Adep035246.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- Lrrfip1
- Assembly
- GCA_963662175.1
- Location
- OY759222.1:21178998-21185313[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-26 6.6e-22 79.6 9.3 1 91 23 107 23 112 0.86
Sequence Information
- Coding Sequence
- ATGGATGTGATGTGGATGTGGAGGTGTGCCCTGGCCAGGCCATGGATCCTGTTACCTCAGCCTCTGGCGGAGGCGCGACTGGCGGCGAAGCGGCAAGCCCGAGCTGAGGCGAGAGAAATCCGGATGAGAGAAATAGAGCGTCAACAGAAAGAGCAGGAAGAGAGAACTGGCTACGACGGAGaTGGTGTACGGAGTGGAAGCCGTGGTGTCCTCAACAGCAGCAGTGGCCGTCTATCAGCCTCCAACAGTTACCACTCGTCCAGAAGAAGTTCCGAGGACTCACTCGAAGAGACATCATCCCTCGGACACATCAGGGTGAGCATAACTTCTTACCTAAGTCTCTCACACCATGTCAAATCAATTGATCAATTAATTTTCTGA
- Protein Sequence
- MDVMWMWRCALARPWILLPQPLAEARLAAKRQARAEAREIRMREIERQQKEQEERTGYDGDGVRSGSRGVLNSSSGRLSASNSYHSSRRSSEDSLEETSSLGHIRVSITSYLSLSHHVKSIDQLIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -