Atur012400.2
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- DMRT2
- Assembly
- GCA_905147355.1
- Location
- LR990283.1:30338893-30348178[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-26 5.5e-22 79.0 11.4 1 47 36 82 36 82 0.99 2 2 0.52 6.1e+03 -1.1 0.1 34 44 140 150 137 153 0.77
Sequence Information
- Coding Sequence
- ATGATATCAATTGGTTTGCGTTTTTTGCGGCTTTCATCCAATtgttTTAGAATCGGTGATTTATTCGAGATGCCGAGCGAGAGTGAGGAGGGTCGGAAGGCGCTGCGGACGCCGAAGTGCGCGCGCTGCCGCAACCACGGCGTCATCTCCTGCCTGAAGGGACACAAGCGGCTGTGCCGGTGGCGCGACTGCCGCTGCCCCGGCTGCCTGCTGGTGCTGGAGCGGCAGCGCGTGATGGCCGCGCAGGTGGCTCTGCGCCGGCAGcagggcgcgggcgcgggcgcgggcggcggcgaggCGGCGGCGCTGGCGGCCCGCAAGCGCGCCTACCGCGCGCGCCTGCGCTGCGTGCAGCTGTCGCGCGCGCTGCCCGCGCCAGCACCTCAATACGCAGTCCCGGGCGGCGACGCGGCATGGTGCGAGCGCGTGCGGCGCCGGCGCGCCTTCGCGGACGCGGAGCTGTCGCGCGGCGCCGCGCTGCCGGCTCCGGCCGCACtgccggctccggctccggctccggctgCGGGCGCGCTGCCGCCGCCGGCGCTGTGGTGCCGCCAgctgctggcggcgctgctGACGAGCTACGCGCCGCCGCCTCCGCCCCGGAGGCCCAAGATCTCCTTCTCCATCGACTCCATCATCGGCGTGCAGTGA
- Protein Sequence
- MISIGLRFLRLSSNCFRIGDLFEMPSESEEGRKALRTPKCARCRNHGVISCLKGHKRLCRWRDCRCPGCLLVLERQRVMAAQVALRRQQGAGAGAGGGEAAALAARKRAYRARLRCVQLSRALPAPAPQYAVPGGDAAWCERVRRRRAFADAELSRGAALPAPAALPAPAPAPAAGALPPPALWCRQLLAALLTSYAPPPPPRRPKISFSIDSIIGVQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00148517;
- 90% Identity
- iTF_00148517;
- 80% Identity
- -