Basic Information

Insect: Apotomis turbidana
Gene Symbol: -
Assembly: GCA_905147355.1
Location: LR990298.1:21079279-21090408[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.14 16 7.8 0.0 1 23 172 194 172 194 0.97

2 21 0.12 14 8.0 0.7 1 23 238 260 238 260 0.94

3 21 1.9 2.1e+02 4.3 0.1 6 23 272 290 272 290 0.92

4 21 0.91 1e+02 5.3 0.1 3 23 300 321 299 321 0.92

5 21 3.4e-07 3.9e-05 25.5 0.2 3 23 350 370 348 370 0.97

6 21 0.022 2.5 10.4 0.5 3 23 379 400 377 400 0.96

7 21 0.99 1.1e+02 5.2 0.0 1 23 406 428 406 428 0.90

8 21 0.091 10 8.4 0.4 2 23 435 458 434 458 0.91

9 21 0.15 17 7.8 0.3 6 17 468 479 464 480 0.89

10 21 0.069 7.8 8.8 1.2 1 23 608 630 608 630 0.94

11 21 0.00069 0.078 15.1 2.0 2 23 637 659 636 659 0.92

12 21 3.2e-05 0.0036 19.3 5.5 3 23 667 687 665 687 0.97

13 21 2.2e-05 0.0025 19.8 1.5 1 23 693 715 693 715 0.98

14 21 0.0013 0.14 14.3 1.2 1 23 721 743 721 743 0.97

15 21 0.0067 0.75 12.0 0.0 1 23 749 771 749 771 0.90

16 21 0.01 1.1 11.4 5.4 1 23 777 800 777 800 0.95

17 21 0.00011 0.012 17.6 0.0 3 23 846 867 845 867 0.94

18 21 0.047 5.4 9.3 4.1 3 23 875 895 873 895 0.91

19 21 0.00091 0.1 14.7 0.0 1 23 901 923 901 923 0.98

20 21 2.8e-05 0.0032 19.5 1.2 1 23 928 950 928 950 0.96

21 21 0.018 2 10.7 0.2 6 23 960 977 960 977 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.14	16	7.8	0.0	1	23	172	194	172	194	0.97
2	21	0.12	14	8.0	0.7	1	23	238	260	238	260	0.94
3	21	1.9	2.1e+02	4.3	0.1	6	23	272	290	272	290	0.92
4	21	0.91	1e+02	5.3	0.1	3	23	300	321	299	321	0.92
5	21	3.4e-07	3.9e-05	25.5	0.2	3	23	350	370	348	370	0.97
6	21	0.022	2.5	10.4	0.5	3	23	379	400	377	400	0.96
7	21	0.99	1.1e+02	5.2	0.0	1	23	406	428	406	428	0.90
8	21	0.091	10	8.4	0.4	2	23	435	458	434	458	0.91
9	21	0.15	17	7.8	0.3	6	17	468	479	464	480	0.89
10	21	0.069	7.8	8.8	1.2	1	23	608	630	608	630	0.94
11	21	0.00069	0.078	15.1	2.0	2	23	637	659	636	659	0.92
12	21	3.2e-05	0.0036	19.3	5.5	3	23	667	687	665	687	0.97
13	21	2.2e-05	0.0025	19.8	1.5	1	23	693	715	693	715	0.98
14	21	0.0013	0.14	14.3	1.2	1	23	721	743	721	743	0.97
15	21	0.0067	0.75	12.0	0.0	1	23	749	771	749	771	0.90
16	21	0.01	1.1	11.4	5.4	1	23	777	800	777	800	0.95
17	21	0.00011	0.012	17.6	0.0	3	23	846	867	845	867	0.94
18	21	0.047	5.4	9.3	4.1	3	23	875	895	873	895	0.91
19	21	0.00091	0.1	14.7	0.0	1	23	901	923	901	923	0.98
20	21	2.8e-05	0.0032	19.5	1.2	1	23	928	950	928	950	0.96
21	21	0.018	2	10.7	0.2	6	23	960	977	960	977	0.99

Sequence Information

Coding Sequence: ATGAACAACGAGGCTGAACAGGGACTTCCACCGAATTCCGCGGACAACCAGCGACCAGCGGTCGAGACATTCAACCTAACAATTGTTACAGACTATTCAACAGTATGCCGCGTGTGTGCCACCGTGACAGAGATGGTGATACCCATCTTCGGTGGGGAGGGTCTGAAGAAGAACCTAGCTGACAAGATAAACCAACACCTGCCTATTACGGTGACGGCGCAGGACACGCTGCCGCTGGTGGTGTGCTACGAGTGCACGAGCACGCTGCTGGCGGCGCACGAGCTGGCGGAGTGTTGCCGGCAGGCCGACAAGGCGCTGCGCACCAGGGAGGCCAAGAGGGCCCGCTCCATAAAGGAAAAGATCGAGGCGAAGCGAGCAGAAGCGAGGCAAGAAAAGGAAAAAGCCGAAGAGAATGCACCCAAGCCCGCGGACGTAGTGTTTACCGCGATAGTTAAGAGTGTGCTCGTCAACTATTACCACACGCTGAACATGGACGAGGACGAGGAGTGCCAGTTCGCGTGCCAGAAGTGCTCGTGGCGCGGAGACACCGCGGCCGGCCTAGCCGAGCATCTGCGGGCGCACCGGCTGCGGGCCGCGGCCGCCGTCGCGCGCTTCATCCGGGAACACATCACCTTCGAGCAGCCGCTCGACTGCGGCGACGGCGCCGGCCCCGCCCCGAGCGCGGCCCGGGAGCCCCCGGACCTGCCCGCGCACTGCTGCCCCTTCTGCGAGAGCGTGTTCTCGTCCGCGGCGCGCCTGGCGCTGCACCTCGCCGAGCACGTCGAGATCAGCGCGGACAGTGCGGTGGAGTGCTGCGGGAGCGTCTTCAGCGACCGAGCACTTTTCGTGAAACATGCCCAGGCGCGccacgcgcgcgcgccgccgcccggccCCGCGTGCCGCGCCTGCGGCCACCGCGCCGCCTCCCTCGACGCCTTGCAGGAGCACATTCGCGACTCGCACGCCGACGAGGCCGCCGCGCGTCGCCGGCGGACCGACACCGAGCGCGCCGCGCCGACCAACGACCAAAAATACATTCCTACCGCGTGCCCGGATTGCGGGAAGACGTTCTCCAACAAGTACAACATGGCCGTGCATGCGCGGACACATCGCGAACGACCGCAGCGGTTCGGCTGCGACCGCTGTTCGCGGGTCTACTGCAGTCGGGGGGCGCTCGTGACGCACGTGAAGGTCGCGCACGGCGGCCTGCTGCGCTTTGCGTGCGCGGCGTGCGGCGAACGTTTCCAGACGCGCGACGGCCGCGCCCGCCACGCCGCCCTACACACGGGGGAGCGCCCGCACGCCTGCACGGTGGAGGGCTGCTCGAGCGCGTTCCGGAGTCGCAACTCGCTCCTGCGGCATTTGGACGCGCACAACGACCGACGCGCCTACAAATGCCCGTGCGGGAAGGCTTTCCGCCGGAGCTCGCACCTCGCGAACGAACGGTTGCAGGCTTGGTACGAAGTCAGCTCGGATGACTTCTGGCAGAATGGCGACGATGAGGCCGACGACCGGCCGGCCGCGAGCTCGAGTGAAGACGACGACCGTCCGTTGGCGACGCTGGCTTCCGAGAAAGCGGGAGACTCGTATGGCACCTTCTACGCGGCGTTGCTGAATTTTAGAAATCATTTCTTGAATGAGCACGAGACCAAGGCCAGCTATCCCGAGTTTACGGAGTCCAGCGAGGCGGAGCCCGCGGGCGGGTCCGACGCGGACGACTACGACGACCTCTCGAGGAACAACATGAGGAGGGATCGCATGGACGAGGCGACGCGACTCGAGCTGGCTCAAGTTCTGACTCGGATAGACGGCAAGCCGTACTACACGTGCCGGATCTGCGGCAAGAACCTGAGCTCGCCGCACACGTACGTGTTCCACGCGCGCATCCACACCGGCGAGCGGCCCTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGGCTTCAGCGACATCTGACCGAAACGCACGAGCGTCGTCGCCGCCTCGCCTGCCGCCACTGCCACCGGACATTCGCCAACTCGCAGAATTTAAAACAGCATTTACGGACGCACACGGGCGAGAGGCCGTACTCTTGCGCGTCATGCGGGAAACGGTTCGCCCAGTCGGGGTCGCTGCACGCGCACCGCAAGACGCACAGCGCGGCGCTGCCGCACCGCTGCGCGCACTGCGGCGCCGCCTTCCGCCTGCGCGCCGGCCTGGCGCGCCACCGCCTGCGCCACTCGGGCGAGCGGCCGCACGCCTGCCCGCTGTGCGCGCGCGCCTTCCGCACCCGCGGCGAGCTGGCGGCGCACGGCGCGGCGCACGCGGCCGAGCGCGCGCACGCGTGCGGCACGTGCCACGCCACCTTCCGGTCGAGGCGCGCGCTGCGGCACCACGCGCGCCGCCTGCacgagccgcccgcgccgccgccgccgccgccgccgctgtcAAATCCCATCACGCACGTATCGAAAACCGAAACCGAGACTCTAATCGAAAAGTGGACAAGCCCTCTGCCGCCCGCTacggggcggcggcggcggccgtgCGCCGTGTGCGGGCTGTCGTTCTCGGACGCGGGCAACCTGGCGCggcacgcgcgcgccgcgcacgcCGCGCTCCGCCCGCACGCGTGCGGCTGCTGCCCGGCCCGGTTCGCGCGCCGCGACCATCTGCGCGACCACGAACGTACGCATTCCGCGGCGCGCGAGTTCGTGTGCGACCAGTGCGGCGCGGCCTCGCgctcggcggcggcgctgaGGATGCACAGGCGCAGTCATCAGCCGCGCCGGCATCCGTGCCTGCACTGCGGCAAGCAGTTCCGACGGAAAGCCGAACTGGTGGCGCACGTATCCGTGCACACGGGCGAGCGCGCGCACTCGTGTCCGTGCGGCGCCGCCTTCCGGCTCCGCGCGCAGCTGACGCGGCACGAGCGCACGCATCGGCCGCGTTGA
Protein Sequence: MNNEAEQGLPPNSADNQRPAVETFNLTIVTDYSTVCRVCATVTEMVIPIFGGEGLKKNLADKINQHLPITVTAQDTLPLVVCYECTSTLLAAHELAECCRQADKALRTREAKRARSIKEKIEAKRAEARQEKEKAEENAPKPADVVFTAIVKSVLVNYYHTLNMDEDEECQFACQKCSWRGDTAAGLAEHLRAHRLRAAAAVARFIREHITFEQPLDCGDGAGPAPSAAREPPDLPAHCCPFCESVFSSAARLALHLAEHVEISADSAVECCGSVFSDRALFVKHAQARHARAPPPGPACRACGHRAASLDALQEHIRDSHADEAAARRRRTDTERAAPTNDQKYIPTACPDCGKTFSNKYNMAVHARTHRERPQRFGCDRCSRVYCSRGALVTHVKVAHGGLLRFACAACGERFQTRDGRARHAALHTGERPHACTVEGCSSAFRSRNSLLRHLDAHNDRRAYKCPCGKAFRRSSHLANERLQAWYEVSSDDFWQNGDDEADDRPAASSSEDDDRPLATLASEKAGDSYGTFYAALLNFRNHFLNEHETKASYPEFTESSEAEPAGGSDADDYDDLSRNNMRRDRMDEATRLELAQVLTRIDGKPYYTCRICGKNLSSPHTYVFHARIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERRRRLACRHCHRTFANSQNLKQHLRTHTGERPYSCASCGKRFAQSGSLHAHRKTHSAALPHRCAHCGAAFRLRAGLARHRLRHSGERPHACPLCARAFRTRGELAAHGAAHAAERAHACGTCHATFRSRRALRHHARRLHEPPAPPPPPPPLSNPITHVSKTETETLIEKWTSPLPPATGRRRRPCAVCGLSFSDAGNLARHARAAHAALRPHACGCCPARFARRDHLRDHERTHSAAREFVCDQCGAASRSAAALRMHRRSHQPRRHPCLHCGKQFRRKAELVAHVSVHTGERAHSCPCGAAFRLRAQLTRHERTHRPR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00148666;
90% Identity: iTF_00148666;
80% Identity: -