Adep002714.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- Hr39
- Assembly
- GCA_963662175.1
- Location
- OY759214.1:34114012-34139698[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.092 2.3e+03 -0.9 3.1 76 157 163 265 109 286 0.46 2 4 4.3e-09 0.00011 23.3 0.1 1 31 402 432 402 441 0.80 3 4 0.05 1.2e+03 -0.0 0.0 84 113 433 462 426 471 0.81 4 4 8e-66 2e-61 210.1 0.0 208 408 494 689 481 689 0.97
Sequence Information
- Coding Sequence
- ATGGAGGGCGGCGTCAAGTGGGCTGAGGCGCGGCTCACCTCAGGCCGGGTCACCGTCACTGTACACCGCTCTAAATCAGacaaagaaGAGAAGTATTATTCATCTCAGTGTAATGgGAGCGCTTGTTCTGTGGTTGTAAGCAGCAATGAAATGAACGTTGATGAAGATTCATCAGCTGCTGACGCTGAAGTCAGCACATTTACTTGTGAGACAGtAAATTTAAGAAATAAGAAACATGGTGAGGGTGCAAGAAGTCCGATGGAGCGGCCCATGTCCTGGGAAGGAGAGCTCTCCGACTCGGAAGTCTCCACAATCAAGCCCgATCCTGAAGAAAGTAACACGGATACTGCTGACTCTTCTGGTAATAGCATAAAAGTGATCAAAGGACAAGGAGAGGGCGAGAAGTCGCACTCTCAAAAACACAACGAGACAATCAATGAAAAACTATTGGACCAAGTAAGGACAAATCATGCGAATTGTCAATCAGAGCTTCCCATTCTAGTGGACAAACTTTTAAGTAGTAGTGGAGGTGGCTACCTGAAAGGAGGCCCGGGACCCACCCCCAGCCCTGACTCGGCTGTCTACTCGTGCTACTCACCTACAGCTGCCAGTCCAGTCACCCAGAGGCACATCCTTTCATCCTCCTCTGGAATCTCCAGTCCCTTCACCCCCTCTCTCTCCAGGAACAACAGCGATGCTTCTCAGTATGGCGGCTCCCAGCACTCATCACACTCCTGCTATAGTCATAGTTACTCATCAGTGTCAGTGTCGCCAACACAGTTCTCCCCGACTCACTCCCCGATCCAGGGGCGCCACATCCACAGGCCAGGCTTCCCATCCCCCGTCCTCAATTCGAGGGGCCTCCACGACTACTCCCTCCAAGATGGAGGAGGAGGTGCGGAGGACAAATTTGCCTCTCTCACTGCTGACATGGTCCAACACTCACCCGGCCTCGCCTCTCCTGGCATCAGCCGACAGCAGCTTATCAACAGTCCTTGCCCCATCTGCGGTGACAAGATCTCAGGTTTCCACTACGGAATCTTCTCCTGCGAGAGCTGTAAGGGGTTCTTCAAGAGGACAGTACAGAACAGGAAGAACTACGTCTGTCTTCGGGGATCCTCCTGCCCTGTCACAATCGCCACCAGGAAGAAGTGTCCCGCCTGCCGCTTTGACAAGTGTCTTAATATGGGCATGAAGTTGGAAGCTATCCGAGAGGACCGGACCCGAGGTGGACGCAGCACATACCAGTGTTCATACACAGTGCCAGCAGGTCTGGTGGAGCAGCAGAAGTGTGCTGAACAGCAGCAGACCAGACAGGATCAGCCACCCTCTAACCATGTACCTCTTCTCCTACAGGAGATAATGGAGGTGGAGCACCTGTGGCAGTACAACGAGGGTGACTCCAAGATGTCGGGGGGTGGCGGTGGAGGAGGTCCAAGGGGGAGCCATCCTAGCACCGGGGGTGGTGGCAGTCCTGCAGACCTCATGTCCAACCTGCACAACATTGCTGACCATCGCCTCTACAAGATAGTCAAGTGGTGCAAGTCTCTGCCTCTCTTCAAGAACATCTCCATTGACGACCAGACATCGCTACTGATCAACGCGTGGTGCGAGCTTCTTCTCTTCTCGTGCTGCTTTCGGTCGATGAGCTCCCCAGGAGAGATCCGGGTTAGCCTGGGCAAGTGTATCTCTCTGACGGAGGCCAGGTCCATGGGGCTTGGTCCCCCCATTGAGAGGATGCTGAACTTCACCCAACATCTGCGACGACTCAGGGTTGACCGCTATGAGTATGTGGCCATGAAGGTCATCGTTCTTCTCTCCTCTGACACAAGTGATCTTCGAGAGCCAGAAAAAGTGCGTGCGTCTCAAGAGAAAGCTCTCCAAGCCTTGCAGCACTACACGCTGGCACACTATCCAGACATTCCGTCCAAGTTCGGGGAGCTGCTCCTCAGGATACCCGACCTACAGCGAACCTGTCAGGTGGGTAGAGAGATGTTATCCCTGAAAAGTAAAGAAGGGGAAGGCCCTAGTTTTAATCTTCTTATGGAGCTTCTGAGAGGAGATCATTGA
- Protein Sequence
- MEGGVKWAEARLTSGRVTVTVHRSKSDKEEKYYSSQCNGSACSVVVSSNEMNVDEDSSAADAEVSTFTCETVNLRNKKHGEGARSPMERPMSWEGELSDSEVSTIKPDPEESNTDTADSSGNSIKVIKGQGEGEKSHSQKHNETINEKLLDQVRTNHANCQSELPILVDKLLSSSGGGYLKGGPGPTPSPDSAVYSCYSPTAASPVTQRHILSSSSGISSPFTPSLSRNNSDASQYGGSQHSSHSCYSHSYSSVSVSPTQFSPTHSPIQGRHIHRPGFPSPVLNSRGLHDYSLQDGGGGAEDKFASLTADMVQHSPGLASPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGSSCPVTIATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCSYTVPAGLVEQQKCAEQQQTRQDQPPSNHVPLLLQEIMEVEHLWQYNEGDSKMSGGGGGGGPRGSHPSTGGGGSPADLMSNLHNIADHRLYKIVKWCKSLPLFKNISIDDQTSLLINAWCELLLFSCCFRSMSSPGEIRVSLGKCISLTEARSMGLGPPIERMLNFTQHLRRLRVDRYEYVAMKVIVLLSSDTSDLREPEKVRASQEKALQALQHYTLAHYPDIPSKFGELLLRIPDLQRTCQVGREMLSLKSKEGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00154547;
- 90% Identity
- iTF_00154547;
- 80% Identity
- iTF_00154547;