Aruf030373.1
Basic Information
- Insect
- Aptinothrips rufus
- Gene Symbol
- -
- Assembly
- GCA_902196195.1
- Location
- CABIKL010001412.1:7881-15504[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.5 1.7e+04 -3.3 0.1 5 22 95 112 93 113 0.82 2 3 0.023 1.2e+02 3.6 2.2 20 35 368 382 361 385 0.84 3 3 7.3e-11 3.6e-07 30.9 12.8 2 36 632 666 631 677 0.88
Sequence Information
- Coding Sequence
- ATGGACACGCACGGCGCCCCGTTCACGGTCGGGTCAGGTCGTAAGATGGCGGGTGTCTCCCCCAGGAGTCAGATCACCGTCGTCAGAGGAAGGCCAGAGAACTTCCCAAAAAGACTTGGCCGTCAACCTGGTCGCAAGGGGGTCGCTTCTCGGAAAGTACAGGCTGCCAAGGAAACTGCAGCCTCGTCGAGCAATCAGGAGGTCATCGACGACAGAGCCGACTTCCTCGAGGCAACGCTCTCCTCGGTGAAGCAGTTGGTAGCCCCGCTCGGCAGCGTCGAGTGTGCAGTGGAGCGTCTGCATCAAACAGTGCCCCGCGTTCGCGGAGACAAGAGAAGAAAGTCGCTGTTCAAAAGGAGAAGGAGTAGAGTTCAAGCGGTGCTCCTCCCTGCGCCCAGGAAGAGAGCCTCTTGGTCGTCCGCCAAGACGGAGCGGCCGCAGCCCccgaggaaagaaaagaaagcctCCGAGCAGAGGCTTTCTGGCGTGCAGAGGGCGTTGAGGAGGTGGAGTGAGACTCTTCAAATCAAGTTACACAGCTCCACCCCGACAAAGGTCGCCTCCGAAGTCGAAGTTCGTTCTCCAAAGAGAAAGTCGGAAGAAAGTCCGGTAACAGTGCCGGTCGGTAGGAAGCGCAGAGCCATTAGCAGCACTGCTTCTGATGAGACCTCCCTGCACGGGAAGGGCGGCAAAAGGAGGAAGAGTTCTCTCGTCAGGGATGTTGCTactcccaccctcacccccgggGCTCAGCCGGTGTCAACGCCCGGGCCGGTGACCGTCTCTACTTCCGGGCCTGTGCCCGTCTCTACTTCCGGGCCTGTGCCCGTCTCTACTTCCGGGCCTGTGCCCGTCTCCTCTTCTGGGCCTGTGCCCGTCTCTACTTCCGGGCCTGTGCCTGCATCCACATCCGGGCCTGTGCCCGTCTCTACTTCCGGGCCTGTGCCTGCATCCACTTCCGAGCCTGTGACCGTCTCTCCTTCCGAGCCTGTGCCCATCTCTACTTCCGGGCCTGTGCCTGCCTCCACTTCCGGGCCTGTGCTTGCCTCCACTTCCGGGCTGAGTGATCCTTCTGTAATCCACGGTGTTCCGCGGGCCGCCCACGGCGAGTGCAGCCTGTCGCAgtgccgctgctggagctgccaGCCGGGGTCTCCGCTATCACGGCTGCTGTCGGAGCACGGCGTCGACAAGCTGTGCGCCGTGCTCCTGTCCCCGCTGCCCCCGGGGGGTccgccagctcgccgccgaggCAAGGCCAGGAAGAGGACGGGTGGTTTGTTGCGACGGACTGCCCATGTCTTGCCCGCGCAGGGTGCCGCCCACCGAGACGACctccaggccggggcggggtccacCCCCTCCTTCGTACAGCCCCCGGCCCGCACGCTAACCGAGCCTCAGCTTCAGACGGCAGTCAACGCATCACCTAGTTCGCGTACTCTAGTTCTCTCTCCGATCAGGAGCTCCTCAGCGCCTTTGACGCCAGCCACCCCCGCATCGGGGAGCCCCCTCGGGATGCGCACTCCGCCGCCCCTCTCGGCCTGCCGCGTCCTGGGGCCCGTGCGGGTGCGCCGCCGCAGCTCGGACCCGGACCCGCCGCACCTGTCGTGGGTGTGCATGCCGCGGTTCCTCAGCCCCCGCGGCGCGAGGGTGCGCCGGCCCTGGCAGAGGCCCGGCCAGACCTCCCGGGTGTACGTCTTCTTCAAGACCAAGTGCCGGGGCCGCGCAcgctccacgccgccgccgtcccTCCCGGGGACCAGGAAGCTCATGTCACCGTCATGTCTTCGACCCGCGCGCAGACGGATATCCGCCCGTCGCCTGGCTGTGTTCCGCTTCCCGGACGAGCtcgccgaggaggaggggatgCCGAGGAGGaggccccgcgcctcgccgcgctgcccgcggtGCCGCATCCACGGCCAGACCGCGCTGCTGCGGCAGCACAGGAGCCGCTGCCCCTTCCggacctgctcctgctgcaaGTGCGGGGCCCACAGCGCGTCCAAGCAGCAGTCCAAGGCCGACGCCACCCTGCGCGCCGTCACAGCGAGCGCTGCATCTGCTCAGAACGACTCTGATGACGACAACctgggctgtgacgtcatcgcgacgGTCTCTGACGTCATCGCTGCTGTTTCTGACGCTATCGCAACTGTATCCGACCACGCTACGGACGCGCCGGAGAGTGGTGCGGAAGACTCGCCCCGTGACGACGCCGACGCGGCCTCTGACACGGACGACACCGAGTTCGTCCTCTGCAAGGAAGAGATGCTCGACGACGAGGTGCAGCCAGGAACGCCGCTGGTCGCCTTCATGTGCAAGGACCTGCTCTCGGACGACCCGCTGGCCGGCGACGAGCACGAAGCCCAGGATGAGGACGGCGGAGATCATACATGCGTATGGTGCGGGGAGCAATTTGAGACCGCCGCCGCAGTCGAGGAGCACTCTCTCCGACACGCTGAGCCCGACGTCGACGACCAACTCGAGGCCGAGAGCACAACCCAGTCGCTCGCTGGACGACCGAAGTCCGCAACCATCTCCAAGTCTGTCCCCGGAAC
- Protein Sequence
- MDTHGAPFTVGSGRKMAGVSPRSQITVVRGRPENFPKRLGRQPGRKGVASRKVQAAKETAASSSNQEVIDDRADFLEATLSSVKQLVAPLGSVECAVERLHQTVPRVRGDKRRKSLFKRRRSRVQAVLLPAPRKRASWSSAKTERPQPPRKEKKASEQRLSGVQRALRRWSETLQIKLHSSTPTKVASEVEVRSPKRKSEESPVTVPVGRKRRAISSTASDETSLHGKGGKRRKSSLVRDVATPTLTPGAQPVSTPGPVTVSTSGPVPVSTSGPVPVSTSGPVPVSSSGPVPVSTSGPVPASTSGPVPVSTSGPVPASTSEPVTVSPSEPVPISTSGPVPASTSGPVLASTSGLSDPSVIHGVPRAAHGECSLSQCRCWSCQPGSPLSRLLSEHGVDKLCAVLLSPLPPGGPPARRRGKARKRTGGLLRRTAHVLPAQGAAHRDDLQAGAGSTPSFVQPPARTLTEPQLQTAVNASPSSRTLVLSPIRSSSAPLTPATPASGSPLGMRTPPPLSACRVLGPVRVRRRSSDPDPPHLSWVCMPRFLSPRGARVRRPWQRPGQTSRVYVFFKTKCRGRARSTPPPSLPGTRKLMSPSCLRPARRRISARRLAVFRFPDELAEEEGMPRRRPRASPRCPRCRIHGQTALLRQHRSRCPFRTCSCCKCGAHSASKQQSKADATLRAVTASAASAQNDSDDDNLGCDVIATVSDVIAAVSDAIATVSDHATDAPESGAEDSPRDDADAASDTDDTEFVLCKEEMLDDEVQPGTPLVAFMCKDLLSDDPLAGDEHEAQDEDGGDHTCVWCGEQFETAAAVEEHSLRHAEPDVDDQLEAESTTQSLAGRPKSATISKSVPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -