Acap023158.1
Basic Information
- Insect
- Apotomis capreana
- Gene Symbol
- -
- Assembly
- GCA_947623375.1
- Location
- OX392521.1:13862871-13863212[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-07 0.00042 21.0 0.0 10 32 5 27 4 36 0.91 2 2 3.1e-07 0.00076 20.1 0.0 10 32 64 86 56 95 0.90
Sequence Information
- Coding Sequence
- ATGCAGTGCTTCGAGGCTGTCAAGAGTGGCGCCATGACCGTCCCGGAGGCTGCAGCTTACTACGGAGTGCCCCGGAAGACTGTAGCTGCTAAGATACTGAGCGATAAACGAGGAGGTGAGTACATCTACTTAGTAGAGCGACTCTGCACCTACAAGAACTACACCGGTGATGAGCTGATGCAGTGCTTTGAGGCTGTCAAGAGTGGCACCATGACCGTCCCGGAGGCTGCAGCTTACTACGGAGTGCCCCGGAAGACTGTAGCTGCTAAGATACTGAGCGATAAACGAGGAGGTGAGTACAGCTTAGTTGAGCGACAGCACCTACAAGAACTACACCAGTGA
- Protein Sequence
- MQCFEAVKSGAMTVPEAAAYYGVPRKTVAAKILSDKRGGEYIYLVERLCTYKNYTGDELMQCFEAVKSGTMTVPEAAAYYGVPRKTVAAKILSDKRGGEYSLVERQHLQELHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00149313;
- 90% Identity
- -
- 80% Identity
- -