Basic Information

Insect: Abscondita terminalis
Gene Symbol: RREB1
Assembly: GCA_013368085.1
Location: JABVZW010001073.1:157272-163336[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00065 0.033 14.8 0.5 1 23 88 110 88 110 0.96

2 15 0.00032 0.016 15.8 0.4 1 23 123 145 123 145 0.98

3 15 1.2e-05 0.0006 20.3 3.4 1 23 151 173 151 173 0.98

4 15 0.002 0.1 13.3 0.9 2 23 283 305 283 305 0.95

5 15 0.23 12 6.8 0.5 1 20 353 372 353 374 0.93

6 15 0.066 3.3 8.5 0.1 1 23 505 527 505 527 0.96

7 15 1.2e-05 0.00061 20.3 0.8 1 23 536 558 536 558 0.99

8 15 0.0012 0.062 14.0 3.1 1 23 564 587 564 587 0.97

9 15 0.00043 0.022 15.4 1.4 1 23 993 1016 993 1016 0.96

10 15 0.0016 0.083 13.6 0.4 2 23 1248 1269 1247 1269 0.97

11 15 0.18 9.3 7.1 6.3 1 23 1275 1298 1275 1298 0.97

12 15 0.062 3.2 8.6 1.1 1 20 1326 1346 1326 1347 0.94

13 15 0.42 22 6.0 1.1 1 23 1415 1438 1415 1438 0.92

14 15 0.024 1.2 9.9 0.4 3 23 1486 1506 1484 1506 0.93

15 15 0.011 0.55 11.0 7.8 1 23 1512 1534 1512 1534 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00065	0.033	14.8	0.5	1	23	88	110	88	110	0.96
2	15	0.00032	0.016	15.8	0.4	1	23	123	145	123	145	0.98
3	15	1.2e-05	0.0006	20.3	3.4	1	23	151	173	151	173	0.98
4	15	0.002	0.1	13.3	0.9	2	23	283	305	283	305	0.95
5	15	0.23	12	6.8	0.5	1	20	353	372	353	374	0.93
6	15	0.066	3.3	8.5	0.1	1	23	505	527	505	527	0.96
7	15	1.2e-05	0.00061	20.3	0.8	1	23	536	558	536	558	0.99
8	15	0.0012	0.062	14.0	3.1	1	23	564	587	564	587	0.97
9	15	0.00043	0.022	15.4	1.4	1	23	993	1016	993	1016	0.96
10	15	0.0016	0.083	13.6	0.4	2	23	1248	1269	1247	1269	0.97
11	15	0.18	9.3	7.1	6.3	1	23	1275	1298	1275	1298	0.97
12	15	0.062	3.2	8.6	1.1	1	20	1326	1346	1326	1347	0.94
13	15	0.42	22	6.0	1.1	1	23	1415	1438	1415	1438	0.92
14	15	0.024	1.2	9.9	0.4	3	23	1486	1506	1484	1506	0.93
15	15	0.011	0.55	11.0	7.8	1	23	1512	1534	1512	1534	0.98

