Aruf030463.1
Basic Information
- Insect
- Aptinothrips rufus
- Gene Symbol
- -
- Assembly
- GCA_902196195.1
- Location
- CABIKL010000861.1:12708-18327[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3e-12 1.6e-08 35.2 5.6 5 37 353 385 350 391 0.91 2 3 2.3e-13 1.2e-09 38.8 12.3 3 38 413 449 411 456 0.88 3 3 4.2 2.1e+04 -3.6 0.3 3 9 705 711 703 716 0.59
Sequence Information
- Coding Sequence
- ATGACCCCCGCTGCCtaccccacgccgcccgccgGTAGTCCGCAGAATCGACCGCGGGGTCGCCAGCGAAGAGCTACTACTCGTTTTGACAACTCGCCGGCCGCTTCGACGCCACCATTTCTGCGTCGGTCGCTGCGTAGCTTGTGCAGGTCCTCCTCCCGCGCATCGGGCTTGCACCTCAGCGACGACGAGCTGCTCCAAGCACCCCGCCGTGCTAAACGGAGTCGTTCGGTGGCACCTGCAACAGCCGGCTACCAACGTCCTGCGCGGAGCAAGTCGGTGGCTCCTGGAAGCAGGAGCAGGTCGGTGGCTCCCAGGAGCAGGAGTCGGCCTGCGGATTCCAGGAGCAGCTCTTCCAGCAGTGAGGGGTCCAGGAGCTGGAGCCCGGTCCGACGCTCGCAGCGTAGTGCGTcggtggcggcacgacggcgtcacgtgacgcccccCCGGCGGCGATCGGAGCGGAGCAAGTCTGTGGGGCCCGCGTCGTACTACAACAGCGACGATGGTTCGAGCTGCAGCTCCGCGGACAGCTCGCCtgcctggaaggggagggggaagggtcgGCAGCGGAGGAAGGTGAGGAGCAGCCGCTCCGTGGCTCCGGCTCGGAGCAGGGCGGCCCCCCACAGGAGCCCCCTCAGCCCGGCGGGCAGTCACTACCCACTCGCGGACCGCCAGCGGAGGTCGAGGAGCAGGAGGCGGGCTGCGTCCCGATGCCTGAGTGTGCCGCCGACGTCCCGCCGGAGTGAGTCCGCGACACCCAGCAGCCCGGAGGATGatccggctggagctggagtaggCGCGCCCTGCCTGGACATGCCCCAGGGGCGGCCCTCCGTCATCGTGAGCCACGGCAGcgccggcgggcaggccgctgAGGAGGTCGCCGAGAAGGTCGTCGAGGAGGTCCCCGAGGAGGTGGGGGCCCGTGCTGAGGGAGCTCCCCGCTGGGGCAGCGGCAGGATGAGgcaccgcagccgcagccgctcgGGCCTCGCCGCGGAGTACCTGGACGCGCTGATCggcagggcgggcgaggagggggcgcgACTCTGCGCGGCCTGCCGCGGACACGGCCTCGGCGTGGTGCTGCGCGGGCACAAGGGCAACTGCCCCTTCGAGCGGTGCGCCTGTGTCGTGTGCGCGGAGCGGAAGGGGAGGATGACGGGAACCTCGCccaccgcggccgccccgcctccgccccaccTGCAGCGCACCGCCTCACTGCGCTCTCCGCACTGCTGCAAGAAGTGCCGCCTGCATGGGCTGACTGTGGTAGTGCGCGGTCACAAGGGGAAGTGCCCCTTCACGAAGTGCAGCTGCGACAAGTGCACGCTGACCACCCCCTTGAGAGCCCGGCGCTCCTCACGGACGACCTCCTCGGCGCTGCCTAGCCCAGCACTGTGTTATAACCCTACAGCTGCGAGGGGTCCTGACGAGgctgcgcgctgcagagtggagTCTCCGGACTCCACAACCTATGACTGCCTGTGGTGCGGCCGGTCCTTCACGGGAAGGTCGGAGGCGGACGCGCACGCCTTGACGCACGCGGAGCCCGACGACCAGGACGAGCAAGCCGCCGTCCGGGAGAGGCGACCGGAACCGGAAGTCACGGGCAGTCCTCCCGCACCCAGCCAGTCCGCTGTAGGCTCTGATGGGCCGTGTCTGCTGCTGTCGGCGCCCTGGTCGCTGGAGCCCCACCAcgaggccgtgctgctgcccgtGGCCGCCGCGGTGCCCGGCGAGCCGCTGTCGTGCGGCAGCGAGTGCGCGCTCACCTTCCCGAcgaggctggcgctggccaaGCACCGCCTGCAGGCGCACATCGTCCCCGCCAAGCACAAGTGCCCCAGCTGCGCGGACACCTTCCCGTCGAGGTCTCGGCAGCGACTGCACGTGGCCACGGCGCACGCCGCGCTGGGTCTCGCCTGCTCGCTGTGCCCGGACCGCTTCCCATcgcggctgctgctcggcgcgcacctCCTGGTGGACCACCGCGCGAAGCTCCCcgccgagctgcagctgcagtgccccGAGTGCGGGGAGCTGTGCTCGGCGGCCAGCCACCTCACCTCGCACATCCGCGCCTTCCACCCGGGACGCAGGCCGCTGCACTGCGCCATCTGCACGCGCACCATGGAGCACGTCAGCTTCGACTCGGtgggctcgctgctgctgcaccacaGTGGGCACCTCGCCGCCATCCGCCGCCAGCACTGCGACGTGTGCGCGGCCTGGTTCCCGTCCCAGGAGCTGGTGCAGGCGCACGAGCGCACGGAGCACGGCGGCGAGCTGCCCTTCGCCTGCCCCCTCTGCGACCGCAGCTTCCGAGCCGCCGCCGACCTGGGCGCGCACCTGGCCGACGCGCACCCGGGCTGCACGCCGTTCGCCTGCCGCTGCGGCGGCCTGTTCGCCGACCCGGAGGAATTCCACGCCCACGCCGTGCACAGCCTGCACCTCGCCGGGGCCtcggccggggccggccagcAGGAGCTGTACTCTTGCGCGGTGTGCGGCGTGGAGTCGCAGGACGCCCTCTGGGTCAGCGAGCACGAGGAGCAGCGACACATGGACCTGGTGCCGCTCGAGCGGGTCGCCCAGCTGATGGCACTCCTCCAGGACACCAAGGTGTACTCTGCCTGA
- Protein Sequence
- MTPAAYPTPPAGSPQNRPRGRQRRATTRFDNSPAASTPPFLRRSLRSLCRSSSRASGLHLSDDELLQAPRRAKRSRSVAPATAGYQRPARSKSVAPGSRSRSVAPRSRSRPADSRSSSSSSEGSRSWSPVRRSQRSASVAARRRHVTPPRRRSERSKSVGPASYYNSDDGSSCSSADSSPAWKGRGKGRQRRKVRSSRSVAPARSRAAPHRSPLSPAGSHYPLADRQRRSRSRRRAASRCLSVPPTSRRSESATPSSPEDDPAGAGVGAPCLDMPQGRPSVIVSHGSAGGQAAEEVAEKVVEEVPEEVGARAEGAPRWGSGRMRHRSRSRSGLAAEYLDALIGRAGEEGARLCAACRGHGLGVVLRGHKGNCPFERCACVVCAERKGRMTGTSPTAAAPPPPHLQRTASLRSPHCCKKCRLHGLTVVVRGHKGKCPFTKCSCDKCTLTTPLRARRSSRTTSSALPSPALCYNPTAARGPDEAARCRVESPDSTTYDCLWCGRSFTGRSEADAHALTHAEPDDQDEQAAVRERRPEPEVTGSPPAPSQSAVGSDGPCLLLSAPWSLEPHHEAVLLPVAAAVPGEPLSCGSECALTFPTRLALAKHRLQAHIVPAKHKCPSCADTFPSRSRQRLHVATAHAALGLACSLCPDRFPSRLLLGAHLLVDHRAKLPAELQLQCPECGELCSAASHLTSHIRAFHPGRRPLHCAICTRTMEHVSFDSVGSLLLHHSGHLAAIRRQHCDVCAAWFPSQELVQAHERTEHGGELPFACPLCDRSFRAAADLGAHLADAHPGCTPFACRCGGLFADPEEFHAHAVHSLHLAGASAGAGQQELYSCAVCGVESQDALWVSEHEEQRHMDLVPLERVAQLMALLQDTKVYSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -