Basic Information

Insect: Aquatica leii
Gene Symbol: RREB1
Assembly: GCA_035610365.1
Location: CM069432.1:83273103-83277999[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00096 0.23 14.6 0.5 1 23 62 84 62 84 0.96

2 15 0.0011 0.27 14.4 0.2 1 23 97 119 97 119 0.97

3 15 0.00037 0.088 15.9 4.6 1 23 125 147 125 147 0.98

4 15 0.008 1.9 11.7 0.9 2 23 257 279 257 279 0.95

5 15 0.053 13 9.1 0.5 1 20 327 346 327 348 0.95

6 15 0.082 20 8.5 0.1 1 23 480 502 480 502 0.96

7 15 1.5e-05 0.0036 20.3 0.8 1 23 511 533 511 533 0.99

8 15 0.0015 0.36 14.0 3.1 1 23 539 562 539 562 0.97

9 15 0.00054 0.13 15.4 1.4 1 23 974 997 974 997 0.96

10 15 0.002 0.49 13.6 0.4 2 23 1232 1253 1231 1253 0.97

11 15 0.23 55 7.1 6.3 1 23 1259 1282 1259 1282 0.97

12 15 0.023 5.5 10.3 1.2 1 20 1310 1330 1310 1331 0.95

13 15 0.53 1.3e+02 6.0 1.1 1 23 1398 1421 1398 1421 0.92

14 15 0.03 7.3 9.9 0.4 3 23 1469 1489 1467 1489 0.93

15 15 0.014 3.2 11.0 7.8 1 23 1495 1517 1495 1517 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00096	0.23	14.6	0.5	1	23	62	84	62	84	0.96
2	15	0.0011	0.27	14.4	0.2	1	23	97	119	97	119	0.97
3	15	0.00037	0.088	15.9	4.6	1	23	125	147	125	147	0.98
4	15	0.008	1.9	11.7	0.9	2	23	257	279	257	279	0.95
5	15	0.053	13	9.1	0.5	1	20	327	346	327	348	0.95
6	15	0.082	20	8.5	0.1	1	23	480	502	480	502	0.96
7	15	1.5e-05	0.0036	20.3	0.8	1	23	511	533	511	533	0.99
8	15	0.0015	0.36	14.0	3.1	1	23	539	562	539	562	0.97
9	15	0.00054	0.13	15.4	1.4	1	23	974	997	974	997	0.96
10	15	0.002	0.49	13.6	0.4	2	23	1232	1253	1231	1253	0.97
11	15	0.23	55	7.1	6.3	1	23	1259	1282	1259	1282	0.97
12	15	0.023	5.5	10.3	1.2	1	20	1310	1330	1310	1331	0.95
13	15	0.53	1.3e+02	6.0	1.1	1	23	1398	1421	1398	1421	0.92
14	15	0.03	7.3	9.9	0.4	3	23	1469	1489	1467	1489	0.93
15	15	0.014	3.2	11.0	7.8	1	23	1495	1517	1495	1517	0.98

Sequence Information

Coding Sequence: ATGGAGTTGTCGTCAGAGCTTGAATCGAAAGCCAAAGAATATTTAAGAAACCAAAGCAATCGAAGTGATTCCGGCATATTATCAGGAACTGGTAGTACTACGTTTTTAGATATGGATCGATCCAATCGTTCGGAAAACGAAGATACAGATAATCGCAGCAATAATAGTTCACCCGATCGCAAATATTTATGTCCAATTTGCGAAATCATGCTAACGTCGCAGCATGAATTCACAATCCATATCAGATCTCACAATAATCAAACGGAAGTACAAGAATCAGAAAAAGGCTTCGCATGCCGTATATGTTTTAAGGTACTAAGTTCCAGCGCCAGTTTAGATAGACATATGTTAATACATAGCGGCGAGAGACCTTTTACATGCAAATATTGTAGGGATACATTTACAACTAACGGAAATATGCACAGACATATGCGAATACACACTCTTAAAAGTGAAAACTACGAATCTGACGAAAGCACCGATAGCGGGAAAAGTAACAAATCAAGAATGGaatacaacaataataaaattagtacaaAAAGCGAAGATCATaaaaacaacttatttaaaactaaagccGACGGTAAACGTAAACTCTCGGACAACAATTGCGAGCAACCTTATAAAATAGCTCGAATCAAGTTAGAAGATGCttttaacgaaatggaacaacaAATCTTTAGCTGTTCTGTATGCGAACGTGACGATTTTAACACGATCGAAATGCTTCAGATTCACTTAGAAGACAATCACCCTGATTATCCAGCACAATGTGACAAATGCACTCAatcgtttaaaaacattaaacttttaaacgaACATAAAATTATGGTTCACGTTAATGAAGataaatttcaaagaaattcaGTTGTTGGTTTTAAAGATTTAACGTTTGTCGATTTTTCAAGCCAGAAATTTCCTTATATCGCAAAATACGAATGTGAAAAGAATTTGCACAAAGTAGCAAGCGGTTTAAGATTTCAATGTGATAAATGCTCACGTGCATTTCCTTGCGCTAGTTCTCTTGAAATACATCAATCCGATTGCACCGTAGGCTTAAATCTTTCTATTAAAGATTctttaacaaataatacaaacgTCGAAAAAGATTTAAGACGAAAcgatttttttgctaaattagaTTTGCAAAATAACTCTGCATTAAAACGTGAATATTTACAAATTCACGATAAACTAATTCGACCGTCTTCTCAAATGCTATCATCTTCCGACGGCAAGGATTTGGCAGATATACAATCTATATTATCAATGACAACGAACGGTACTTTATTACaacaattacaaactaaatCTAATGATTTACATCCTGTATTAAGATCTTACAGTGAAAGTGAAGATAATCCAAAGcaagaaaatgaagaagaatcCCAAGATTTCTTTGCTGCTGAGTTTAGAAAAATGAAAGTACGCGGAGAATTTCCTTGCCGTCTTTGCAAAGCAGTTTTTCCAAATTTACGAGCTCTAAAAGGCCACAATCGTGCGCATCTAACTGGAAATAACAACGGTACATACCGATGCAACATGTGCCCGCATTCATCTATAGACAAAGCAGCGCTAATACGGCACATGAGAACTCATAATGGAGATCGCCCTTATGAATGTTCTTTGTGCAACTACGCATTTACAACAAAAGCTAATTGTGAACGACATTTAAGAAATAGGCACGCTAAAAGCACCAGAGAAgaagttaaaaaatcaataatttatcaTCCTTCCGAAGATCCCAGCAATGAAGAAATAAGCAAAATGTTAGCACgcgaagaaaaatttaatttacctaAAGACACAAGCATTcaagaaactttaaaacaagaaacttaccTTTCAACGCCTGATCTTACTAATTTGTTACCTGAAAAAGTTAAAGACAATACTGTTGATTTGaatatattaaatttgcaaacaaattcacattataaatataacaatCTACAAGACAttaacaaaatagaagcaaaagAATTAGCGCGAAACGAAACAATACGGACAAAAGAAAATACGACTTCTACAATCGATCATTTGCCGCCATATGTGCCGCCATTTAATTTTTCTCCAAAAATTACCAACGTGTCTACTCCTCAAAAAAGTTCAATAaaaatcaatgtaaaaaatttagaatcgTTGCAAAAAACTTATGATAATGATCAATGTTTTGACAAAACTGAAGAATCTTATGAAATCGACATTAAAGAGGAGCCAATTGATATGGTACTAGATTTAAGTACGAAAAGAACTGAACCTCTTCCGGAAAGAAGTAACATTGACGTAGAAGACTTGCCAcaagatttatcaaaaaaaaacattgaagaaTCTCCTCAAAACATGAGTGAAATATTAGCAAGACAACTTCTTAAAAACACACCAAAAATTGACCCAGCGGGATTATACGCTTCTCAATTAGCTTTTTATAGAAACGGATTTCCTGGATTACCAGGTTTGCCTGCTTGGCCTTTTCAGTTAAATCCGTTATTTTTTCAATCGATTCCATCTCCGTTATTACCACAAGATCCACAAGAAATTAAAGAACGATTACAAAGGTTACAATTGTGCGGTGGTGGAATGGTAATGGATAATTTTACCGAGCgacttaaaaattttcatcaGCAATCATTTGCTAATCCAGCATTAAACgcgtataataattttaagctaaataattctaaaaacgaCTTAAATTCTCACGATGGCAGTTTTCAAAATTCTGTTAAAAATGATGATATAAAACCGCTTAGTCTTTCTGTAGAATCAAATTTATCagatagtttaataaaaatgcaaagtCCTATTTCTACATCAAAACCGGATCAAATTGGCTCTCCAAACTCTGTTAAGATGGTTATAAAAAATGGGGTCTTAAtgccaaaacaaaaacaaagaagataTCGTACAGAAAGACCATTTTCTTGTGAGTATTGCTCAGCAAGATTTACTTTGCGGTCTAACATGGAACGTCATATTAAGCAACAACATCCACAATATTGGTCTCAACGCCAAAGAACTAATATTGGAGGTAGCAACCGTAAATCAAGTGGTTCGGGTCatcgtaataattttaacaacataAGCATACCAACTTACGACTCACAAATTAAAACCGAATACGATGATATAAAAGATAATCATATTACTGAAAAAATGAAATACGTTATATTAGCACACCATTTAAAAACTAGTCAAAATTACAAAGGTACGTCaaataaacacattaaaattaacGAAGACGAAGAAGACTATCCCTTAGTTATTGATGAAAAAGACGacgctataaacaaaaatgaaaatgttttaagttcGAAGGAAGTTGATGTGCATATtactaataacaataacagTCAAATTGTagacaaaacagaaattaaagctGAGAATTCCGAATCAGACAATTATCAATCtacaaatcttacaaaaaacgaAGATGCTCAAGATTTAGTACCTGTGTCTCGATTACTAGACAATGCTTCTCAACAACCATTTAAAGAGTATTTTCGCAGAGAAGCTGAAAATCGTGAAGGTGGAATAAGtgaagaagatgaagaagggTTGGTTGCCAGTAGCAGTACAAGTGATGGAAACAATTCCGGAACAGACGAAAATAAatccGAATGTGAAAATGCCGCTTCTCAAATCCCTGCTAAGAAAAAATCTGCTTATTCGTTAGCACCGAATCGCGTAAGTTGCCCGTACTGTCAACGTAAGTTTCCATGGACGTCATCGTTACGAAGACACGTATTAACACATACCGGACAAAAGCCTTTTAAATGCAGTCACTGTCCTTTACTTTTTACTACAAAATCAAATTGCGATCGCCATTTACTTCGCAAACACGGAAATTCTGCAAGTGCCATTAATAACGATGTCTCTAATAGCAATTCAAATTACATGATGCGAAATGTACCAGAACGACCGTTTAAGTGCTCTAATTGTCCTAGCAGTACGTTTTCaacttattcaaatttaaaaaaacatattagcTGCAAGCATTCTTTCCAAGGTACCCAAAGTGATGACGCACGGTCGCAAATATCAACGGGTTACGAAGCTGGTAGCTCAGAAGATGAAAAAACTCCGCAAACTGATCAAAAAAAAGAGTGGGATAAACAAATTATGACTCATAATAAGTCGACTAGTGCAGAAGCACAAAATTCACATTTGCAAAACTCCGAATTGCCATTTAAGTGCCATTTATGTGACAGTTCATTTGGAGAAAGGAACGACGCTTTAGATCACATAAAAGATAAGCACTGTTCAGAATATAAACTTCTTTTATCTAAGAACGCTCTCGATGCTAACGCAACTACACCTGATGACAATCCTAATCATGATGACAACGAAGAGAATGAAGTTCGGGGAAAGTTTCCGGACTACGCTAATAGAAAAGTTATATGTGCTTTTTGTATGCGACGTTTTTGGTCTGCAGAAGATTTAAGAAGGCATATGAGAACTCACACAGGAGAACGACCTTTTAGTTGTGATATTTGCCATCGAAGATTTACATTAAAGCATAGCATGTTAAGACATCGTAAGAAACATAATGTTACATTTGATATTGATAACTTAAACAGCGACGAAGATGTAAACAACATGAACATATCTACGTTTAATAAGTTTATCAAAGGTAACAACAACAACTCGGTAAGTAAGGTTCTTGATAAAACTGACGAATCCGATGGTGCAGAAGGTAGTGatttgataagtaatttattaggAATTAGAGATCGTTCTATTATTGATCAAGTATTAACCTCTTCTGCTGATGACGCTGCTAAATTATTGGGCGTTAAAGGTGGCGATCACGAATAG
Protein Sequence: MELSSELESKAKEYLRNQSNRSDSGILSGTGSTTFLDMDRSNRSENEDTDNRSNNSSPDRKYLCPICEIMLTSQHEFTIHIRSHNNQTEVQESEKGFACRICFKVLSSSASLDRHMLIHSGERPFTCKYCRDTFTTNGNMHRHMRIHTLKSENYESDESTDSGKSNKSRMEYNNNKISTKSEDHKNNLFKTKADGKRKLSDNNCEQPYKIARIKLEDAFNEMEQQIFSCSVCERDDFNTIEMLQIHLEDNHPDYPAQCDKCTQSFKNIKLLNEHKIMVHVNEDKFQRNSVVGFKDLTFVDFSSQKFPYIAKYECEKNLHKVASGLRFQCDKCSRAFPCASSLEIHQSDCTVGLNLSIKDSLTNNTNVEKDLRRNDFFAKLDLQNNSALKREYLQIHDKLIRPSSQMLSSSDGKDLADIQSILSMTTNGTLLQQLQTKSNDLHPVLRSYSESEDNPKQENEEESQDFFAAEFRKMKVRGEFPCRLCKAVFPNLRALKGHNRAHLTGNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKSTREEVKKSIIYHPSEDPSNEEISKMLAREEKFNLPKDTSIQETLKQETYLSTPDLTNLLPEKVKDNTVDLNILNLQTNSHYKYNNLQDINKIEAKELARNETIRTKENTTSTIDHLPPYVPPFNFSPKITNVSTPQKSSIKINVKNLESLQKTYDNDQCFDKTEESYEIDIKEEPIDMVLDLSTKRTEPLPERSNIDVEDLPQDLSKKNIEESPQNMSEILARQLLKNTPKIDPAGLYASQLAFYRNGFPGLPGLPAWPFQLNPLFFQSIPSPLLPQDPQEIKERLQRLQLCGGGMVMDNFTERLKNFHQQSFANPALNAYNNFKLNNSKNDLNSHDGSFQNSVKNDDIKPLSLSVESNLSDSLIKMQSPISTSKPDQIGSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEYCSARFTLRSNMERHIKQQHPQYWSQRQRTNIGGSNRKSSGSGHRNNFNNISIPTYDSQIKTEYDDIKDNHITEKMKYVILAHHLKTSQNYKGTSNKHIKINEDEEDYPLVIDEKDDAINKNENVLSSKEVDVHITNNNNSQIVDKTEIKAENSESDNYQSTNLTKNEDAQDLVPVSRLLDNASQQPFKEYFRREAENREGGISEEDEEGLVASSSTSDGNNSGTDENKSECENAASQIPAKKKSAYSLAPNRVSCPYCQRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSASAINNDVSNSNSNYMMRNVPERPFKCSNCPSSTFSTYSNLKKHISCKHSFQGTQSDDARSQISTGYEAGSSEDEKTPQTDQKKEWDKQIMTHNKSTSAEAQNSHLQNSELPFKCHLCDSSFGERNDALDHIKDKHCSEYKLLLSKNALDANATTPDDNPNHDDNEENEVRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNVTFDIDNLNSDEDVNNMNISTFNKFIKGNNNNSVSKVLDKTDESDGAEGSDLISNLLGIRDRSIIDQVLTSSADDAAKLLGVKGGDHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00004045;
90% Identity: -
80% Identity: -