTGGGTCGCGGCAAGCAGGCATGGCGGCTAGTGTTCCGCGCGTCGACGCACGGGTTCGGCGCCAGCGCCTTCCACAAGCACTGCGACGGCGTCGCGCCCGTGCTGCTGCTGGTGCAGTTGCCCCGCGGCGAGGTGATCGGCGGGTTCTCAGAGGCGGGTTGGAGCGGCGGCGGCGCGGGCGGCTACGTGCCGGCCGAGCGCGCCTTCCTGTTCGCGCTCCCCCCCGCGCCCGCGCCCTCGCACCCGCCGCAGCCGCCGCAGAAGCACCCGCTGCTCAAGAAGGCCTTCGCGCTGTGCTATCACCCCGACTGTGGACCAATTTTCGGCGCGGGCGCAGACCTGTTGCTATCCAGCAACTGCAACTGCAACAGCGACAGTTACAGCAACCTGCACTCGTACGGCGCGCCCGACGCCTCCGGCTCACTGGCGCCAGACTACAACTTCACTGTTCGTGACTACGAGCTGTTCACATACGCCAACTGA
- Protein Sequence
- MASRVPGACCAASVERAGLPGLLRDLQRLSEDQDSADIIFILGTSEEKIYAHRVILLARKAPLRSRFFAAAASPRPTKINDTHAKIHDTGSGCASFQNTKRGELCRIPGAVVAPPGAAGAPSGFAVAPSGCAALQGAPAIVRLPHVQPDTFRLFIQYVYTGKLLLQDSGVFEMMTLAADMGVEDLRAACEDHVTSTLSVESACTLLAAAMDIQDRPGGKSAASFLERCVAFIGERAADCVRTNAFLNLPKDALIKLISSDFLCLEEEEVWRCALAWAKQRAGVTQPCAHWTEEERARVCLHLAPLMTHVRLLLIDSCVFAEEVEPTGAVPMELSLERYRRAALTAAPPHAPPAAPRDDSRTRPRLAVNMFAGSTILQADKSAYQAVINNWVGRGKQAWRLVFRASTHGFGASAFHKHCDGVAPVLLLVQLPRGEVIGGFSEAGWSGGGAGGYVPAERAFLFALPPAPAPSHPPQPPQKHPLLKKAFALCYHPDCGPIFGAGADLLLSSNCNCNSDSYSNLHSYGAPDASGSLAPDYNFTVRDYELFTYAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00009259; iTF_00411659; iTF_00462572; iTF_00410511; iTF_00021489; iTF_00660499; iTF_00656314; iTF_01135959; iTF_01134981; iTF_01464347;
- 90% Identity
- iTF_00462572;
- 80% Identity
- -