Acra023202.1
Basic Information
- Insect
- Archips crataeganus
- Gene Symbol
- Rel
- Assembly
- GCA_947859365.1
- Location
- OX402055.1:7487681-7536804[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-36 2.2e-32 113.0 0.8 1 168 46 215 46 216 0.89 2 2 2.4 1.3e+04 -3.5 0.1 99 118 247 266 246 287 0.76
Sequence Information
- Coding Sequence
- ATGTCTTCATGTAACCAGGACTCCATGAGTGAGTGCTGGTCTCCTTCCTCTATGGAGTCCCCTCTCAGCTCACCGTCGCAGCAAGTGCCTCAGTTGACTATTGGTATAACAGAGTTGATGAGTGGTAGGCCATGTCTACAAATCATCGAGCAACCACAGAACCATTTCCGGTTCCGCTACAAGAGTGAGATGGTGGGAACACATGGCTGCATTTTGGGGAAAACAAGCTCGTCAAATAAAACCAAAACTCACCCTACAGTGGAGTTGGTGAATTACAAAATGAAAGCATTGATCCGGTGCCGGTTGGCGCAGCACGGGAAGGATGACGAGCATCCGCATCAGCTTTTGGAGGATGAACAGGAGGATCGCGACGTCAGCGCGATGGTGCCCATGGATCGCAGTTACAGAGTCGGATTTCCGGGCATGGGCATCATACACACGGCTAAGAAAGATGTGGCTAACCTGTTATACAATAAGTGTATTAAGAATGTACAAAAACCCATCAATTATGAAAAGCTCAAGGCTCTCTGCGAGTCGCAGGCTAAGACCATCAACTTGAATATAGTGCGGCTAAGGTTTAGCGCTCACGACCCAGACACGGACCGAGAAATCTGTGAACCAGTGTTTTCAGAACCCATCCACAACATGAaaAGTGCAGCGACCAATGACTTAAAGATATGCCGTACAAGCCGTATTTACGGGGACCCTAAGGGCGGAGATGACGTTTTCATGTTGGTTGAAAAAGTCAATAAAAAAAACATTGAGATCCGTTTCGTGGAGCGCAACGAGGCTGGCGCCGAAATTTGGATGGCGAAGGCCCATTTCTTGCAAACCGACGTGCATCATCAGTACGCTATAGTGTTCAGGACTCCAGCATACAAAGACCAGCACATCACGAACGACGTAAAAGTGCACGTGGAACTGTTCCGGCCTTCGGACAACCGCAGAAGCGACCCCATAGAATTCAAATATCGAGCGGATCCGTTATCCCGGCAGACGAAGAAAAGAAAGACTGATAGCTCGCCATATTCCTCTTGGAATAGTTCTCTAGGTACCGGATCCATTAAGAGCCTAAGTGATTTGCCATGCCCGATTTCGAATATGTTAGGTAACACGGGGAATGCAGACATAGAAAATGGTATATCAGGAATACCTAACGCAATGCCCCAAGTTATACAAAATCCTGGCAACGTGTGCTTGGAGGATGCGTTGTATGCGGGACCCGAACAGGCATACGAGCTGCACTGTTCCGTCGGCGTGGGGCCCATGATGCCACAGGTTGTGGACTTCCCGGATATACGCATGACCTCTGCTGAGTTCCAGAAAGTGATCACCTCACCGACAGAGATGCAAGACTTCAACGGTTTATTACAGGATGTCCTCCGTGAGGATTCGTATAATTTATCATGGGTTGCGGATTCTGGTCGGGGAAAGGCTCGGCCTCGGGGTGCAAATGACGCTGCAGTAACTCCATCCACTTCTCGAATTAAATCAGAAAAAATGAATCAGGACAACGCTGAAGAATCAACCAATGAATATACAGGAGTATATACCACTGAACACGGAGAAGAAGTAAGAAAGTTGGTGAAGGAAATTTGCGACCATATAAGAAATAAAAGCGGCATCAAGAAGCAAGTAGTAAAAGGAAAACTGGACCGACTATTTCAGTTGCGTCTTTCAAATGGTGACACGTTCCTCCACATGACTTTGTTCAACAACCGGCTGAACTTCGAAAACATCGCGAAACTTATACACATGATGAAGATGCCGCAACTGTTCAATCTCCGCAACGATCTCGGCCAAACCATCTTGCATACCGCTGTCGTCTATGATATTCCTGAGTTGATGTCGTTCCTTATATCTAAAGGCTGCGACCCATCCGTCGGCGACCACAAGGGCAACACCGCTGTCCACCTCGCAGTGAACTACCAGCAGGCGTGCCTGCAGCCGCTGCTAGTCGCGATCGGGAGCCACGGCGGCACGAGTGTGCTCAACGATCAGAATAACGAGAAGCAAACTGCACTGCATTTGGCAGCCGTCCCGGGTGCGGACCCGGCTGCGGTGACGGCGTCGGTACGAAGCATCGAACTGTTGCTGCAACACGGCGCGATCCACAACGTGCGAGACCGTGAAGGTCGCACGCCGCTACACATCGCCGTCTACGACGATTGCATGCCTGTTGTGGGCGCTTTACTGAAATTTATACCATCGAGTGACATCGACGCTGTAGACGGGAGCGGTAACACGGCGCTGCAGATCGCTTGCGGTGGCCAACTGAGAGACAACACAGTTGCCATTGTGAAAATGTTGATTGAGAAAAAGGCGGACCCGATGGCGCACGAAGAGGGCAGGGCGAACGCGTGGCGTCTGGCCGCCGACAAGCCGGAGCTAAAGGAGGTTCTAGCGGCGTTCGTGCCCGTCGAAGCCGAAGTCAAGTCCGAGCCGGAGGACAACTTCGAGTCAGCCGATGAAGGGGAGGAGCCGTGTCTCGGCGACCAGCTGTCCCTCTACTTGGGCGACGTGTCGCGGCTACTGGACGGCAGCGGCGCGTGGCGCGCGCTCGCCAGCCGCCTCGACTACGACGGACTCGCCAACTGGTTCCAAAATACCGTCAGCCCCACGCACACTCTGCTCAACCAGGTCAAGGAGTGCCAAGATAGAAAGATTACTTCTAAAACTCTGATAGTGATGCTGGAAGAGTTGGGACAGACAGAAGCGGCAGGACTCATACGAAGCAGAATTGGTTCTTTCAATTAA
- Protein Sequence
- MSSCNQDSMSECWSPSSMESPLSSPSQQVPQLTIGITELMSGRPCLQIIEQPQNHFRFRYKSEMVGTHGCILGKTSSSNKTKTHPTVELVNYKMKALIRCRLAQHGKDDEHPHQLLEDEQEDRDVSAMVPMDRSYRVGFPGMGIIHTAKKDVANLLYNKCIKNVQKPINYEKLKALCESQAKTINLNIVRLRFSAHDPDTDREICEPVFSEPIHNMKSAATNDLKICRTSRIYGDPKGGDDVFMLVEKVNKKNIEIRFVERNEAGAEIWMAKAHFLQTDVHHQYAIVFRTPAYKDQHITNDVKVHVELFRPSDNRRSDPIEFKYRADPLSRQTKKRKTDSSPYSSWNSSLGTGSIKSLSDLPCPISNMLGNTGNADIENGISGIPNAMPQVIQNPGNVCLEDALYAGPEQAYELHCSVGVGPMMPQVVDFPDIRMTSAEFQKVITSPTEMQDFNGLLQDVLREDSYNLSWVADSGRGKARPRGANDAAVTPSTSRIKSEKMNQDNAEESTNEYTGVYTTEHGEEVRKLVKEICDHIRNKSGIKKQVVKGKLDRLFQLRLSNGDTFLHMTLFNNRLNFENIAKLIHMMKMPQLFNLRNDLGQTILHTAVVYDIPELMSFLISKGCDPSVGDHKGNTAVHLAVNYQQACLQPLLVAIGSHGGTSVLNDQNNEKQTALHLAAVPGADPAAVTASVRSIELLLQHGAIHNVRDREGRTPLHIAVYDDCMPVVGALLKFIPSSDIDAVDGSGNTALQIACGGQLRDNTVAIVKMLIEKKADPMAHEEGRANAWRLAADKPELKEVLAAFVPVEAEVKSEPEDNFESADEGEEPCLGDQLSLYLGDVSRLLDGSGAWRALASRLDYDGLANWFQNTVSPTHTLLNQVKECQDRKITSKTLIVMLEELGQTEAAGLIRSRIGSFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00325138;
- 90% Identity
- -
- 80% Identity
- -