Aruf009802.1
Basic Information
- Insect
- Aptinothrips rufus
- Gene Symbol
- lilli
- Assembly
- GCA_902196195.1
- Location
- CABIKL010002060.1:5116-12257[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6e-09 9e-05 22.8 12.5 410 513 120 243 108 244 0.75 2 4 0.048 1.7e+03 -1.1 2.0 203 265 502 565 452 580 0.45 3 4 0.1 3.5e+03 -2.2 22.7 76 229 546 706 531 744 0.40 4 4 0.53 1.8e+04 -4.6 7.4 193 240 861 907 803 947 0.55
Sequence Information
- Coding Sequence
- ctgggggagtgggggtgtcgGTCCCACCTGGCGCTGACAGGTGCGTGCCtgcagccggccccgcccccgcacgtgCGCCTGAGCGGTCAGGACGCCAGCCTGCCAGTCCGCCTGtccgcctgcccgccctccctccacgCGATAGGGTGGGGTTGCTCCCCGACGacgccaacccccacccccacccccacccccgccaccctcccccacgcgacgccgcgcgacGTACAGTACCGTCACTACCCCGCGCCGCAAGGTCACAGTGCACCTGCACAGCAGAAGACGACAccctgcctgccgtgccctgccgtgccctgccgtgccgtgccgtgccAGCGCAGCTTCGTCGCTCCCTCCCGAGTCGAATCGAACCTGGAGAATGACCTGATCTTGTCCGAGGACAGCGACGATGAGGGCGgcaagcagggcgcggcgccagtggccagccccgcggccagccccgtgGACCTGCCGGCCACCGTCGACATCCTGCCCCCGATGAGCGTCGGGCCCCCTCCACCCGTGCTGGACCCCATGTCGCCCGTGAACAGCCCGAGCCAGGTGAACAGCTCCTCCTCGGACGGGTCGGGCTCGGACTCGGGCTCGGACAGCGACTCGTCGAGCGAAGAGTCCAACGAGGAGCCCGAGGTCCCCGAGGAGCCTCCCCCGGCGGTGCTGCCTCCTCCCGGTGCCTCCCCCGAACCGCGCTGGAACCTGGAGTCCTTCCTGTCCCCGGGTCGCAGCGAGGCAGCGAACGATGGCTCTAAGGTGagcggcaaggcacggcaggaCGGCAACCtggtcctggagctggagtgggagCCTGCtAAGGACGGAGTCATGGCGGCACCTCTGGGACCTCTGGGCAGCCCCAGCACCGGGGACATGAAGAGGCCGTTGAGCCCGCTGGCTCCCCCGGCCACGGGGCGGTCGGGCAGCCGGTCCGCCAGCCGCTCGGCTGTCAGGGCCTCGGGTCGCGCGGCCCGTCGCGCTGGTCTACCGGGCGAGGACGGCGTGGAGCACAGCGACatcttgcagcagcagcacgacgtGGTGCACGATGTGGTCCAGGAGGTCCTGGCCAacccgcaccccgcgctgctctcGCGCTTGTCCGACTCGGACGACTGCGCCAAGAAgcagcccgcccctccccccgcccccgccgcactcTTACCCAAGCCCCGGCAGCGGAGAGGCCGGCTCCAGGAGAAGACCCCAGCACTGGTTCCTGAGTCTGACAGAGTGCCTCAGAAGAGGAACACAGAAAGGGTGGTGTCCGGAGAAGTCTTTGAGAATGAcagcccgcctccagctccCAAACCAAAAATTGAAGTAAGCCCACCTAAACTTGATGTGGAGGGCAATGTTGTTCAAGACAAGAAGAAGAATGACACGTTACGTAAGCTCTTTTCAATAAAGCGTGAACCCCAAGAAGCAGGGGGCAAAGGTGGTAAGGGTGGTAAAGGAGAACGGTTAGAACCATCTTCCCCTCCAACCCCACCTCCTCCTGAAGATGTTCCCAAGCCTGAACCTCAGCTAACTGAcagtgagaagaagaagaaaagaaaacgtcaTGGAAAACACAGTGAAAGTGTTTCACCTGAAAAGGTTCCTCAGCCATTGAAGGAAGAGCCTCCAGAAGAAGAATTAGTGGCATCCATCAAGAGGGAAGGACCTTCCACAAGCCACCAAACTACATCAAATCACCCTAGACCTTTGCAAATAATTTGTCGTTTGGACCTCAGTCGGTTACCATTCATCCCACCTCCACCAAAGACCCGTCGTCCAAGAGATGTACGCGCACAGACTGAGTATTCTGATACAAGAACTGCTGATGAAGATGCGAGTATTAGTCACAGAAGTAAAcgtggaaataagaaaaggagGAGACATCATAGTCATGTAGAAGATGGCGACTCTCAAGAAGGTGACCAGTCTGTACGAGAAGATGCTGTCAACAGTGAAATTGGAGCTGATCGAACATCACAGCTGAGTCACAAAAGAGAGCGTCGTTTATCTACAAGCTCTATATCTTCTATATCTACTACCGCAAGTCGAAAACATTCTAAGCACAAGGATCGCCAGCATCATGAAAGACACCATAAGCGGCAGAAATTTGGGGAAGACCATGCAGTCCGGCCAGCTTATCAGGGTGGAGATAGTCTTGTAGATCAACCTCCTACCAATCATGAACGGGAAGAGCCTGTAGCAGGTCCAAGCAGTCGTAGGCAACTAGGTTTGGATGTGGATCTCCCATCATCAGTCCAACGTCTTTATTACTCATATTTTGAAGAGAAACTTAGAGACAGTATTCAAGAACAAGCCCATAGGTTTGTTACCCAGAGGTTCAAGCATCAAAACCGAAATGTAGATTTACAAATGATACAGAATTGCCTCTGTGTGTTAAGTATGCGATCTCAGTCTCTATTGTACTTGAAACTTTATGAAATCAATCAGAGTGAGTTAGCGGAGTTTGAAAAGCCTGTCGCCAATTATCTGAATTCTGTCAAGACACCAACTGTCCCTGTGGTCCAAGCCCCTGCAGAAGGTCAGGCTCAGGGCCAAGGAACCCCATCATCATTATCCCCGACACCATCACCATCAGGGTCTGTTGGGTCAGTTGGTTCCAACTCGTCCCAGTCTTCTCTTTCATCTGGATACAGCAGTGGCAATGCCAATGGCAACACCAATGGCAATGCCAGTAGTAACCCCAGTGGGAGTAGTAATGGCAATGGAAGTGGACAGACCACCACTGGAAGTGGCCCTGGACCAACAAGTGCTGCAAACCCACCTTGTGTTTCAGTGCCCATCTCTATTTACTCAATGCTTTCCAAGCAGCATAAATGTTGGACCAATCTGAAAATGTCCCATGATATGTGGGACAAGGCTGATGATCTAGTGTTCAGAGGAAACCATACAGACTTTTTCATTGCCCTGGATCATACATGTGGACCCCTTACTCTTCACAGCTCACTGTCAGCTCTAGTGCGTTATGTTCGTGAAGGACTCGTACGATTAAGAAATATTAATCCCGACATAATGCCTCACTAG
- Protein Sequence
- LGEWGCRSHLALTGACLQPAPPPHVRLSGQDASLPVRLSACPPSLHAIGWGCSPTTPTPTPTPTPATLPHATPRDVQYRHYPAPQGHSAPAQQKTTPCLPCPAVPCRAVPCQRSFVAPSRVESNLENDLILSEDSDDEGGKQGAAPVASPAASPVDLPATVDILPPMSVGPPPPVLDPMSPVNSPSQVNSSSSDGSGSDSGSDSDSSSEESNEEPEVPEEPPPAVLPPPGASPEPRWNLESFLSPGRSEAANDGSKVSGKARQDGNLVLELEWEPAKDGVMAAPLGPLGSPSTGDMKRPLSPLAPPATGRSGSRSASRSAVRASGRAARRAGLPGEDGVEHSDILQQQHDVVHDVVQEVLANPHPALLSRLSDSDDCAKKQPAPPPAPAALLPKPRQRRGRLQEKTPALVPESDRVPQKRNTERVVSGEVFENDSPPPAPKPKIEVSPPKLDVEGNVVQDKKKNDTLRKLFSIKREPQEAGGKGGKGGKGERLEPSSPPTPPPPEDVPKPEPQLTDSEKKKKRKRHGKHSESVSPEKVPQPLKEEPPEEELVASIKREGPSTSHQTTSNHPRPLQIICRLDLSRLPFIPPPPKTRRPRDVRAQTEYSDTRTADEDASISHRSKRGNKKRRRHHSHVEDGDSQEGDQSVREDAVNSEIGADRTSQLSHKRERRLSTSSISSISTTASRKHSKHKDRQHHERHHKRQKFGEDHAVRPAYQGGDSLVDQPPTNHEREEPVAGPSSRRQLGLDVDLPSSVQRLYYSYFEEKLRDSIQEQAHRFVTQRFKHQNRNVDLQMIQNCLCVLSMRSQSLLYLKLYEINQSELAEFEKPVANYLNSVKTPTVPVVQAPAEGQAQGQGTPSSLSPTPSPSGSVGSVGSNSSQSSLSSGYSSGNANGNTNGNASSNPSGSSNGNGSGQTTTGSGPGPTSAANPPCVSVPISIYSMLSKQHKCWTNLKMSHDMWDKADDLVFRGNHTDFFIALDHTCGPLTLHSSLSALVRYVREGLVRLRNINPDIMPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -