Alei019499.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- TFIP11
- Assembly
- GCA_035610365.1
- Location
- CM069432.1:190359684-190371175[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-69 3e-64 220.0 13.9 100 275 33 205 21 205 0.97 2 2 0.11 3.4e+03 0.1 0.0 243 271 218 246 209 257 0.65
Sequence Information
- Coding Sequence
- ATGGAGACTTACCAATTTGTACGTTTATTGGAAGCTCTGACGATACGATGTTGTAGAATGCGATACGATGGCGTTGATAATTGCAATAATTGCTGtatatggAATGTTCGCGATTGTGACccgttaataaatttattagaaacgtGGAAAATGCTATTACCTCAGTGGATTACAGACAATGTATTGGATCAATTGATATTACCTCGTCTAACTACGGAAGTCAGTAATTGGAATCCTCTTACTGATACAGTTCCTATTCACTATTGGATTCATCCCTGGATTCCGTTATTAAATACTCGTCTACATAACACTGTTTTTCCaataattcaagaaaaattaGGTGACGCTCTAACGAATTGGCATCCATCGGATCGTTCGGCGAAACTAATGTTGAAACCCTGGAAAGATGCGTTACCGGAAGGGTCTTTTGTTGCGTTTTTATTAGCTCATATTGTTCCGAAATTACAGCTTTGTATGCAGTCGTTAGTCATAAATCCTCATCAACAACATTTAGatgcTTGGAATTGGGTAATGGATTGGAAAGACGTTCTGTCaacgttaaatttaactttaattttggataaacatttttttccacgTTGGTTACAAACACTTGCAATGTGGCTCAATCATAATCCAGATTATAATCAAGTTACTGATTGGTATTCCGGATGGAAGAGGATGTTGTCTGACGAATTGTTAGCTCAACCGTCAATTAaagATAATTTTCACAAAGCGTTAGAAATGATGAACAGAGCAGTAACTTCTGGTCAACAACCTGGCGCCAAAGAATTTGTTTCGTACCTCACTTCGATGGAAACAAATGCACCTCCACCTCCTCCTGCTCCACGTGTCGAGGCTTTAGCAGATGCAGTCAGAACTGCAGCGCAAATACCACAAGGCTTTAAAGATCTTCTTGCGAAACGTTGTGAAGAAAGAGGAATTTTATTCGTACCtgtacttaataaattttatgaagcCAAACAAGTATATAGGCTAGGGTCAAATGGTGTTCAAGTGTATTTTGACAGAAATGTAGTATTTTACTCACAAAATAATGGTTCGTGGTTACCTGTTTCTTTAAATAGGTTGCTGGATATGGCTTAA
- Protein Sequence
- METYQFVRLLEALTIRCCRMRYDGVDNCNNCCIWNVRDCDPLINLLETWKMLLPQWITDNVLDQLILPRLTTEVSNWNPLTDTVPIHYWIHPWIPLLNTRLHNTVFPIIQEKLGDALTNWHPSDRSAKLMLKPWKDALPEGSFVAFLLAHIVPKLQLCMQSLVINPHQQHLDAWNWVMDWKDVLSTLNLTLILDKHFFPRWLQTLAMWLNHNPDYNQVTDWYSGWKRMLSDELLAQPSIKDNFHKALEMMNRAVTSGQQPGAKEFVSYLTSMETNAPPPPPAPRVEALADAVRTAAQIPQGFKDLLAKRCEERGILFVPVLNKFYEAKQVYRLGSNGVQVYFDRNVVFYSQNNGSWLPVSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01517237;
- 90% Identity
- iTF_01517237;
- 80% Identity
- -