Acra011461.1
Basic Information
- Insect
- Archips crataeganus
- Gene Symbol
- -
- Assembly
- GCA_947859365.1
- Location
- OX402069.1:209461-211225[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0041 10 7.2 0.0 52 86 117 150 104 151 0.84 2 4 0.0069 17 6.5 0.1 51 86 210 244 189 245 0.81 3 4 0.49 1.2e+03 0.5 0.1 49 81 300 331 282 351 0.75 4 4 0.0035 8.8 7.4 0.0 51 83 400 431 391 433 0.82
Sequence Information
- Coding Sequence
- ATGGATGTAAACCCACATAACCAAAACCAAAGTTACTGGTTTGTGTTTAGAGAAGACCAAAGTAATGTTATATTCAGCAGCAACAACTTCACAATACAGAATCCTACACAAATAACCGCACAAGAGGCTCGATACATAGTTGACACAGGTACAGGAGATAGCAGACAGTACATCCAGATCAATGAAACACCCACAACAGTCCAACAAGAGCTAGCAGAGCCCCCTCAGTGTGACAAAGAAGTAGAGAAGCAAAAAGAAGAAGAAACTTTTTGGGATCAAAGCAAAATCAGATTGCTTCTCACACTATGCCTTGAAAACAAACTAAGCAACACTACTGGTACCAGGGACACAACTCTCTGGAATGACATCGCAGCCACAGTGGGCACAACACCAGAGGAGTGCAAAAAGAAACACAGGAACCTCAGAAGAACTTACATCAGACTATTAAAAAAGAAAAAGATGGGCAGGAATATCAAATGGCCACACTTCAGCCTTTGTGATGAAATTTACAAGGAATATAAGGGCCTTCACCCTGCATTAATTGAACCTTGGGAGGATATCAAAACAAGACGGCTCCTTAGTCTTTATATAGACAATCTCCACCGATTTCGTAACTCCAACTGCCTTCAAAAGGACATTTGGAAGGACATAGCTTCCCAAGTAGGCTCAACTGAATATAGTTGTTACCATAAGTTCAAAAACTTAAAAAAAGCTTATATGACCTGGCTAGTACGCAGTCATGAAACTGGCAAGCTCGTCAAGAAATGGCCATATGTGCATTACTTTGAAAGGATATTTTACAATTACCATCCCATCCTGGGACCCTGGGACAGCTTCAAGACTAAGCTGTTGCTGAATGTGTATGCTCAGCGTAGCCACAAGTTCAAAAATCCTAAATTTCAAAAGAAGGAACTCTGGAAAGAAATATCCACAATAGTAGGAGAGAGTCCCTATGCTTGTGATAGGAAATTCAGAAACTTGAAACAGACCTACATTGTTATAAAAAGCAAATTAGGCACTGATAGACGTAACACCAAGTGGCGCTACTTTGTTGATTTTGAAAACATCTATAATAGTGGGGCATGCTCCAGCAACGAGGCAGGCCTGTCCAAAATCACAGCTCAAGAGGATTACATCAAACAGTTGCTGCAATTTTATTTAGACCATAAAGATAAATTTAAAGACCCTCTGACTAAGAAAAAGAATCTGTGGAAAATTATCAGTACAAAGTTAGGGTTATCTCCTGAAGTATGTGACACAAAATTTAGAAATTTAAAGCAAACTTACATCAGGCTAGCAGACAGGAAAAAAGAGACAGGAGAAGATATTAAATGGCCATACTATACATATTTTGAAAAAATATATGACATTGTTGAAGATACCTTCTCCAAGATCAGGGTTGTTCAAGATGTCCACCAGGACAGGAAAGATAATGATCATAAATTTGAAAGACTTCTCAACTTGGTAgaagagtcaaataacatacaaagggaaagaaataagattcttcaggctttaatcaatcaaaaaccggtcaagtcagagtcgaacttgtgcacagaaggttctgtacatttaggagacaatgacttgttaagtttatag
- Protein Sequence
- MDVNPHNQNQSYWFVFREDQSNVIFSSNNFTIQNPTQITAQEARYIVDTGTGDSRQYIQINETPTTVQQELAEPPQCDKEVEKQKEEETFWDQSKIRLLLTLCLENKLSNTTGTRDTTLWNDIAATVGTTPEECKKKHRNLRRTYIRLLKKKKMGRNIKWPHFSLCDEIYKEYKGLHPALIEPWEDIKTRRLLSLYIDNLHRFRNSNCLQKDIWKDIASQVGSTEYSCYHKFKNLKKAYMTWLVRSHETGKLVKKWPYVHYFERIFYNYHPILGPWDSFKTKLLLNVYAQRSHKFKNPKFQKKELWKEISTIVGESPYACDRKFRNLKQTYIVIKSKLGTDRRNTKWRYFVDFENIYNSGACSSNEAGLSKITAQEDYIKQLLQFYLDHKDKFKDPLTKKKNLWKIISTKLGLSPEVCDTKFRNLKQTYIRLADRKKETGEDIKWPYYTYFEKIYDIVEDTFSKIRVVQDVHQDRKDNDHKFERLLNLVEESNNIQRERNKILQALINQKPVKSESNLCTEGSVHLGDNDLLSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00325157;
- 90% Identity
- -
- 80% Identity
- -