Anig000069.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aporophyla nigra
Gene Symbol
-
Assembly
GCA_947507805.1
Location
OX382308.1:2364663-2367155[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.5e-08 8.1e-06 26.1 0.0 2 40 24 63 23 65 0.93

Sequence Information

Coding Sequence
atgaataagcccaaaaaaaacacaaaaaggagaagaaaattaggatcgagggcatacagaaattattcagaggaaatgttggaattagcggttgacatggtcgaaaataaaaggatgtcaagtcgggaagcagaaaagagcttcggaatccctcgacggacgatattaaacaaagttaaaaaaattcacttgaaaccagctggaggacaaaagaagctcactgacgaagaggaagaaaagctggcaaacgtattgttagcttcagcagattacggcagccccatgacgaaagtggatgtaaagatgttagtctataaatatgtagaaaaaaaatcacgtactgatttgttcgatagcaaattacccagtgataagtgGGTGGAAGGTTTTTTGAATAGACATCGTTCGAAATTGACCATCAGAACGACTCAAAATATAAAAAAAGTACGGGCTGAGAAAGGATTAGAAGAAATGGAGCAATTCTATGCTAATTTAAGTGAAACGTTACATGATGTACCACCGATGAATATTTTAAACTATGACGAGACTAACCTGTCTGATAATCCAGGTACTACAAAATGTGTTTTTAGGAGGGGCGTCAAATATCCTGAAAGGATACTAAATAGTTCAAAGAGTTGCATTTCCATCATGTTCACTGCAAGCGCTGCTGGGATATGTCTACCAACGTACGTGGTTTATAAATCCTCAAATTTGTATTCCGAGTGGCTTGAAGGAGGCCCAGTCAGAACAAGATACAACTGCTCTAAATCTGGTTGGTTTGACACGGCTTCATTTGAAGATTATTTCAAAACTATAGTTGTTGAGTGGGCGAAACAAATTCCCGGGCCAAAAGTAGTCATTGGCGATAATTTATCATCCCACATAAATATTGAAGTTGTAGAGTTGTGTCAAAAACACAATATAAGGTTGGTATTTTTACCACCAAATTCCACTCACCTAACACAACCGTTGGACGTAGCGTACTTTGGTCCACTCAAAAGAGAATGGAAAAAGATCCTGTTGGATTACAAATTAAAGAATCCAGGACAAACTACCCTCAACAAAAAGCACTTCCCAAAACTTTTGGCACAATTGCTAGAGAATATGAAAGTTAAGGAAAGCAATAACATTATAAGTGGCTTCAGGGCCACAGGAATATGGCCTGTAAATCCAAGAAATGTTTTTAAGAGAATCCCTGAGTATTTCGACGATTCAGAATACGGAATAGATACAAGTTTATTGGATTATCTCAAAGAATCAAGGGCTCCAAAGCCAATGCAAGTGAATAGAAGCAAGAAATTACGCACAGAACCTGGAAAGTCAGTATGTGTTGATGATATCTTGACAAAAATAAATACAAAAAAAATAGTTAAAAGAAAAAATACTAAGGAGGAAACAATAAATACTAACCACGAAAGAGAGACAGAAGAGATTATTACTTTGGGGGATACAGCAAACGAGACAAATTTAGATGAAATTACAGGTGAAATGATAGGAAGGGAAGAAATGATTGTAAACGACATGCCGTCATCTAGAATTATCATTTGCGGAAAACTAGCACAATGGCCCTCATTTTCACCGGTGATCTATAATCCAGCCAGACTTGATACACTGAGTATCAAAATTATCAACATGCATTTAGGTACACCAGCGCACAATACTAACACTCCATTATCCGACGTCTGCTTATTGAATAAAAAATTGAAAAGTGACGGCCAGAATCGCCCGTTTGTGGCTTTTGATGAAAGTGATACTCCAGAGTGTTTACGATCAATGACGAATAGTTCATCTAAAGTTATAATAACCTCAGATGTTAAGGTAACCCCTAAGGAATTAAAGGATATCAAGAAAAAAATCAAATTAGGTACTGAAGCCTTCGGAAAATCAGCTTTGCAGATGAAAATTGTTGCAAAAAAAGTGAACAAAGAAAAAGGGAATACAATATGTAAAAAAAATCGGGGAAATCTAACTACTGGAAGAAAAATAAAGGTTGTAAAGAGGAAGAAACCAAGATCATATTATTGTGAAACTAGTTCTGAATCAGATATTCTGAGTATTGCAAATACAGATGATTCTGAATATGAGACATTCGATGAGTATGTATCAACATGCTTACAAGATAGGGATAACAAAGAAAACTGTGAGCCTGAAAACTTCACTACACCATTTGGTTTCAGTGATATCAGCTATTTTACAAGCGATGTAGGTTTAAAAGAAGATGATTGGGTTGTTGTAAAATTTGCGACAAAGAAAAGCATAAAGCACTTTGTAGGTCGTGTTTTATATATGAAAAACAGTATTCCTACTGTAAAATTTGCAAGGAAAGTGAAAAATGCTAAAGACGGTAAAGTGATTTTCACGTACCCGAACGTGGAGGACGTGTGTGAAGTGAATTGTGATGATGTGGAAATAGTATTACCTCCACCAAATATTTCTAGACGAGGCCAAATCATGTTTGATATTATCTTTGAGCCGTCCTACAATTTACAGTAA
Protein Sequence
MNKPKKNTKRRRKLGSRAYRNYSEEMLELAVDMVENKRMSSREAEKSFGIPRRTILNKVKKIHLKPAGGQKKLTDEEEEKLANVLLASADYGSPMTKVDVKMLVYKYVEKKSRTDLFDSKLPSDKWVEGFLNRHRSKLTIRTTQNIKKVRAEKGLEEMEQFYANLSETLHDVPPMNILNYDETNLSDNPGTTKCVFRRGVKYPERILNSSKSCISIMFTASAAGICLPTYVVYKSSNLYSEWLEGGPVRTRYNCSKSGWFDTASFEDYFKTIVVEWAKQIPGPKVVIGDNLSSHINIEVVELCQKHNIRLVFLPPNSTHLTQPLDVAYFGPLKREWKKILLDYKLKNPGQTTLNKKHFPKLLAQLLENMKVKESNNIISGFRATGIWPVNPRNVFKRIPEYFDDSEYGIDTSLLDYLKESRAPKPMQVNRSKKLRTEPGKSVCVDDILTKINTKKIVKRKNTKEETINTNHERETEEIITLGDTANETNLDEITGEMIGREEMIVNDMPSSRIIICGKLAQWPSFSPVIYNPARLDTLSIKIINMHLGTPAHNTNTPLSDVCLLNKKLKSDGQNRPFVAFDESDTPECLRSMTNSSSKVIITSDVKVTPKELKDIKKKIKLGTEAFGKSALQMKIVAKKVNKEKGNTICKKNRGNLTTGRKIKVVKRKKPRSYYCETSSESDILSIANTDDSEYETFDEYVSTCLQDRDNKENCEPENFTTPFGFSDISYFTSDVGLKEDDWVVVKFATKKSIKHFVGRVLYMKNSIPTVKFARKVKNAKDGKVIFTYPNVEDVCEVNCDDVEIVLPPPNISRRGQIMFDIIFEPSYNLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00038699;
90% Identity
iTF_00147358;
80% Identity
-