Atur019263.1
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- Su(H)
- Assembly
- GCA_905147355.1
- Location
- LR990287.1:6679863-6699373[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-68 8.1e-64 214.9 0.0 1 123 227 349 227 349 0.99
Sequence Information
- Coding Sequence
- ATGCCGCACCAGTTCGGCGCGGGTGGCCTGGGCGCGGTGGGCGCGGTGGGAGGaggctcgccgccgccgccgcagcaCGGAGCGCTGTTCCCGCGGTACGCCAGCGCGGCGgggcccggcgccggcgcctaCCGCCCCGAGGAGCGCCGCCTCACGCGCGAGGCCATGGAACGATACCTCCGCGACCGCGCCGACATGGTTGTCGTCATACTGCACGCTAAAGTCGCGCAGAAATCCTATGGAAACGAGAAACGTTTTTTCTGCCCGCCTCCTTGTATATACCTGTTCGGTGATGGCTGGCGGCTGCGACGTGAGCGCATGCTGCGCGAGGGTGAAACGGAGCAGGCGGCCCAGCTCTGTGCCTTCATCGGTATCGGAAACTCAGACCAGGATATGCAGCAGCTTGACCTTAACAATGGCAAGCAGTATTGCGCAGCTAAGACCCTGTACATATCAGATTCTGATAAACGCAAACACTTTATGTTGTCAGTTAAGATGTTCTATGGAAATGGACATGACATTGGTATATTTAATAGTAAGAGAATTAAAGTTATATCGAAACCATCTAAGAAGAAACAGTCCTTGAAGAATGCAGACTTATGTATTGCAAGTGGCACAAAAGTAGCTTTATTCAATCGATTGCGATCTCAAACTGTATCAACTAGATACCTGCATGTGGAGAATGGGAATTTCCATGCATCATCAACTCAGTGGGGAGCATTCACGATTCACCTCCTGGATGACAATGAGAGTGAGTCGGAGGAGTTTGCAGTGCGAGACGGATATGTCCATTACGGGTCCACTGTGAAGCTGGTCTGCTCTGTTACAGGAATGGCTTTGCCTAGGCTAATAATTAGGAAGGTGGACAAGCAGATGGCCCTCCTCGAGGCTGACGACCCTGTCTCCCAGCTGCACAAGTGCGCGTTCTACATGAAGGACACCGAGCGGATGTACCTGTGCCTGTCTCAGGAGAGGATCATCCAGTTTCAGGCCACGCCGTGCCCTAAGGAGCCCAACAAGGAGATGATCAACGACGGCGCCTGCTGGACGATCATATCCACGGACAAGGCCGAGTACCAGTTCTACGAGGGCATGGGGCCCGTCAGGTCCCCAGTGACGCCGGTGCCGCTCGTCCACTCGCTCAACCTAAACGGCGGCGGCGACGTCGCTATGCTCGAGCTCGCCGGGGACAACTTCACGCCCTCGCTCCAAGTTTGGTTCGGTGACGTGGAGGCCGAGACCATGTACCGGTGCGCCGAGTCCATGCTCTGCGTGGTGCCCGACATATCGCAGTTCCGGGGGCAGTGGCTGTGGGTGCGACAGCCCACACAGGTGCCAGTGTCCCTCGTGCGCAACGACGGCATCATCTACGCCACGGGGCTGACGTTCACGTACACCCCGGAGCCCGGGCCGCGGCCGGCCTGCACGCCGGTGGACGACGTGATGCGGCCCGAGACCGCCGCCACGGCGTGGCACCACGAGCCGCACGCCCCGCACGCGCCGCACGCGCTCCAATAG
- Protein Sequence
- MPHQFGAGGLGAVGAVGGGSPPPPQHGALFPRYASAAGPGAGAYRPEERRLTREAMERYLRDRADMVVVILHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRLRRERMLREGETEQAAQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGNGHDIGIFNSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFAVRDGYVHYGSTVKLVCSVTGMALPRLIIRKVDKQMALLEADDPVSQLHKCAFYMKDTERMYLCLSQERIIQFQATPCPKEPNKEMINDGACWTIISTDKAEYQFYEGMGPVRSPVTPVPLVHSLNLNGGGDVAMLELAGDNFTPSLQVWFGDVEAETMYRCAESMLCVVPDISQFRGQWLWVRQPTQVPVSLVRNDGIIYATGLTFTYTPEPGPRPACTPVDDVMRPETAATAWHHEPHAPHAPHALQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00656907;
- 90% Identity
- iTF_00659230;
- 80% Identity
- -