Basic Information

Insect: Archips crataeganus
Gene Symbol: BAZ2B
Assembly: GCA_947859365.1
Location: OX402075.1:4161200-4192791[+]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.1e-13 8.3e-10 38.8 0.0 4 75 603 677 600 679 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.1e-13	8.3e-10	38.8	0.0	4	75	603	677	600	679	0.88

Sequence Information

Coding Sequence: ATGGCCTACCCAAACCGCATGCCGTACTGGGGCCGCGACGGCGGGGGCGGCGCGGCGCAGGCGCAGGCGCAGGCGCAGGCGCAGGCGGCGCTGTTCGGGTTCGGCTCGCGCTACCCCGCACAGCAAGCCGCGCTCGCCGGCCACGGCCAGCCGGGCTCCATGCCGCTGCACCCTGCCGCCAGTGCAGCGTGGTGGTCGATGGCGTCCCACCTCGCTGCGCAGGATTACCTGGCTCGGCTGCAGGCTTCGGGGCTGAACTTTGGAGGGCCTCTCGCTGACCCCTACTCGGCTCTGTCGGCGCTGTCGGCTAAGCCGGGGAAGGGGAAACAGCCGGCGAGGACGGAAAGGTCGGGCCGCAGTAGTACTTCGTCGAGCGCGTCGACGAAGGAGAAGAGTCCATCCACTAGCAATTCGCAGCCCAGTATGAGAGCGTCCTATGGTTTTCCCAAGACGTCATCGCCTTCGACGATGCATTCGCACTCGCAAGCAATGTCGAGTCTCGCTTCGCTCAATAGCCTCGCCTCTGCACCCCACCAGTCGAAGCCCAGCAAGCACCAGCCATCGCAGTCACGCAAGTCGTCGTCGTCAGCGTCGTCGTCTGGCAAGGGCAAGGACCGCGAGCTGGCGCTGCTTCGAGGCGACCTGATGCTGGCCCAGGCGGCGGCTCACGGGGCGTACCACGCCGCCGTCGCCGCCGCTGCTAAGGGCAAGAACATGTCTCCTCTCTATCCTTTCGGTATGCCGGGATCCGATAAGGACCGGCACGGCGGCATCGACTCGCTGACTGGTTTACCGCATACCATACTTAGTGCTGCTTTGGAAGGAGGTGATCCGTCGTCGGTGCTAGGCGGGGTAAGACTTCCGCCCGATACTGAAATTATCAAATACACCTCCTCGCTAGCCGGTCCGAAGGCACCTCCTGGTACCACGAATCGCGGCCGCAAGAAGACGATATCACTGGATCCCCCCCACGTCTCCGTGCATCCCTCCTCCGAACGCCCGCCCCACCCCAAACGGCAGAAGGTGGATGAGTACGGTAACTCCCGGTCGTCGGTTGAAGTGATCCGGCTGCCGACCAAGCCGGAGCGCGCCGGCCACCGGACCGGCAGCCCCGCCCCCAACCTCGCCGACTATGCGGGAATATCCCGTGAACTGCTCCAAACCATAGCCAGCCAGAGCGGAGTCAGCTTGGCAGCGCTGGAGAGGCAGCTGGCCGGCTCAGCCGCCGCTGACGGCAGCCTGAACCTGAGCACGAAGTCGAGCGCGAGCGCGGAGGAGTCGCCGCTGGACCTCGGGCTTAAGAGCGGGACGGACGACGACGCGCCGCTCAACCTCTCGCTCAAACCTACGCCACCGAGCTCACAAGCGTCAGATGCGCTGTCTCGACTAACGTCACTCAGTAGTTCTCTCAACGCTTCTTCGAGCAACGATAGGATATCCCGCAGGAAACCGGGCGCGAAGCCGCGGCGCGTCGTGCCTGAACTCAACTCTCAGGTCGCTGATTCCCCGCGACCCAAGTCAAGCGGCAGCGAGGACAGTGAATCGGTGGGTTGGCCGAACCGCGAGGGGCGGCCGCGGAACCTCGGGCGCGGGGTTAGTAAGCCCAAGAAGAACACCGTCGCCTCGCTCCTGGCCCAGAGCAGAGCGCTAGGGCTCCGGCCGGCGCTGGCGCAGCAGTTGCTCGGAGAGACTGACCTGGAAAAGCTAAAAGCGCTCCTTGGCGAAACGGCGAGTACAGACTCGGAATGCCCGTCGGACTCGTGCCCGTCGGACTCGGACGCGAGCGACACCAGCCGGCGGCCGCATGACTCGTCGCTCCGACAGACGCTGGCCAGAGGTTGGAAGAGGATAACAGTGATCAAGGGGCTGTCCCGGAACTGCAACATCAAAGGGGACGTGTCCTACTCGCCCCCGGAGCCGCACCAAGGCGTGAAGATAAAGAGCATGCAGGAACTACAGGCGTTCCTGGAAGCGAACCCCCACCCACCGCTGACGACAGATAACTTCAGCTTCAGCGCGCGGGTCGTACTGGGCGAATACGTGCAGCCCGCGCCCGACCTGCCTGAACCGCTGCTGTTCAGCGAGCCAGAGATCAACAAACGGTTGGAGGAAGCCCGCGCGTTAGCGGCGCTGACGGGGTCGCGGCCGACGCCGCCGCCCGTGGACCGCCGCATCGAACTCGCGCGTCGCCAGCAGGCAGCTCGCGACGCGCGACGCGACGCCAACTCGCGCTCGAGGGATCAGGCGCGGTTGGTGCGAGAACTCGAACGGACAGAGAAGGCAGAGCTAGTCAAGAGGGAGAAAGAGGCGCGCAGCCAACAACTGCTCGAGCATATCAACAAGAACCGTACGCAGCTAACCATCGAGCCGCTGCCGGCGATACCGAAAACCGGTGCCGAGTGGAAAATACCGGATCTAGTGATGGGACCGGCGACCAAAACGCAGAAGGAACGCATAATGCCGCCCATAAGCCTCTCCCTGATACCGGTATCCGGTACCAAGGATACCCAAAACACACCACTAAAACTCAACCTGGACCAATCCGGTTGGAAGGACCAAATCGAATACAATGCCCTAGATAAAATGAAGGACTTCGCTGAAAAAGCCGCTTTCGACTTACCTAAAACGTCTAAAGAGAAATCGTTCGATTTCTCCCTACTAAAAGCGCATCAAAAAACGCCGAACAAAGAGAACAGTCTCGAGAAACTAATAGAATCCTATTCGCGTATAACAGAATTCATAAACGGCTGCGATTGGTCGAAATTGCAAGCGAAAAAGCCTGACGATCCGAAGGCTTTAGAACGGAAATATTTGGATGCGAAGAATGAATTTATGTCACAGAACCTGATGTTGATGCCGAAAGTGTCGGCTAAAACAGTTCTAAAAGAAGTGATAGATCTCAGTGACGACGATGAATTGACAGAGATGTTGTCAAAGAAAGTCGGTAAAGGCGCTCTGAATGTTGGAAAAGATGGAGAGCTATCAATTTCGGTTCATCCTTTTGGAAAGGATATTCCGGCACAACCGTTCAACTGGACAGAGATGAGTGGCGAGCAATGCAGGATGCCTACACTCAGCATTGGGTGGCTACGGGCTGAAGAAGAGAGAGAGAGAGACAACCGTTCATACAAGTGA
Protein Sequence: MAYPNRMPYWGRDGGGGAAQAQAQAQAQAALFGFGSRYPAQQAALAGHGQPGSMPLHPAASAAWWSMASHLAAQDYLARLQASGLNFGGPLADPYSALSALSAKPGKGKQPARTERSGRSSTSSSASTKEKSPSTSNSQPSMRASYGFPKTSSPSTMHSHSQAMSSLASLNSLASAPHQSKPSKHQPSQSRKSSSSASSSGKGKDRELALLRGDLMLAQAAAHGAYHAAVAAAAKGKNMSPLYPFGMPGSDKDRHGGIDSLTGLPHTILSAALEGGDPSSVLGGVRLPPDTEIIKYTSSLAGPKAPPGTTNRGRKKTISLDPPHVSVHPSSERPPHPKRQKVDEYGNSRSSVEVIRLPTKPERAGHRTGSPAPNLADYAGISRELLQTIASQSGVSLAALERQLAGSAAADGSLNLSTKSSASAEESPLDLGLKSGTDDDAPLNLSLKPTPPSSQASDALSRLTSLSSSLNASSSNDRISRRKPGAKPRRVVPELNSQVADSPRPKSSGSEDSESVGWPNREGRPRNLGRGVSKPKKNTVASLLAQSRALGLRPALAQQLLGETDLEKLKALLGETASTDSECPSDSCPSDSDASDTSRRPHDSSLRQTLARGWKRITVIKGLSRNCNIKGDVSYSPPEPHQGVKIKSMQELQAFLEANPHPPLTTDNFSFSARVVLGEYVQPAPDLPEPLLFSEPEINKRLEEARALAALTGSRPTPPPVDRRIELARRQQAARDARRDANSRSRDQARLVRELERTEKAELVKREKEARSQQLLEHINKNRTQLTIEPLPAIPKTGAEWKIPDLVMGPATKTQKERIMPPISLSLIPVSGTKDTQNTPLKLNLDQSGWKDQIEYNALDKMKDFAEKAAFDLPKTSKEKSFDFSLLKAHQKTPNKENSLEKLIESYSRITEFINGCDWSKLQAKKPDDPKALERKYLDAKNEFMSQNLMLMPKVSAKTVLKEVIDLSDDDELTEMLSKKVGKGALNVGKDGELSISVHPFGKDIPAQPFNWTEMSGEQCRMPTLSIGWLRAEEERERDNRSYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00325404;
90% Identity: iTF_00325404;
80% Identity: -