Atur005947.1
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- REL
- Assembly
- GCA_905147355.1
- Location
- LR990281.1:22905718-22919288[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-34 1.3e-30 108.3 0.0 1 168 16 196 16 197 0.85 2 2 1.8 2.2e+04 -3.1 0.0 97 114 271 288 266 301 0.61
Sequence Information
- Coding Sequence
- ATGTCGAGCGGTGACCACTCCATCCCATCCAGCCTCACGCCAACTGTAACCATCACAGAGCAGCCTGCTCAGATATATAGGTTCCGTTATGTGAGTGAAATTGATAAAGCGCGATTCTTCGGGTCGCTCCCGGGTTCTTCTACAGACAATAGAAGTTACCCTGCCATACGACTTGATGGATACCAGGGACCTTACGCAGTGCTTCTGTCACTCATCAATTCTGAAAATAATTATGTTCACCCTCACACCGTCAGGGGGACAGATCCACGTTACATCTGCACGAACGGGACGATCTATGTTATCACAGAGACTCCTGAGGTCAAGTTCAAAAATATAGGCATTATATGCGTTAAGGAAAAGACAAAAGCAGACGTCAGAGAAGCGCTGACAAATCGGCAGGAAATGGCTGTTGATCCTTTCAGAGCTGGCTATGCCCACTTGGAGAACCATTCGCTGATAGACTTTACCACAGTTCGTCTCTGCTTCCAAGTGTTTTTACCCGATAATGACTGGACTCCGGCTGACGTGTACGATCCGACGAAATACTCCACGCCTTTGGAACCGGTCACTTCGACCGTTATATACGACGCAAAGAAGTATGGTGACCTGAAAATCAAACATGTTAGCAGCTGTGCTGGACCCTTGTCGGGAGGAACAGAAATGAATATGTGGTGTGAAAAAGAGTTCAAAGGACAAAACCCTGACGTGGTATTCTGTGACAAACGCGGTTGGACGCAGAAGGCCAAAGTTACGGAGTACCATAAGCAGTTGGTTATGAGATTCGACGCACCGCCGTACCCCAATTATAAGGGCTGTAACTGCGCCAAAAAAGTTGAGGTAGATGTGTACCTCGAGCAATCAACCAAGCGCGGCGTGTCACGCAGCTTGTCCGTTACCGTGGCGTATCTACCGAATAATAAGAAGAAGAATCCTCGTAAGTGTCACGGCTCGGCACCGACAATAGGGGCCAGCGGCAGCGACGAGCAGTGGACATAG
- Protein Sequence
- MSSGDHSIPSSLTPTVTITEQPAQIYRFRYVSEIDKARFFGSLPGSSTDNRSYPAIRLDGYQGPYAVLLSLINSENNYVHPHTVRGTDPRYICTNGTIYVITETPEVKFKNIGIICVKEKTKADVREALTNRQEMAVDPFRAGYAHLENHSLIDFTTVRLCFQVFLPDNDWTPADVYDPTKYSTPLEPVTSTVIYDAKKYGDLKIKHVSSCAGPLSGGTEMNMWCEKEFKGQNPDVVFCDKRGWTQKAKVTEYHKQLVMRFDAPPYPNYKGCNCAKKVEVDVYLEQSTKRGVSRSLSVTVAYLPNNKKKNPRKCHGSAPTIGASGSDEQWT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -