Basic Information

Insect: Apotomis turbidana
Gene Symbol: -
Assembly: GCA_905147355.1
Location: LR990280.1:33105993-33125252[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0015 0.16 14.1 0.8 1 23 199 221 199 221 0.98

2 27 0.0023 0.26 13.5 1.6 3 21 257 275 257 276 0.94

3 27 3.8e-05 0.0043 19.1 0.3 3 23 313 334 311 334 0.96

4 27 5.2e-05 0.0058 18.6 0.6 1 23 385 408 385 408 0.96

5 27 0.23 26 7.2 0.5 1 23 430 452 430 452 0.96

6 27 0.00012 0.013 17.5 3.7 2 23 489 510 488 510 0.97

7 27 0.00085 0.096 14.8 3.9 2 23 560 582 560 582 0.97

8 27 0.0038 0.43 12.8 0.7 1 23 632 655 632 655 0.95

9 27 0.0021 0.24 13.6 0.2 1 23 711 733 711 733 0.97

10 27 0.023 2.6 10.3 6.1 2 23 745 766 744 766 0.96

11 27 0.048 5.4 9.3 1.7 2 23 778 799 777 799 0.96

12 27 0.0052 0.59 12.3 1.0 1 23 809 831 809 831 0.98

13 27 0.004 0.45 12.7 7.7 1 23 859 881 859 881 0.97

14 27 0.011 1.2 11.3 4.3 1 23 892 914 892 914 0.98

15 27 2.6e-05 0.003 19.6 0.8 1 23 922 944 922 944 0.97

16 27 0.0009 0.1 14.7 0.1 2 23 964 986 963 986 0.97

17 27 0.046 5.2 9.4 0.6 1 23 1004 1026 1004 1026 0.92

18 27 0.33 37 6.7 3.7 1 23 1033 1055 1033 1055 0.96

19 27 0.12 13 8.1 2.4 2 23 1066 1088 1065 1088 0.95

20 27 0.005 0.56 12.4 0.3 1 23 1110 1132 1110 1132 0.97

21 27 0.015 1.7 10.9 0.1 2 23 1213 1234 1212 1234 0.94

22 27 2.1 2.4e+02 4.1 4.5 5 23 1244 1262 1241 1262 0.94

23 27 0.81 91 5.4 0.8 2 23 1273 1295 1272 1295 0.95

24 27 0.26 30 7.0 2.2 2 23 1312 1330 1312 1330 0.89

25 27 0.17 19 7.6 1.8 2 21 1334 1353 1334 1354 0.94

26 27 1.7 2e+02 4.4 2.7 2 23 1402 1423 1401 1423 0.93

27 27 0.0024 0.27 13.4 0.4 2 23 1434 1456 1433 1456 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0015	0.16	14.1	0.8	1	23	199	221	199	221	0.98
2	27	0.0023	0.26	13.5	1.6	3	21	257	275	257	276	0.94
3	27	3.8e-05	0.0043	19.1	0.3	3	23	313	334	311	334	0.96
4	27	5.2e-05	0.0058	18.6	0.6	1	23	385	408	385	408	0.96
5	27	0.23	26	7.2	0.5	1	23	430	452	430	452	0.96
6	27	0.00012	0.013	17.5	3.7	2	23	489	510	488	510	0.97
7	27	0.00085	0.096	14.8	3.9	2	23	560	582	560	582	0.97
8	27	0.0038	0.43	12.8	0.7	1	23	632	655	632	655	0.95
9	27	0.0021	0.24	13.6	0.2	1	23	711	733	711	733	0.97
10	27	0.023	2.6	10.3	6.1	2	23	745	766	744	766	0.96
11	27	0.048	5.4	9.3	1.7	2	23	778	799	777	799	0.96
12	27	0.0052	0.59	12.3	1.0	1	23	809	831	809	831	0.98
13	27	0.004	0.45	12.7	7.7	1	23	859	881	859	881	0.97
14	27	0.011	1.2	11.3	4.3	1	23	892	914	892	914	0.98
15	27	2.6e-05	0.003	19.6	0.8	1	23	922	944	922	944	0.97
16	27	0.0009	0.1	14.7	0.1	2	23	964	986	963	986	0.97
17	27	0.046	5.2	9.4	0.6	1	23	1004	1026	1004	1026	0.92
18	27	0.33	37	6.7	3.7	1	23	1033	1055	1033	1055	0.96
19	27	0.12	13	8.1	2.4	2	23	1066	1088	1065	1088	0.95
20	27	0.005	0.56	12.4	0.3	1	23	1110	1132	1110	1132	0.97
21	27	0.015	1.7	10.9	0.1	2	23	1213	1234	1212	1234	0.94
22	27	2.1	2.4e+02	4.1	4.5	5	23	1244	1262	1241	1262	0.94
23	27	0.81	91	5.4	0.8	2	23	1273	1295	1272	1295	0.95
24	27	0.26	30	7.0	2.2	2	23	1312	1330	1312	1330	0.89
25	27	0.17	19	7.6	1.8	2	21	1334	1353	1334	1354	0.94
26	27	1.7	2e+02	4.4	2.7	2	23	1402	1423	1401	1423	0.93
27	27	0.0024	0.27	13.4	0.4	2	23	1434	1456	1433	1456	0.95

Sequence Information

Coding Sequence: ATGGCTCTCAAGCTGGGAAAATGTAGACTTTGTCTCAAACTTGGTGACTTCTATTCCATCTTCACTGTGGACAACAGTGTACAGTTGGCGGACATGGTGATGGAGTGCGCCCGTATCAAAATATTTGAAGGAGATGGTCTGCCAGATAAAGTTTGCGCAGAATGCATTCAGAAACTCAGCAGTGCATACATTTTTAAACAGCAATGTGAGCGAGCAGATCAGGAGTTACGTCGCAATTTTATACCACCACCAGGAACCAGCTCCACTCCGGTCACAACGAACAGGAAAAGTAGTGATTCCGTATCATCGACTCATACCGAGGCTACCAATCAAATCAAACCATATCAAGCACCTGAATCGGATTCTGCCAAAAGAAACAGCCGCAAACGTAGCCACGAAAGTTTGGAAATTGCTTCTGACAGCAGCAAATCAATCGAAACTCGACCCACCAAACGGGTCGAAGAACTTAAAAATAGTCAGAAAAAACCTAGACTCAAATCAAGTAATTATTATGCGGATTCAGATTACGATGACAATAGCGCTTCTCAATTCTCAGGCGAAACAGATTCCGACGAGCCCCTTTTGAGAGAGGAATTTAAGTGTAAAGTTTGTGGGAAGCAGTTCCAATCGATTAAAAGTGTAAACGCTCACTCCAGGATTCATTCTAACAAGACATACAAGGCAAAAGAAACACTTACTGAAAATGTAGTGGTAAATATCCCAAAGAACAATATACATGATGCAACAGACGTAGACGATCTACTCGGCTGCGAGAAATGTGGCAAGTCattcaaactaaaaataatgcTGAAACGCCACCACGAGACCTGCAGCGAGCAGCAGCCTGCACTGCAGAAGACCCCACCGAAGCCGATACAGAAGGAGTTGCTCATAGCATTGGAGCCTATTGACGGTATCACTTCTAAAAGAATCAACTGTGGCATGTGCACTACTACATTTAAAACCGTCGAGAACTTGGAAAAACATATGAGAGTAGTTCATGCAGCCGTACTTCCGAAAGTTAAATCTGAGCCGAAACCAAATAATGGGAAAGTTTCCGTGCCGTGTATTTTCTGTAGAAAACCGTTTGACGATTATTACGTTCACAGCGAGCATTTCAGCAAGTGTCCCGAAAGCACTAGCACTTCCACGTACGAATGCCCGGTATGCAAAAAGGTGACAACTCGAAAGGCATCGTATTTCCGGCACATCAAGGACGTGCACTTCGAGCCGCGCATGTGGGCGATGAAGCCAGAGACGCAGGAGGAGTCCAGCTCGCAGGAGCTGTTCGAGTGCCGCATGTGCTACAAGCAGCTGGCCACGGAGCACCTGCTCATAACGCATCTGGCGGCCCACGTGTCCAACATCGAGGACGCCGAGGAGGCGGCCGGGGACGAGTCGAGGCCGAGCACCATCGAGGATTCTTCATCAATATTGTCCGAGAGTAGTGCCAGCGGTCCTCTAAAATGTAATTACTGCGACAAAAGGTTCAAATACAAGAAATCATTAAGCACCCATGAGATGAAACATTTCCAACTTGAGAAATCGGAGAGTCATCAAAACCAAGACGATTCGGTAACCGAAGGAATGGAAGCCAATACGAACGCGTCAACAAGTCTGTTGAACGAGTCGTACCGCGAGGAGTCGGAGTCGAGCGCGGACGAGGGCGACGACAACACATGCGACATCTGCGAGAAGCAGTTCTCGTACAAGCGCCTGCTCATACACCACAAGCGCACCAAGCACAACATGAGCTCCGGCACCAAGCGGGCCACGATCGTGCTCAAAGACTGTCTCGTGCGCTGCCTCATATGCGACATCGAGATGAACGTGAGCGCCGTCAACGATCACAACAAGAAACACATTCAGCTGAACATGAAACCGCGTAATCTCTACACTTGCATCGATTGTGGTGAGAAATTTAAGAGTTGTAACGCTCTAGCGACTCACATCAAGCTAGTGCACAGGCTAAAACAACTACCGGCTAAGCAGTTCGAGGGCGCTGACTTGGCGGATTTTTGTGAGGTCGTTGTGACAAAAGCGGAACCGCTGGACGAGATCCAGAGTCACAACGGCTTTGGTGAGGTTCCGGAAGAGCAAGAGGGGTCGCCTTTAGTCAACATGAGCGGATTTAATTGCACCATTTGCGGAAAGAACATGCCTACTCTGATTTCACTAAAAAGGCACATCAATTGGCATTCAAATGTAGgaaataatttagaaaaaaagttGGAGTGTTTTGTGTGTAAAgagaCATTCCGGTTTCAATGTCACTACAAACTACATATGCGCGAGCACTATCGTGATACAAATCTTGACCCGAAGCTGCTGACTTGCACTATTTGTAATCGGAGAAGCAAGCACTTGCGGGCGGCTCAGGCTCATATGAATTATCACAAACAGACCCGCTTTAAGAATAAGGACTATCAGTGCTCCATATGCAAGCGCGTTTTCCAGTACCGGAAGGTATATCTCTCTCACATGGCTATACACTACAAACGCGGCGAAAGTCAGAATACAATTGTAGGTGACCTGCTACCTACGACTGCTGACAAAACAGTTTTTGACGGAACGCATACTTGTACTCACTGTGGAAAGGTCTGCGACTCGGAAAATTCTCTAAAACATCATATGTCTTGGCACAAATCGAAGACTTTGTTGTTTGGCGCACGGCACGAGTGCCCAATTTGCCACATCATGTTCACCAATAAAAAAAGGCAGGAGTTACATACGAGAACTCATTACGAAGACGAGAACGGTCCATTCAAGTGTACGATATGCGGCAAAGGCTATACGGACGAAGAATACTTCCGAAGACACGTGAAAGGGCACAACTTCGACCATCAATCTCACAAAGACAGAATAGCGAAGCTTAGGAAGGACAAAGTGAAGTGTCCCATCTGCGTGCGCTACTACCCCGACTGGGTGAAGCTGATCCGACATCTGCGGCGCACGCACCCCGAGAGCAAGATGGTGAAGCACGACCCCGACGCGCCCGCGCCGCGGCTGTTCGCGTGCAAGCTGTGCGCCAAGTCCTTCCGCGACGAGCGGCGTCTGCGCTACCACGAGGAGGCCCATCTGCGCAAGCCCGAGTTCTTCAAGTGCAAGTTCTGCGGTAAGAAAACTATATCACTCAAAAATCATAATTTGCACATTAAAGGGCATCTCACTTCCAAACATATAGACAATCCCCTTAAATGTACACAATGTGAGGAGCAATTCATCAAGGGATATGATTTGCATCACCACTTGCGAGATGTGCATAACATTAACGAAACTTGGATTGCCGATCGCAATGAGCAAACGCTTAATGGTCCATTAAAAGAGTTTCAATGCTCGATTTGCCTCAAAATACTTGCGAGCAAAGGAAACTACGAGAGGCACTTGGATTACCATAATTCGCTAAGGTGCAACTACTGCTACGATTATTTCAGTTCACTGAGGTTCCTAGAAGGCCATCTAACATATAGCTGTGACAAAAAGAAATTGGTTGGCGATACTGAAATATATCCGAGGAAGATAAAATGTCACATATGTTACAAACCATTCCATTTACAAGTTAAACTGGATTGCCATTTACGCACACAACATAATATAAAAGTGTCTAAGGAAGTTGCGAAAAGCAAAAAAGACCTGGTATGTGATTATTGTTTTAGAGTTTTTGAAAACCTCGATGCGTTAACGGGACATAAAATATATCATCGCACAATTGGTTATTATGGATGTATATATTGCAAGAGGAAGTTTAACACATTGACCTTGTACAGGAAACATAAGAACCATCACTTTTCGCAGCTGAATGTCGACAACCCGACTAAGTGCGAACACTGCGATGATACTTTTGTCGCTTTCCGTGAAATGATATACCACATGAGAGACGTACACGGAGACAACAAGGAGTGGCTCGTGATGCCCAAGGAGTCCATCGAGGAAACCTGCCCCATCTGCAACAAGGTGTTCTTCAACTTGCACCGGCATTTAGACTATCATGAAGAAAATAGGTGCAAGAAATGTGGAGAATACTTTTACTCTCGGACGGACTTCGATAACCATCTCTGCGCCATCGAAAGCGACGATGAAGTAGGCAGCGTTCACGAGGACTTGCGACCCGCTTACGAAGAGTGCCGATTCTGCTTCAAGCCCATAACGAGGAAGAGTTCTAAGGCCAAGCATGACCATATACATAAGGGTTCCGGGTCTATATCTTGCAGATTCTGTACGCATAAATTTAAGACTATGGACGCATTCAACATCCATGCATTCTCACATCGCAACCGCAAATACAGGAAAAACCCATTGAAGTGTCGTAAATGCGGAGAGAAATTTATTCAGTACGGACCTTTCATAAAGCACATGAAGGAGGTGCATAAGTTCTTCCAAAAAATGCACTATCGCGCAACCGTAAAGGCCGAGCCGTGCGTCGTATGCAAAGAGGAGTTCCCCAACCTGCACAATCACTACCGGGCGCATCTGCAGAACCAGTGCCCCTCGTGCCTCAAATACTTCACCTCTGTCAAAGTGTTCTCGCAGCACGAGTGCGGCAAGGAGGATTCTGACCCGTCCAAGGTGTTCACAAGCGACGAAAACTTACAATTGTTGATTAACACGTATGTTCCCAAAGATGAACAGGACGAACAAAAGTATTACGCTTACGGCAGCGAGGAAGAGGAAGATAGCGGTCCGCGTCTACAGGGCCACATTATGCAAGACGAGGAAAGTCAAAACTCGAATGAAAACGAGCACTTCCATCTGCAGTGCCCCATCATATCGGACGTCCTGTCGCTGTACCAGAAGCCGGGTGTCGTCCAGGACGAGCCCGCGGACGACCCCGACGTCATCAACCTGTCGGACGACGACGATGTGGGTGTCGTTGAAAATAATCCCATGTTTCCCACAATTACGATTGATGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSVQLADMVMECARIKIFEGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRRNFIPPPGTSSTPVTTNRKSSDSVSSTHTEATNQIKPYQAPESDSAKRNSRKRSHESLEIASDSSKSIETRPTKRVEELKNSQKKPRLKSSNYYADSDYDDNSASQFSGETDSDEPLLREEFKCKVCGKQFQSIKSVNAHSRIHSNKTYKAKETLTENVVVNIPKNNIHDATDVDDLLGCEKCGKSFKLKIMLKRHHETCSEQQPALQKTPPKPIQKELLIALEPIDGITSKRINCGMCTTTFKTVENLEKHMRVVHAAVLPKVKSEPKPNNGKVSVPCIFCRKPFDDYYVHSEHFSKCPESTSTSTYECPVCKKVTTRKASYFRHIKDVHFEPRMWAMKPETQEESSSQELFECRMCYKQLATEHLLITHLAAHVSNIEDAEEAAGDESRPSTIEDSSSILSESSASGPLKCNYCDKRFKYKKSLSTHEMKHFQLEKSESHQNQDDSVTEGMEANTNASTSLLNESYREESESSADEGDDNTCDICEKQFSYKRLLIHHKRTKHNMSSGTKRATIVLKDCLVRCLICDIEMNVSAVNDHNKKHIQLNMKPRNLYTCIDCGEKFKSCNALATHIKLVHRLKQLPAKQFEGADLADFCEVVVTKAEPLDEIQSHNGFGEVPEEQEGSPLVNMSGFNCTICGKNMPTLISLKRHINWHSNVGNNLEKKLECFVCKETFRFQCHYKLHMREHYRDTNLDPKLLTCTICNRRSKHLRAAQAHMNYHKQTRFKNKDYQCSICKRVFQYRKVYLSHMAIHYKRGESQNTIVGDLLPTTADKTVFDGTHTCTHCGKVCDSENSLKHHMSWHKSKTLLFGARHECPICHIMFTNKKRQELHTRTHYEDENGPFKCTICGKGYTDEEYFRRHVKGHNFDHQSHKDRIAKLRKDKVKCPICVRYYPDWVKLIRHLRRTHPESKMVKHDPDAPAPRLFACKLCAKSFRDERRLRYHEEAHLRKPEFFKCKFCGKKTISLKNHNLHIKGHLTSKHIDNPLKCTQCEEQFIKGYDLHHHLRDVHNINETWIADRNEQTLNGPLKEFQCSICLKILASKGNYERHLDYHNSLRCNYCYDYFSSLRFLEGHLTYSCDKKKLVGDTEIYPRKIKCHICYKPFHLQVKLDCHLRTQHNIKVSKEVAKSKKDLVCDYCFRVFENLDALTGHKIYHRTIGYYGCIYCKRKFNTLTLYRKHKNHHFSQLNVDNPTKCEHCDDTFVAFREMIYHMRDVHGDNKEWLVMPKESIEETCPICNKVFFNLHRHLDYHEENRCKKCGEYFYSRTDFDNHLCAIESDDEVGSVHEDLRPAYEECRFCFKPITRKSSKAKHDHIHKGSGSISCRFCTHKFKTMDAFNIHAFSHRNRKYRKNPLKCRKCGEKFIQYGPFIKHMKEVHKFFQKMHYRATVKAEPCVVCKEEFPNLHNHYRAHLQNQCPSCLKYFTSVKVFSQHECGKEDSDPSKVFTSDENLQLLINTYVPKDEQDEQKYYAYGSEEEEDSGPRLQGHIMQDEESQNSNENEHFHLQCPIISDVLSLYQKPGVVQDEPADDPDVINLSDDDDVGVVENNPMFPTITIDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00412737;
90% Identity: -
80% Identity: -