Atur006923.2
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- -
- Assembly
- GCA_905147355.1
- Location
- LR990281.1:37726454-37729022[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-32 7e-29 103.0 0.7 121 275 3 153 1 153 0.96 2 2 1.5 7e+03 -2.0 0.0 118 130 196 208 183 243 0.50
Sequence Information
- Coding Sequence
- ATGTGTCCGGCGAGGCTGCTGGCGTCCGTGGCCGCCAACGTGGTGGCGCCCGTGTTGCTGACCGCCGTCCGAGGCTGGGACCCCACGGGCGACACGCAGCCGCTGCATCACTGGGTGCTGCCGTGGCATGAACTAGCCGGTGAGGCGCTGGCGACGTCGGTGTACCCCCTGATCCGGTCGCGGCTGGCGGCGGCGCTGGCGGCGTGGCACCCGGCGGACGGGTCGGCGCGGCCGCTGCTGGCCGCCTGGGCCGCGGCCTGGGGGCCGGCGCTCACCGCCATGCTGCACCAGCACATCGTGCCCAAGCTGGAGCACTGTCTGCAGCACGCGCCCGTGCATCTGCTGGGCAGGGAGAACACGGCGTGGCTGTGGTGCGTGGACTGGCTGGAGCTGCTGGGCGCGCCGACGGTGGCGGCCatcgcggcgcgcgcgctgctgcCGCGCTGGCTGGCGGCGCTGGCGGCCTGGCTCAACAGCGCGCCCACACACGCGGCCGTGCTCAACAGCTACACGCAGTTCAAGGTCAGTGGTGTAGTTATATGTTGTTCGGCCatcgcggcgcgcgcgctgctgcCGCGCTGGCTGGCGGCGCTGGCGGCCTGGCTCAACAGCGCGCCCACACACGCGGCCGTGCTCAACAGCTACACGCAGTTCAAGAAAATCTTCCCAGACGAGGTGCTAAAGGAGCCGGGCGTGCGCGACGCGTTCCGCAAGGCGCTGGACATGATGAACCGCTCGGCCGACATCGACGcggtgccgccgccgccgccgcgcctcGCGCCGCCGCTCGCGCAGGACAAGGACGTCTCCAAGCTGGCTGATGCGCTCGCCTCCACCACGCAGCAGAAGTCCTTCTCAGAATTACTGGAATCCCGCTGCACGGAGCGCGGCATCACGCTGGTGCCGATCGCGGGCAAGTCGCGCGAGGGCCGCCCGCTGTACCGGCTCGGCGCCGCCATGCAGTGCTACGTCATCAGGAACGTCATCATGTACTCCGGCGACGGCGGCCGCAGCTTCGAGCCCGTCGGGTTGGACAAGCTGCTGGCCATGGCCGAGGAGTAA
- Protein Sequence
- MCPARLLASVAANVVAPVLLTAVRGWDPTGDTQPLHHWVLPWHELAGEALATSVYPLIRSRLAAALAAWHPADGSARPLLAAWAAAWGPALTAMLHQHIVPKLEHCLQHAPVHLLGRENTAWLWCVDWLELLGAPTVAAIAARALLPRWLAALAAWLNSAPTHAAVLNSYTQFKVSGVVICCSAIAARALLPRWLAALAAWLNSAPTHAAVLNSYTQFKKIFPDEVLKEPGVRDAFRKALDMMNRSADIDAVPPPPPRLAPPLAQDKDVSKLADALASTTQQKSFSELLESRCTERGITLVPIAGKSREGRPLYRLGAAMQCYVIRNVIMYSGDGGRSFEPVGLDKLLAMAEE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -