Basic Information

Insect: Apotomis capreana
Gene Symbol: -
Assembly: GCA_947623375.1
Location: OX392516.1:709644-716005[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.22 20 6.9 0.3 1 23 172 194 172 194 0.96

2 21 0.74 68 5.2 0.4 1 23 238 260 238 260 0.93

3 21 1.6 1.4e+02 4.2 0.1 6 23 272 290 272 290 0.92

4 21 2.1 1.9e+02 3.8 0.2 3 23 300 321 299 321 0.92

5 21 2.8e-07 2.6e-05 25.4 0.2 3 23 350 370 348 370 0.97

6 21 0.018 1.6 10.3 0.5 3 23 379 400 377 400 0.96

7 21 0.48 44 5.8 0.0 1 23 406 428 406 428 0.93

8 21 0.074 6.8 8.4 0.4 2 23 435 458 434 458 0.91

9 21 0.039 3.6 9.2 3.5 6 23 468 485 464 486 0.92

10 21 0.14 13 7.5 2.8 1 23 633 655 633 655 0.94

11 21 0.00057 0.052 15.0 2.0 2 23 662 684 661 684 0.92

12 21 2.6e-05 0.0024 19.2 5.5 3 23 692 712 690 712 0.97

13 21 1.8e-05 0.0017 19.7 1.5 1 23 718 740 718 740 0.98

14 21 0.001 0.094 14.2 1.2 1 23 746 768 746 768 0.97

15 21 0.0039 0.36 12.4 0.0 1 23 774 796 774 796 0.90

16 21 0.0093 0.85 11.2 3.6 1 23 802 825 802 825 0.95

17 21 0.00087 0.08 14.4 0.0 3 23 895 916 894 916 0.92

18 21 0.00067 0.061 14.8 2.1 1 23 922 944 922 944 0.96

19 21 0.00074 0.068 14.7 0.0 1 23 950 972 950 972 0.98

20 21 2.3e-05 0.0021 19.4 1.2 1 23 977 999 977 999 0.96

21 21 0.014 1.3 10.6 0.2 6 23 1009 1026 1009 1026 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.22	20	6.9	0.3	1	23	172	194	172	194	0.96
2	21	0.74	68	5.2	0.4	1	23	238	260	238	260	0.93
3	21	1.6	1.4e+02	4.2	0.1	6	23	272	290	272	290	0.92
4	21	2.1	1.9e+02	3.8	0.2	3	23	300	321	299	321	0.92
5	21	2.8e-07	2.6e-05	25.4	0.2	3	23	350	370	348	370	0.97
6	21	0.018	1.6	10.3	0.5	3	23	379	400	377	400	0.96
7	21	0.48	44	5.8	0.0	1	23	406	428	406	428	0.93
8	21	0.074	6.8	8.4	0.4	2	23	435	458	434	458	0.91
9	21	0.039	3.6	9.2	3.5	6	23	468	485	464	486	0.92
10	21	0.14	13	7.5	2.8	1	23	633	655	633	655	0.94
11	21	0.00057	0.052	15.0	2.0	2	23	662	684	661	684	0.92
12	21	2.6e-05	0.0024	19.2	5.5	3	23	692	712	690	712	0.97
13	21	1.8e-05	0.0017	19.7	1.5	1	23	718	740	718	740	0.98
14	21	0.001	0.094	14.2	1.2	1	23	746	768	746	768	0.97
15	21	0.0039	0.36	12.4	0.0	1	23	774	796	774	796	0.90
16	21	0.0093	0.85	11.2	3.6	1	23	802	825	802	825	0.95
17	21	0.00087	0.08	14.4	0.0	3	23	895	916	894	916	0.92
18	21	0.00067	0.061	14.8	2.1	1	23	922	944	922	944	0.96
19	21	0.00074	0.068	14.7	0.0	1	23	950	972	950	972	0.98
20	21	2.3e-05	0.0021	19.4	1.2	1	23	977	999	977	999	0.96
21	21	0.014	1.3	10.6	0.2	6	23	1009	1026	1009	1026	0.99

Sequence Information

Coding Sequence: ATGAACAACGAGGCTGAACAGGGACTTCCACCGAATTCCGCGGACAACCAGCGACCAGCGGTCGAGACATTCAACCTAACAATTGTTACAGACTATTCAACAGTATGCCGCGTGTGTGCCACCGTGACAGAGATGGTGATACCCATCTTCGGTGGGGAGGGTCTGAAGAAGAACCTAGCTGACAAGATAAACCAACACCTGCCTATTACGGTGACGGCGCAGGACACGCTGCCGCTGGTGGTGTGCTACGAGTGCACGAGCACGCTGCTGGCGGCGCACGAGCTGGCGGAGTGCTGCCGGCAGGCCGACAGGGCGCTGCGCACCAGGGAGGCCAAGAGGGCCCGCTCCATAAAGGAAAAGATCGAGGCGAAGCGAGCAGAAGCGAGGCAAGAAAAGGAAAAAGCCGAAGAGAATGCACCAAAGCCCGCGGACGTAGTGTTTATCGCGATAGTTAAGAGTGTGCTCGTCAACTATTACCACACGCTGAACATGGACGAGGACGAGGAGTGCCAGTTCGCGTGCCAGAAGTGCTCGTGGCGCGGAGACACCACGCACGGCCTAGCCGAGCATCTGCGGGCGCACCGGGTGCGGGCCGTGGCCGCCGTCGCGCGCTTCATCCGGGAACACATCACTTTCGAGCAGCCGCTCGACGGCGACGACGGCGCCGGCCCCGCCCCGAGCGCGGCCCGGCCGCCCCCGGAGCTGCCCGCGCACTGCTGCCCCTTCTGCGAGAGCGTGTTCTCGGCCCCGGCGCGCCTGGCGCTGCACCTCGCCGAGCACGTCGAGATCAGCGCGGACAGCGCGGTGGAGTGCTGCGGGAGCGTCTTCAGCGACCGAGCACTTTTCGTGAAACATGCCCAGGCGCGCCACGCGCGCGCGCCGCCGCCCGGCCCCGCGTGCCGCGCCTGCGGCCACCGCGCCGACTCCCTCGCCGCCTTACGGGAACACATTCGCGACTCGCACGCCGACAAGGCCGCCGCGCGTCGCCGGCGGACCGAAAGCGAGCGCGCCGCGCCGACCAAAGACCAAAAATACATTCCCACCGCGTGCCCGGATTGCGGGAAGACGTTCTCCAACAAGTACAACATGGCCGTGCACGCGCGGACCCATCGCGAACGACCGCAGCGGTTCGGCTGCGACCGCTGTTCGCGGGTCTACTGCAGTCGGGGGGCGCTCGTGACGCACGTGAAGGTCGCGCACGGCGGCCTGCTGCGGTTCGCCTGCGCGGCGTGCGGCGAACGTTTCCAGACGCGCGACGGCCGCGCCCGCCACGCCGCCATACACACGGGGGAGTGCCCGCACGCCTGCACGGTCGAGGGCTGCTCGAGCGCGTTCCGGAGTCGCAACTCGCTCCTGCGGCATTTGGACGCGCACAACGACCGACGCGCCTACAAATGCCCGTGCGGGAAGGCTTTCCGCCGGGGCTCGCACCTCGCGTACCACACCACTACGCACCACCGGCCTGCTATCAGTGTGTGCCTCACCCCAGTAACGGTGACCGTTTGTTGCAGGAACGAACGGTTGCAGGCTTGGAACGAAGTCAGCTCGGGTGACTTCTGGCAGAATGGCGACGATGAGGCCGACGACCGGCCGGCCGCGAGCTCGAGTGAAGACGACGACCGTCCGTTGGCGACGCTGGCTTCCGAGAAAGCGGGAGACTCGTATGGCACCTTCTACGCGGCGTTGCTGAATTTTAGAAATCATTTCTTGAATGAGCACGAGACCAAGGCCAGCTATCCCGAGTTCACGGAGTCCAGCGAGGCGGAGCCCGCGGGCGGGTCCGACGCGGACGACTACGACGACCTCTCGAGGAACAACATGAGGAGGGATCGCATGGACGAGGCGACGCGACTCGAGCTGGCTCAAGTTCTGACCCGGATAGACGGCAAGCCGTACTACACGTGCCGGATCTGCGGCAAGCACCTGAGCTCGCCGCACACGTACGTGTTCCACGCGCGCATTCACACCGGCGAGCGGCCCTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGGCTTCAGCGACATCTGACCGAAACGCACGAGCGTCGGCGCCGCCTCGCCTGCCGCCACTGCCACCGGACATTCGCCAACTCGCAGAATTTAAAACAGCATTTACGGACGCACACGGGCGAGCGGCCGTACTCCTGCGCGTCGTGCGGGAAACGGTTCGCCCAGTCGGGGTCGCTGCACGCGCACCGCAAGACGCACAGCGCGGCGCTGCCGCACCGCTGCGCGCACTGCGGCGCCGCCTTCCGCCTGCGCGCCGGCCTGGCGCGCCACCGCCTGCGCCACTCGGGCGAGCGGCCGCACGCCTGCCCGCAGTGCGCGCGCGCCTTCCGCACGCGCGGCGAGCTGGCGGCGCACGGCGCGGCGCACGCGGCCGAGCGCGCGCACGCGTGCGGGACGTGCCGCGCCACCTTCCGGTCGCGGCGCGCGCTGCGGCACCACGCGCGGCGCCTGCACGAGCCGCCCGCGCCGCCGCCGCCGCTGTCGCTGCAGCCCGCCGAACATCCCATGCAGGGGAATCGTTCCTATTTCCGCCTTTTCAACGTCACCTCCCCGATCCTTTCCAGAGATCCCATCACGCACGTATCGAAAACCGAAACCGAGACTCTAATCGAAAAGTGGGCAAGCCCTCTGCCGTCCGCTCCGGGGCGGCGGCGGCGGCCGTGCGCCGCGTGCGGGCTGTCGTTCTCGGACGCGGGCAACCTGGCGCGGCACGCGCGCGCCGCGCACGCCGCGCTGCGCCCGCACGCGTGCGCCCGCTGCCCGGCGCGGTTCGCGCGCCGCGACCATCTGCGCGACCACGAGCGGACGCATTCCGCGGCGCGCGAGTTCGTGTGCGACCAGTGCGGCGCCGCCTCGCGCTCGGCGGCGGCGCTGAGGATGCACCGGCGGAGCCACCAGCCGCGCCGGCATCCGTGCCTGCACTGCGGCAAGCAGTTCCGACGGAAAGCAGAACTGGTGGCGCACGTATCCGTGCACACGGGCGAGCGCGCGCACCCGTGTCCGTGCGGCGCCGCCTTCCGGCTCCGCGCGCAGCTGACGCGGCACGAGCGCACGCATCGGCCGCGCTGA
Protein Sequence: MNNEAEQGLPPNSADNQRPAVETFNLTIVTDYSTVCRVCATVTEMVIPIFGGEGLKKNLADKINQHLPITVTAQDTLPLVVCYECTSTLLAAHELAECCRQADRALRTREAKRARSIKEKIEAKRAEARQEKEKAEENAPKPADVVFIAIVKSVLVNYYHTLNMDEDEECQFACQKCSWRGDTTHGLAEHLRAHRVRAVAAVARFIREHITFEQPLDGDDGAGPAPSAARPPPELPAHCCPFCESVFSAPARLALHLAEHVEISADSAVECCGSVFSDRALFVKHAQARHARAPPPGPACRACGHRADSLAALREHIRDSHADKAAARRRRTESERAAPTKDQKYIPTACPDCGKTFSNKYNMAVHARTHRERPQRFGCDRCSRVYCSRGALVTHVKVAHGGLLRFACAACGERFQTRDGRARHAAIHTGECPHACTVEGCSSAFRSRNSLLRHLDAHNDRRAYKCPCGKAFRRGSHLAYHTTTHHRPAISVCLTPVTVTVCCRNERLQAWNEVSSGDFWQNGDDEADDRPAASSSEDDDRPLATLASEKAGDSYGTFYAALLNFRNHFLNEHETKASYPEFTESSEAEPAGGSDADDYDDLSRNNMRRDRMDEATRLELAQVLTRIDGKPYYTCRICGKHLSSPHTYVFHARIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERRRRLACRHCHRTFANSQNLKQHLRTHTGERPYSCASCGKRFAQSGSLHAHRKTHSAALPHRCAHCGAAFRLRAGLARHRLRHSGERPHACPQCARAFRTRGELAAHGAAHAAERAHACGTCRATFRSRRALRHHARRLHEPPAPPPPLSLQPAEHPMQGNRSYFRLFNVTSPILSRDPITHVSKTETETLIEKWASPLPSAPGRRRRPCAACGLSFSDAGNLARHARAAHAALRPHACARCPARFARRDHLRDHERTHSAAREFVCDQCGAASRSAAALRMHRRSHQPRRHPCLHCGKQFRRKAELVAHVSVHTGERAHPCPCGAAFRLRAQLTRHERTHRPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00149663;
90% Identity: iTF_00149663;
80% Identity: -