Alei098773.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aquatica leii
Gene Symbol
-
Assembly
GCA_035610365.1
Location
CM069438.1:14159440-14161846[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.063 15 8.9 1.6 1 23 156 178 156 178 0.96
2 22 0.56 1.3e+02 5.9 5.5 1 23 184 206 184 206 0.98
3 22 0.015 3.5 10.9 1.7 3 23 233 253 232 253 0.97
4 22 0.00014 0.034 17.2 3.4 1 23 259 281 259 281 0.98
5 22 4.4e-06 0.001 22.0 1.1 1 23 287 309 287 309 0.98
6 22 4.8e-06 0.0011 21.9 0.2 1 23 315 337 315 337 0.98
7 22 2.5e-05 0.0059 19.6 1.7 1 23 343 365 343 365 0.98
8 22 0.0028 0.67 13.2 0.2 1 23 371 393 371 393 0.97
9 22 8.3e-06 0.002 21.1 0.2 1 23 399 421 399 421 0.98
10 22 9.9e-05 0.024 17.7 0.1 1 23 427 449 427 449 0.98
11 22 4.7e-05 0.011 18.7 3.6 1 23 455 477 455 477 0.98
12 22 2.2e-05 0.0053 19.8 3.6 1 23 483 505 483 505 0.98
13 22 1.1e-05 0.0026 20.8 2.7 1 23 511 533 511 533 0.98
14 22 6.4e-05 0.015 18.3 1.2 1 23 539 561 539 561 0.98
15 22 4.7e-05 0.011 18.7 3.6 1 23 567 589 567 589 0.98
16 22 0.00042 0.1 15.7 0.2 1 21 595 615 595 616 0.94
17 22 4.3e-06 0.001 22.0 0.8 1 23 623 645 623 645 0.98
18 22 4.9e-07 0.00012 25.0 1.0 1 23 651 673 651 673 0.98
19 22 9.2e-05 0.022 17.8 3.2 1 23 679 701 679 701 0.98
20 22 9.2e-06 0.0022 21.0 1.5 1 23 707 729 707 729 0.98
21 22 0.0014 0.34 14.1 3.3 1 23 735 757 735 757 0.98
22 22 3.2e-06 0.00077 22.4 2.2 1 23 763 785 763 785 0.98

Sequence Information

Coding Sequence
atgggtGAAAATACAACAAACAGTTGTCGAATATGTCTACAGGAAGTAGTGGAAACAgaacaatattattttcttaacgACAATCAGTTAAAGCTACAATTCAAGTTGTTGGACATTCTGCCACAAATAGACCTAAATATGACATCGAACCCAATTAGTTGTAGTCAATGTATGATGACAATTGCGGAAATATACGAATTCAAGCAACTGTGCTTGCACACTGAAACTACTATAAGGAACTTACAACAAACAATACCTTCTAATAATCTTTTAAGGTATGTTAAAGAAGAGACAATCAAAGAATCATTGCTTGAAGACATTAAAATCGAACCTTTAGATATGCAATTGATCCATGATGATTACAAGGAAACTAATACAGATGGGCTTTTATGTATTAAGGAACCTTCAGAATCAAAATCAGGTTATTGCCCGCTGCATTCTTCAACCCACACAAACAACAACTTATACCTGTGTCATAATTGTGATTATAAGACTAATGAAAAAGATAAGTTGGTCTATCATGTCATGATTCATCGAAATGTAAAACAGTTTAAATGcgatttatgtaattatttgacTCACACTAGGAGATCTTTACATAGTCACATGTTGTTGCACAAAGACTTAAAAGTGAACAATTGCAATCAAAGTGTGCATCGAGCTAGTTTAAACAAACACTTGGTGGAACTACGTCTTTGTGATGCTTGTGGATACTCTACTCGATGTAAGGATAGTTTAGAGAAGCACATCAGAACTCACAGCTCAATTAAACCGTTTGTTTGTGAAATTTGTGGGTTCTCTTCTCAAcataagaataattttaaacgaCATATGAATAGTCACAGCTTggtaaaaccgtttgtttgtaaaacttgtggGTTCTCTTTTCGAAGTGGGTGGGAGTTAAAACGTCACATAAAAACTCACAGCTCAATAAAACcatttgtttgtgaaacttgtgAAGCCTCTTTTCGAAGTTCAGGGGAGTTAAAGAATCACATGATAACTCACAGCTCAAATAAACCGTTTAtttgtgaaacttgtgggttCTCTTCTCGatataagaataatttaaagaaGCACATGATAACTCACAGCTCAGTAAAACCGTTCGCTTGTGAAATTTGTGGGTTCTCTTCTGGatataagaatgttttaaaaaaccacaTGATAACTCACAGCTCagtaaaaccgtttgtttgtgaaacttgtgggCTCTCTTTTCGAAGTGAGCGGGAGTTAGTACGTCACTTGATAACTCACAGCTTAGTAAAACcatttgtttgtgaaacttgtggAATCTCTCTTCAAAGTTCGGGGGAGCTGAAAAATCACATGATAACTCACAGCTCGATTAAACCGTTTAtttgtgaaacttgtgggttTTCTTCTCGATAcaagcataatttaaaaaagcacatGATAACTCACACCTCAGTGAAACCGTTCgtttgtgaaacttgtgggttTTCTTGTCAATATAAGAGTAATTTAAAGAAGCACATGATAACGCACAGCTTAGTAAAACcatttgtttgtgaaacttgtgggttCTCTTTTCGAAGCAGGCGGGAGTTAAAACACCACCTGATAACTCATAGCTTAGTAAAGCCgtttgtttgtgaaacttgtggAATCTGTTTACGAAGATCTGGGGATTTACAGAATCATAAGATGACCCACAGCTCAATTAAACCGTTCAtttgtgaaacttgtgggttTTCTTCTCGATACAAGCATAATTTAAAGAAGCACATGATAACTCACACCTCGGGAAAACCGTTCGTTTGTGAAATTTGTGGTTTCTCTTCTCAATATAAGAGTAATTTAAAGAAGCACGTGATAACTCAGAGCTCAGTAAAACCTTTTGTTTGTGAAATTTGTGGGTTCTCTTTTCGAAGTAGGCGGGAGTTAAAATATCACTTGATAACTCACAGCTTAGTGAAACCgtttgtttgtgaaacttgtggAATCTCTTTCTGTAGGTCGGCCGATTTAAAGAATCACATGATAACTCACAGCTCAAACAAACCGTTCAtttgtgaaacttgtgggttTTCTTCTCGATACAAGCATAATTTAAAGACTCACATGATAACTCATACTTCGGTAAAACCGTTCAtttgtgaaacttgtgggtACTCAACCCGATATCAGAGGAATTTAAAGCAACATATGAAGATTCATACCTTGGTGAAACCGTTTGTTTGTGGAACTTGTGGGTTCTCTTCTCAGCATAAGAATAATCTAAAGAAGCACTTGACAACTCACAGCGCagtaaaaccgtttgtttgtgaaacttgtgggtACTCTACTCGGTATCAGAGgaatttaaaacaacatatgAAAACTCACAGCTAG
Protein Sequence
MGENTTNSCRICLQEVVETEQYYFLNDNQLKLQFKLLDILPQIDLNMTSNPISCSQCMMTIAEIYEFKQLCLHTETTIRNLQQTIPSNNLLRYVKEETIKESLLEDIKIEPLDMQLIHDDYKETNTDGLLCIKEPSESKSGYCPLHSSTHTNNNLYLCHNCDYKTNEKDKLVYHVMIHRNVKQFKCDLCNYLTHTRRSLHSHMLLHKDLKVNNCNQSVHRASLNKHLVELRLCDACGYSTRCKDSLEKHIRTHSSIKPFVCEICGFSSQHKNNFKRHMNSHSLVKPFVCKTCGFSFRSGWELKRHIKTHSSIKPFVCETCEASFRSSGELKNHMITHSSNKPFICETCGFSSRYKNNLKKHMITHSSVKPFACEICGFSSGYKNVLKNHMITHSSVKPFVCETCGLSFRSERELVRHLITHSLVKPFVCETCGISLQSSGELKNHMITHSSIKPFICETCGFSSRYKHNLKKHMITHTSVKPFVCETCGFSCQYKSNLKKHMITHSLVKPFVCETCGFSFRSRRELKHHLITHSLVKPFVCETCGICLRRSGDLQNHKMTHSSIKPFICETCGFSSRYKHNLKKHMITHTSGKPFVCEICGFSSQYKSNLKKHVITQSSVKPFVCEICGFSFRSRRELKYHLITHSLVKPFVCETCGISFCRSADLKNHMITHSSNKPFICETCGFSSRYKHNLKTHMITHTSVKPFICETCGYSTRYQRNLKQHMKIHTLVKPFVCGTCGFSSQHKNNLKKHLTTHSAVKPFVCETCGYSTRYQRNLKQHMKTHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00154171;
90% Identity
iTF_00154171;
80% Identity
iTF_00154171;