Alat003612.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aquatica lateralis
Gene Symbol
tfip11
Assembly
None
Location
Alat1.3:306413-316022[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-96 3.1e-93 310.5 14.3 1 275 399 670 399 670 0.97
2 2 0.24 5.7e+02 -2.0 0.1 243 270 683 710 675 716 0.66

Sequence Information

Coding Sequence
ATGTCTGATCAAGAATACGAAAAATTTGAAATAACAGATTACGATCTAGATAATGAATTTAATCCTAATAGGGCACGTAGAGGATTAACCAAACATCAACAAATTTATGGCATTTGGGCCGATGACAGTGATAATGAAGTTGATGATCGGCCTTCATTTAAACAAAGAGCACCTAAAAACTTTTCGGCACCAATAGGATTCGTTTCAGGGGGTGTTCAACAAGCTGGAAAGAAAGATAAAGATGTACCTGTTAAAAAGGAAGAAGATGAAGATGACACTGGAACATCAACAGTATCTTTTAAAGTTGAAAATAGTTCTAGCGATTCAGAGACTGAAAGCCAAAAACCACGTGCTGGTTTTGGTGGCATCCATAAAGTACGAAACCAGTCTACAGTTACTGAAGTTACCGGTGATATCGCAGGTTTAAGGAAGTCAAGCAGTCATATAAATCAGATGATGAAAAAAAAGGGTGTTGCTGATTGGGAGAAGCATACAAAAGGCATCGGAGCAAAGTTATTGCTACAAATGGGTTATCAGCCAGGCAAAGGGTTAGGAAAAGATTTACAAGGTATTTCTGCTCCTGTAGAAGCTTACTTGAGAAAAGGACGTGGGGCAATCGGAGCTTATGGACCAGAGAAATCGGCACAAGTACCTACAGTAAAAGAAAATGTAGAAGTTCTTGATGATGATGAAAAAGAACTTGAATTAAAATGGAAAAAAGGTGATACAGGCAAAAAGAAAACAAGATATTATTATAGAACGGTAGACGATGTCATTGAAAAAGGTAAACGTCCAGGAGCATTTTCAAATTCAGGACCTACAAGTGAATTAACAAAAGTTAAAGTAATTGATATGACAGGTCCTCAACAGAGAGTCTTAAGCGGTTACCATGCTCTCAGTGGTTTGAAGGCACCACCGGGTGTTGAACATTTTGAAGACGTCGTTCACAAAAAGTGTTCAAACTTTGCACTACCCGAAATTCAACACAATTTAGATTTATTAGTGAATTTGTGTGAACAGGATATAATAAATGTGGACAGGCGATCCCGATACAATCAAGATAAACTAGAAAATTTACAACACAGAGAAAAATCTCTCAATAAAATATTGGAAGATGAAGATATACAAATTTCCAATTTAAAAGACGTGCTTCAATGCGTCGATCAATTAATGGATCCCTCTCAAGGATTATCTTTAGGACAATTTGCTCAAATGTTTCGGGAGTTACAACAAAATCATTCAGAAGAGTATTACGCGTATCACCTTGGTGAATTAGCGCCTGGTCTAGTTGGACCTTTAATCACCTCAGCTTTGGCAAGTTGGTCTCCACTAGCGTATCCGAATCAATATACCGATATATTCGTTCAATGGAAGGATATCTTAGAGAAGCCTCAACAACGTGGGACTCTAGAAGGTAATAGTATGGGAATTCAGCCATATGATAGTCTCTTATGGCATACTTGGGTGCCTGTATTGAGAACGTGTGTTAGTATATGGAATGTTCGCGATTGCGACCCGTTAATAAATTTATTGGAAACATGGAAACTACTATTACCTCAGTGGATTACAGACAATGTTTTAGATCAGTTAATATTACCTCGTTTAACTGCAGAAGTCAATCATTGGAATCCTCTTACTGATACAGTTCCTATTCACTATTGGATTCACCCTTGGATACCATTATTAAATACTCGTCTACATAACACCGTTTTTCCGATAATTCAAGAAAAATTAGGAGACGCTCTAACAAATTGGCATCCGTCAGATCGTTCGGCCAAACTAATGCTCAAACCTTGGAAAGACGCGTTACCTGAAGGGTCTTTTGTGGCGTTTTTATTAGCTCATATCGTTCCAAAATTACAGCTCTGCATGCAGTCGTTAGTCATAAATCCTCATCAACAGCATTTAGATGCTTGGAACTGGGTGATGGATTGGAAAGATGTTTTGTCAACACTAAATTTAACGTTACTTTTGGATAAACATTTTTTTCCACGATGGTTACAAACCCTTGCTATGTGGCTAAATCATAATCCAGATTATAATCAAGTTACAGATTGGTATTCCGGATGGAAGAGGATGTTGTCTGATGACTTGTTGGCTCAACCGTCAATCAAAGATAATTTTCACAAAGCGTTAGAAATGATGAATAGAGCGGTAACTTCTGGTCAACAACCTGGTGCCAAAGAATTTGTTTCGTATCTCACTTCAATGGAAACAAATGCTCCTCCACCTCCTCCTGCTCCGCGTGTTGAGGCTTTGGCAGATGCAGTCAGAACTGCAGCGCAAATACCACAAGGCTTCAAAGATCTCCTTGCAAAGCGTTGTGAAGAAAGAGGAATTTTATTCGTACCTGTACTTAATAAATTTTATGAAGCTAAACAAGTATATAGGTTAGGGTCAAATGGTGTTCAGGTGTATTTCGACAGAAATGTAGTATTCTACTCACAGAATAATGGTTCGTGGTTACCTATTTCATTAAATAGGTTGCTAGATATGGCTTAA
Protein Sequence
MSDQEYEKFEITDYDLDNEFNPNRARRGLTKHQQIYGIWADDSDNEVDDRPSFKQRAPKNFSAPIGFVSGGVQQAGKKDKDVPVKKEEDEDDTGTSTVSFKVENSSSDSETESQKPRAGFGGIHKVRNQSTVTEVTGDIAGLRKSSSHINQMMKKKGVADWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAYLRKGRGAIGAYGPEKSAQVPTVKENVEVLDDDEKELELKWKKGDTGKKKTRYYYRTVDDVIEKGKRPGAFSNSGPTSELTKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDLLVNLCEQDIINVDRRSRYNQDKLENLQHREKSLNKILEDEDIQISNLKDVLQCVDQLMDPSQGLSLGQFAQMFRELQQNHSEEYYAYHLGELAPGLVGPLITSALASWSPLAYPNQYTDIFVQWKDILEKPQQRGTLEGNSMGIQPYDSLLWHTWVPVLRTCVSIWNVRDCDPLINLLETWKLLLPQWITDNVLDQLILPRLTAEVNHWNPLTDTVPIHYWIHPWIPLLNTRLHNTVFPIIQEKLGDALTNWHPSDRSAKLMLKPWKDALPEGSFVAFLLAHIVPKLQLCMQSLVINPHQQHLDAWNWVMDWKDVLSTLNLTLLLDKHFFPRWLQTLAMWLNHNPDYNQVTDWYSGWKRMLSDDLLAQPSIKDNFHKALEMMNRAVTSGQQPGAKEFVSYLTSMETNAPPPPPAPRVEALADAVRTAAQIPQGFKDLLAKRCEERGILFVPVLNKFYEAKQVYRLGSNGVQVYFDRNVVFYSQNNGSWLPISLNRLLDMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00853958;
90% Identity
-
80% Identity
-