Sequence Information

Coding Sequence: ATGCAAGGTATTGTTTACATGCCTGATGGTCAAATTCAGACAGGTTCGTCGCCACCTCACAGGAATAGCGTTCCTCAAACGAACATGGAGTTATCGTCAGAGCTAGAAACTAAAaccaaagaatatttaaaaaaccaaagtaatCAAAGTGATTCAGGTATATTATCGTGTACTGGTAATTCTACACTTATGGACCCTTCCAATCGTTCCGAAAACGAAGATACAGATAACCGAAGCAATAGCAGTTCGCCCGATCGAAAATATTTGTGTCCAATTTGCGAAATCATGCTAACGTCGCAGCATGAATTCACTGTCCATATCAGATCTCACAATAACGAAACGGAAGTGCAGGAATCAGAAAAAGGCTTCACATGCCGTATATGCTTTAAGGTACTAAGTTCCAGCGCAAGTTTAGATAGACATATGTTAATACATAGTGGCGAGAGACCTTTTACATGCAAATACTGTGGGGATACATTTACTACTAACGGAAATATGCACAGACATATGCGTATACACActcttaaaactgaaaattacgAATCTGACGAAAGCACCGATAGCGGAAGCAGTAATCGATCAAGAATGGAgtacaacaacaataaaattagtacaaaaaacgtagataataaaaacgactTATTTGAAACTAAAACCGACGGTAAACGAAATCTATCCGACATCGATTGCGAAAGGCCACACAAAAAAGCtcgaattaaattagaaaatgcaTTTAACGAACTCGAAGAACGCACTTTTAGTTGTTCCGTATGCGAACGCGACGattttaatacaatagaaaTGCTACAATACCACCTAGAAGACAATCACCCTGATTATCCGGCGCAATGCAGCCAATGCACCCAAACGTTTAAAAACGCCAAGCTTTTAAACGAacacaaaattatggtacacgTCAACGAAGacagatttcagaaaaattCCGTCGTCGGTTTTAAAGATCTAACTTTTGTTGACTTTTCGAGTCAGAAATTTCCTTATATTGCTAAATATGAGTGCgagaaaaatttgcataaagtATCAACCGGCTTGAGATTTCAGTGCGATAAATGTTCACGCGCCTTTCCATGCGCCAGTTCTCTCGATATACACCAATCCGATTGCACAGTCGGCCTAGACTTATCAGTAAAGGATACGTTGAACAAAAATTCGGGCATAGAAAAAGATTTACGACGAAACGACTTTTTTGCCAAATTagatttgcaaaataattcgGCTTTAAAAAGGGAATACATTcaaatgcaagaaaaattaaatcgacCACCGTCTCACATTGTACCATCTTCCGACGTTAAAGATTTGGCGGATATTCAATCCATACTATCTATGACAACAAACGGTACtttattacaacaattacaatcaaaaaatgaCCCACATTCGGCGTTACGGGCCTACAACGAAAACGAGGATAGTCAAAAACATGAAAACGAAGAAGAGTCTCAAGATTTTTTTGCGGCcgaatttagaaaaatgaaagtgCGCGGAGAATTTCCTTGTCGTCTTTGCAAAGcggtttttccaaatttaaggGCATTGAAAGGGCATAACCGCGCACATTTAACTGGAAACAATAATGGGACGTACAGGTGTAACATGTGCCCCCATTCATCCATAGACAAAGCAGCTTTGATCCGACACATGCGGACCCACAACGGTGACCGTCCTTACGAATGTTCTTTGTGTAACTACGCGTTTACAACAAAAGCTAATTGTGAACGTCACTTACGAAATCGACACGCTAAAAGCACCCGAGAAGAAGTAAAGAAATCTATTATATATCATCCCTCGGAAGACCCTAGCAATGAAGAAATAAGCAAAATGTTAGCCcgagaagaaaaattaaacctaaCAAAGGAACCGGAACATCCAAAACCCGAAAACTACCTCACAACACCCGACTTAACTAATTTACTACCTGAAAAAATCAAAGACGTCTCCGTAGATATGAATTTgatgaatttacaaaataatccGCATTATAACTATAACAGTCAGCACAGTATTACCAAATTGGATGAAATAACGCGCAGCGAAAGTGTACGACCAAAAGGAAACACTACTCCAACATCCGATCACATTGCTCCATACGCACCTCCGTTTAATTTTTCTCCGAAAATAACAAACGTATCTACACCGCAACAGCCtccattaaaaattaacgtgaagaatttagaaatgttGCAAAGTAGTTACGAGAGCAGCAAAAGTTATGACAAAACCGACGAATCTTACGAATCGGATGTGAAGGAAGAACCGATAGCGTTGGATTTAAGTACAAAAAGAACTGAACCCGTTCTCGAAACAAACAAAGTTGAGTTAGAAGAAGACGCTCCACAAGATTTGTCGAGGAAAAATATGGAACAACCTCCGCAAAACATGACTGAAATATTAGCTagacaacttcttaaaaatacaCCAAAGATCGACCCGGCCGGATTATACGCTTCCCAATTAGCATTTTACAGAAACGGATTTCCGGTATTGCCAGGATTGCCAGCTTGGCCGTTTCAATTAAATCCGTTATTCTTTCAATCTATTCCGTCACCTTTGATGCACCAAGATCCTCAAGATGTGAAAGAACGTTTACAAAGGTTGCAGTTGTGCGGCGGCGGAATGGTTATGGATAATTTCGCCGAACGTCTCAAAAATTTTCATCAGCAACCGTTTGCAAATCCTGCACTAAGTgcttacaacaattttaaattaaataactctaaaaatgaattaaaccCGCACGAATCCGTTTTTCCAAATTCGGTAAAAAATGAAGATATGAAACCGCTTACTCTTTCCGTCGAACCAAATTTATCGGAAAATTTGGTGAAACTACAAAGTCCGATTTCTACATCCAAATCTGATCAAATGGGTTCTCCCAACTCAGTTAAAATGGTTATCAAGAATGGAGTTCTAATgcctaaacaaaaacaaagaaggTATCGTACAGAACGACCGTTTTCTTGCGAATATTGTTCCGCAAGATTTACGTTACGTTCCAACATGGAACGTCACATAAAACAACAACACCCACAATATTGGTCTCAACGACAAAGAAGTAACATTGGAGGCGGAAATCGCAAATCAAGCGGCTCaaacagaaacaattttaacaacataaatattCCAAGTTATGATTCACAAATGAAAACCGAATACGATGACATGAAAGATAATCATATAAGCGACAAAATCAAATACGTTATATTAGCCCAGCACTTAAAAGCTAGTCAGAACTACAAACCCGGAAGCaacaaacacattaaaaatcatGAAGACGAAGAAGATTATCCGTTAGTTATAGACGAGAATGACGATTCAGCAACCAAACAcgaaaatttaatgaaagaaCGAGACATTCACGATGAGGTTTCTGACAACAACAACGGCCGAAATTTGGATCAGATGCATGTTGAAAACTCCGAGTCGGATAATAACAAACCAAGTAACCttataaaaaacgaagaagCTCAAGATTTAGTACCTGTATCCCGATTATTAGACAACGCGTCTCAACAACCATTCAAAGAGTATTTTCGTAGAGAAACAGAGGGTCGTGAAGGAGTCATTAGCGAGGAAGATGAGGAAGGTTTAGTTGCAAACAGCAGCACAAGCGACGGAAACAATTCTGGAACCGACGAAAACAAatcTGAAGGTGAAAACAACACTTCTCAAATTCCTGCTAAGAAAAAATCCGCTTATTCGTTGGCACCAAATCGTGTAAGTTGCCCGTATTGTCAACGTAAATTTCCATGGACTTCATCTTTACGAAGACACGTATTAACGCATACTGGACAAAAACCATTCAAGTGTAGCCATTGTCCTTTGCTCTTCACCACAAAATCAAATTGCGATCGTCATCTGCTTCGTAAACACGGAAATTCCGCAAGTGCCATTAATAATGAAGCATCTAACTGCAATTCGAATTATATGATGCGAAATGTACCAGAGCGACCGTTTAAATGCTCTAGCTGTCCCAGCAGCACATTCTCTACTTACTCTAatcttaaaaaacatattagttGTAAACATAATTTCCAAGGGACTCAAAGTGACGATGCGCGTTCGCAAATATCAACCGGTTACGAAGCTGGTAGTTCCGAAGATGAGAAAATGCCTCAACCCGATCATCAGAAAAAAGACTGGGATAAACAAACCGTAGCACATAACAAATCAAGCGGGATTGAAGTAGCAACTTCGCATTTGCAAAATTCGGAATTGCCATTTAAGTGCCATTTGTGCGATAGTTCGTTTGGGGAAAGGAACGACGCTTTAGATCACATAAAAGATAAACACTGTTCGGAATATAAGTtacttttatctaaaaatgCTCTCGATGCTAACGCAACAACACCAGACGACAATCCCAATCACGATGACAACGAAGAAAATGAAGTCCGAGGAAAATTTCCAGATTATGCCAATAGAAAAGTTATATGTGCGTTTTGTATGCGACGTTTTTGGTCGGCCGAAGATTTAAGACGTCACATGAGAACTCATACTGGAGAAAGACCATTTAGTTGTGATATTTGTCACCGTAGGTTTACTTTAAAACATAGCATGTTAAGACATCGTAAAAAACATAACGTTACATTCGACATTGACAACTTAAACAGCGATGAAGACGTCAACAACACAACCACAACATATAACAAGTTTATCAAAGGTAACAACAACAACTCGGTAAGTAAGATCCTCGATAAAACCGATGAATCCGATGGTGCAGAAGGTAGCGATTTGATAAGTAATTTATTGGGAATTAGAGATCGTTCTATTATTGATCAGGTATTAACCTCGTCCGCTGACGACGCTGCTAAATTATTGGGCGTGAAAGGTGGTGATCACGAATAG
Protein Sequence: MQGIVYMPDGQIQTGSSPPHRNSVPQTNMELSSELETKTKEYLKNQSNQSDSGILSCTGNSTLMDPSNRSENEDTDNRSNSSSPDRKYLCPICEIMLTSQHEFTVHIRSHNNETEVQESEKGFTCRICFKVLSSSASLDRHMLIHSGERPFTCKYCGDTFTTNGNMHRHMRIHTLKTENYESDESTDSGSSNRSRMEYNNNKISTKNVDNKNDLFETKTDGKRNLSDIDCERPHKKARIKLENAFNELEERTFSCSVCERDDFNTIEMLQYHLEDNHPDYPAQCSQCTQTFKNAKLLNEHKIMVHVNEDRFQKNSVVGFKDLTFVDFSSQKFPYIAKYECEKNLHKVSTGLRFQCDKCSRAFPCASSLDIHQSDCTVGLDLSVKDTLNKNSGIEKDLRRNDFFAKLDLQNNSALKREYIQMQEKLNRPPSHIVPSSDVKDLADIQSILSMTTNGTLLQQLQSKNDPHSALRAYNENEDSQKHENEEESQDFFAAEFRKMKVRGEFPCRLCKAVFPNLRALKGHNRAHLTGNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKSTREEVKKSIIYHPSEDPSNEEISKMLAREEKLNLTKEPEHPKPENYLTTPDLTNLLPEKIKDVSVDMNLMNLQNNPHYNYNSQHSITKLDEITRSESVRPKGNTTPTSDHIAPYAPPFNFSPKITNVSTPQQPPLKINVKNLEMLQSSYESSKSYDKTDESYESDVKEEPIALDLSTKRTEPVLETNKVELEEDAPQDLSRKNMEQPPQNMTEILARQLLKNTPKIDPAGLYASQLAFYRNGFPVLPGLPAWPFQLNPLFFQSIPSPLMHQDPQDVKERLQRLQLCGGGMVMDNFAERLKNFHQQPFANPALSAYNNFKLNNSKNELNPHESVFPNSVKNEDMKPLTLSVEPNLSENLVKLQSPISTSKSDQMGSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEYCSARFTLRSNMERHIKQQHPQYWSQRQRSNIGGGNRKSSGSNRNNFNNINIPSYDSQMKTEYDDMKDNHISDKIKYVILAQHLKASQNYKPGSNKHIKNHEDEEDYPLVIDENDDSATKHENLMKERDIHDEVSDNNNGRNLDQMHVENSESDNNKPSNLIKNEEAQDLVPVSRLLDNASQQPFKEYFRRETEGREGVISEEDEEGLVANSSTSDGNNSGTDENKSEGENNTSQIPAKKKSAYSLAPNRVSCPYCQRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSASAINNEASNCNSNYMMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHNFQGTQSDDARSQISTGYEAGSSEDEKMPQPDHQKKDWDKQTVAHNKSSGIEVATSHLQNSELPFKCHLCDSSFGERNDALDHIKDKHCSEYKLLLSKNALDANATTPDDNPNHDDNEENEVRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNVTFDIDNLNSDEDVNNTTTTYNKFIKGNNNNSVSKILDKTDESDGAEGSDLISNLLGIRDRSIIDQVLTSSADDAAKLLGVKGGDHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00153913;
90% Identity: -
80% Identity: -