Adep014020.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- bab1
- Assembly
- GCA_963662175.1
- Location
- OY759216.1:23237780-23259365[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-16 5.9e-13 49.7 0.0 1 43 55 98 55 100 0.95 2 2 3.6 5.4e+03 -1.4 0.2 5 18 226 239 225 240 0.85
Sequence Information
- Coding Sequence
- ATGTTGGAGTCTTCACATGCCTGGTTGGGCGCATCCACATCTTCTTTAGCGGCAGACAGCTACCAGTATCAGCTGCAGTCGATGTGGCAGAAGTGTTGGAACACCAATCAGAGTCTGGTTCACAATCTGAGGTTCCGGGAGCGAGGTCCACTCAAGTCGTGGCGACCGGAGACTATGGCGGAGGCCATCCTGAGTGTACTGAAGGAGGGTCTTAGTCTGTCCCAGGCCGCCCGCAAATATGACATACCTTATCCTACCTTCGTTCTGTACGCCAACCGCGTACACAACATGCTTGGACCCAGCGCTGATGGCGGATCAGACCTGAGGCCGAAGGGACGAGGACGACCCCAGAGGATCCTGCTGGGCATCTGGCCTGAGGACCATATCCGAGGAGTAATCCGGGCTGTTGTCTTCAGGGATCCTCAGCACATGAAGGACGACACACTCAACCTAGGATATCATCGCATACCTAAGCCGCAGCTCTGCACTCCGGACAGTGTGCACAGCTACGGGGGCGGAAGTGGCTCAGCAGGCTCGGCTGGCTCAGCTGCGGACTCAGTATCGCCCAACTCGGCCGCAGCCGCTGTCGTGGCGGTGGCCCAGAACCTGAGGCAGCAGATGCTGGCAGCTGCACACCATCCTCATGAGCCGGCCCACCCCCAGTTCGGCGGATTTCTGGCTGCGGCGGCTGCTCATTGTGGGAATGGTGCCGCATCCCTCATGCTTCACTCCCCCAGCCCTGTTGATTCGTCACCTCGTTCGTCGCCACTCACACAGCCCAACAACAACATGGAGATGGCAATGAGTATGGGCTATAAACCTATGATGAACGACTCGATGACATCTTCAAGGAATGACCACTTATCGTTTCAAGACGAAATCGAAGACTTAGTCAAAAGACCACAATCCAGCGAAACACCCAAAATTAagcCACAACCGATGCTGTTCAAGTCAATACCGAACGATCTGTCCACGCGGGCGGACCACCTGTTTCAGGACGAGATGGACCTCATGAAGCGTCCTCCTCAGCCTCCTGAACCCTCTAAAGTCAAGGTTGGGATTGGTGTGAGCGGAATGGCGTACAAACCTTGCGAAGGGTACGGACCTCCTCGTCCTGAATCGTTACTTCAGGAAGATTTCGAAGATTTGGTCAAAAGTCCACCACCACAGTCGCAAAAAGAACCAATTCACATGTCTGTGGAACAGCGCTCCGACTAA
- Protein Sequence
- MLESSHAWLGASTSSLAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAILSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGIWPEDHIRGVIRAVVFRDPQHMKDDTLNLGYHRIPKPQLCTPDSVHSYGGGSGSAGSAGSAADSVSPNSAAAAVVAVAQNLRQQMLAAAHHPHEPAHPQFGGFLAAAAAHCGNGAASLMLHSPSPVDSSPRSSPLTQPNNNMEMAMSMGYKPMMNDSMTSSRNDHLSFQDEIEDLVKRPQSSETPKIKPQPMLFKSIPNDLSTRADHLFQDEMDLMKRPPQPPEPSKVKVGIGVSGMAYKPCEGYGPPRPESLLQEDFEDLVKSPPPQSQKEPIHMSVEQRSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00715020; iTF_01309290; iTF_00165136; iTF_01298289; iTF_00757239;
- 90% Identity
- -
- 80% Identity
- -