Adep035247.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963662175.1
- Location
- OY759222.1:21192696-21201407[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-68 3.1e-64 218.6 19.0 88 300 43 301 2 301 0.81 2 2 0.021 3.4e+02 1.7 5.1 122 172 301 351 299 357 0.90
Sequence Information
- Coding Sequence
- ATGGAATCTGAATCAGAGGAACCGTCTGACGGATCAGTGAGTGGGGAAAGTGAGGAATCGAGCTCTTTGTCATCTTCGGATGTCGTAGAAGAGGCTCCAGCAGATGAGGATACCTCTGTTGAGGAGGAAGACGAGGGGAGTGGTTCGAAGGATGAGGAAGAAGGCCCAAGGAATGGGATATCTGACAAAAGTGTAGTTGTAGCTAATTGTGATAATGTTGATAATCATACTGTccaattgttgtctaacttgtGTGGTGGTGATCAGAGCGAGCTGCGGGAGGCTGAGGACAAGTTCAGGAAGGCTATGATCGGAAATGCGCAGCTGGACAACGAGAAGTGTGCCGTAGTCTACCAAGTGGAGCTGTACAAGGACCGACTGGAGGAGCTCGGGGAGGAACACGCCCAGCTTCAGAGGGAACATAGAGAGAAGTGTCGTCAGTACGAACAGATGAAGAGGGACTCGGACAAACTGGCCAAAGAGCTGGAGGCTGTCCTCGCCGCTCTCCAAGAACGAGACCGCCTCATACAGGAACATGGTCTGGTGATTGTTGGAGGAGACAGTTCGTCGCCAAGCACGGACGAGGAGAGCAGCGAAGAGGAACGACCCAAGAAACGACGGGAGCAGGAGCGACACAAGAAGGCCCTAGTTTCTGTGGAGGGTGCTAATCTCTTGGCCTCCGTGGCCGGATCACTAGATGTTCGGTTAAAGAAGTTAGCAGCGGAAAGGAACGAGCTCTCTGACGAACTTCGACATGTTAAGTTGGAACTGGAGGAAGAAAGATCTCGAGGTCGCGGTCTTGGTGCCATGTCGCCTGACCTCGAGGATGTACAGAgagAAGCTAATAAACAAATTGGAGATTTAAAATTCAAACTTCAAAAAGCGGAACAAGACAATTCTACTCTTCAGGCCACAGTGGCTCGACTGGAGGGCCAAGTGTCTCGCTATAAAACAGCCGCTGAAACATCAGAAAAAATGGAGGATGAACTCAAATTGGAAAGGCGGAAACTTCAGAGGGAGTTGCGGGAGTGTCAGGCTCGTCTAGAGGAGTTGGAAACATCCAATACACACCTCCAGAGACGGCTGGACAAACTGAAAACGGCCAAGTCAGCTCTCCTCAAAGACTTGTAG
- Protein Sequence
- MESESEEPSDGSVSGESEESSSLSSSDVVEEAPADEDTSVEEEDEGSGSKDEEEGPRNGISDKSVVVANCDNVDNHTVQLLSNLCGGDQSELREAEDKFRKAMIGNAQLDNEKCAVVYQVELYKDRLEELGEEHAQLQREHREKCRQYEQMKRDSDKLAKELEAVLAALQERDRLIQEHGLVIVGGDSSSPSTDEESSEEERPKKRREQERHKKALVSVEGANLLASVAGSLDVRLKKLAAERNELSDELRHVKLELEEERSRGRGLGAMSPDLEDVQREANKQIGDLKFKLQKAEQDNSTLQATVARLEGQVSRYKTAAETSEKMEDELKLERRKLQRELRECQARLEELETSNTHLQRRLDKLKTAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -