Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.72 1.7e+03 -3.1 0.0 20 26 9 15 6 22 0.68

2 9 0.0025 5.9 4.7 0.0 20 35 37 52 35 53 0.86

3 9 0.00023 0.55 8.1 0.0 14 34 60 79 56 81 0.78

4 9 0.0015 3.7 5.4 0.0 18 34 91 107 85 109 0.70

5 9 0.15 3.6e+02 -1.0 0.0 20 32 121 133 116 135 0.76

6 9 0.021 51 1.8 0.0 20 31 149 160 145 164 0.76

7 9 0.017 40 2.1 0.0 20 31 177 188 171 191 0.76

8 9 0.0048 12 3.8 0.0 20 34 205 219 202 221 0.78

9 9 0.56 1.4e+03 -2.8 0.1 23 27 236 240 231 246 0.67

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.72	1.7e+03	-3.1	0.0	20	26	9	15	6	22	0.68
2	9	0.0025	5.9	4.7	0.0	20	35	37	52	35	53	0.86
3	9	0.00023	0.55	8.1	0.0	14	34	60	79	56	81	0.78
4	9	0.0015	3.7	5.4	0.0	18	34	91	107	85	109	0.70
5	9	0.15	3.6e+02	-1.0	0.0	20	32	121	133	116	135	0.76
6	9	0.021	51	1.8	0.0	20	31	149	160	145	164	0.76
7	9	0.017	40	2.1	0.0	20	31	177	188	171	191	0.76
8	9	0.0048	12	3.8	0.0	20	34	205	219	202	221	0.78
9	9	0.56	1.4e+03	-2.8	0.1	23	27	236	240	231	246	0.67

Coding Sequence: ATGTTCATTCACAGCTCAGAAAAACCGTTTGTTTGTGAAATTTGTAAATTCTCTACTCGATATCGATCAAATTTAAGGATACATGAGATGATGCACAGTTTGGTAAAACCATTTGTTTGTGAAACTTGTGGGTTTTCCGCTCGACGTAAGGGGACTTTGAAGGAACACATGATGATTCACAACTCAGATAAACCATTTGTTTGTAATACTTGTGGGTTCTCTGCTCGACGTAAGAGGGCTTTAAGGGAACACATGATGATTCACAACTCCGAAAAACCATTTCTTTGTGAAACTTGTGGGTTCTCTACTGGACGTAAGCGTACTTTAAAACAACACATAATTAATCACAGCTCAGTAAAACCGTTCGTTTGTAGAATTTGTGGTTTCTCTACTCGACATCAGTCAATTTTACAGAGACACATGCTCATGCACAGCTTGGAAAAACCATTTGTTTGTGAAACGTGTGGGTTTTCTACACAACTCCAATCAATTTTACAGAGACACGTGCTCAATCACAGCGTAGATAAACCATTTGTTTGTGAAACTTGTGGGTTCTCGACTCGCCGTCGTTATAATTTAAAAGAACACTTGACGATTCACAGCTCGCTAAAACCGTTTGTGTGTGAACCGTGTGGGTACTCTACCCAACGTAAGTCTACATTAAAGAGACACATGGTCATTCACAACTCAAGAAAACCATTTACTTGTGGAACTTGTGGGTTCTCGACTCGATATAAAATCAATTTAAAGAAACACATGATGAATCACAGCTCGGTAAAAAAACGCACAGTTTAA
Protein Sequence: MFIHSSEKPFVCEICKFSTRYRSNLRIHEMMHSLVKPFVCETCGFSARRKGTLKEHMMIHNSDKPFVCNTCGFSARRKRALREHMMIHNSEKPFLCETCGFSTGRKRTLKQHIINHSSVKPFVCRICGFSTRHQSILQRHMLMHSLEKPFVCETCGFSTQLQSILQRHVLNHSVDKPFVCETCGFSTRRRYNLKEHLTIHSSLKPFVCEPCGYSTQRKSTLKRHMVIHNSRKPFTCGTCGFSTRYKINLKKHMMNHSSVKKRTV

Sequence clustering based on sequence similarity using MMseqs2