Anig021792.1
Basic Information
- Insect
- Aporophyla nigra
- Gene Symbol
- clz9
- Assembly
- GCA_947507805.1
- Location
- OX382297.1:25539732-25541905[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-08 4.7e-06 26.8 0.0 3 41 16 55 14 58 0.90
Sequence Information
- Coding Sequence
- ATGGTGCGCAATTATAAAAAAAAGACTGATTCTAAATACACCTTAGAAACTTTAAAAACAGCTGTATTAGAAGTAAAGAATGGAGACCTTAATTCATATCAAGCATCACGAAAATATGGGATACCGCGTACAACTATAGTAGATCGTGTCAAGCAAAGGCGAGGTGTTGTTAAAGACACACGTGGTAGGCCAACAGAAATCGATGCTGAAAATGAAAGAAGACTAGCTGCTGGCCTACACACTATGGAGAAATATGGCTTCGGCCTCTCCTCAAATGAAACATCAATTTTAGTAACCAAATACATTGAAAGTAATAAACTTAAAACGCAGTTTAAGAATAATACACCAGGATATGATTGGTTTTCTGCGTTTCTTAAAAGAAACAAATTATCCTTAAAAAAGCCGCAAGCTGTAGAAATGTCCAGAAAGGCAGCCTGTGACCCCTTTATTATTGAAGAATATTTTAACACACTCGAAAGTTGCTTGAATGAGCTGGACTTAAAATTTTCCCCTGAGAGAATCTGGAATTTAGACGAATCTAGTTTCAGTAAAGATCCCGAAAAAACTAAAGTTGTAGGTGCAAAAGGTTACGCAAGTACTCGAACCATAGCCTCTGCGGGAAAAGATAACGTAACGGTCTTATTTACTGCTAGCGCCATTGGTGAAAAATTACCTCCACTGATCATATACCGGGGCAAAAACGTATGGGACCAATGGATGTCTAGAAATGCGTTTGAAGGTACCACATACGCGGCAACTAAAAATGGTTGGATAGAATCCAAAGTATTTGAGAAGTATATGCTTGGTACCGTCTTGCCTCACATGACAAGAGAAAAACCATGTTTGTTGATCTACGACGGTCACTCAACTCACATCCAGTTACAAATATTAGAGAAAGCCGCAGAAATGGGTGTAACTATTTTAAAATTGCCTCCGCATGCCAGCCACCTTTTACAACCTTTAGATCTAGCTGTCTTCAAATCCATGAAAGACAAATGGGACGCAAAAATATTGGCATGGCAGCGTTTGAACGTGGGAGCCAAATTACAAAAGGATCAATTCAGCGAGATCTTAGGAGAAGTCTGGAAAGAATTAGATCCTAAGATAATTAGAAATGGCTTTAAAAAAGGGGGTGTGTTCCCATTCAATAGTAATGTGATCCCAGACGAAAAATTTGATCCAGAATCTCTAAAAAGATTTCTAAATTACAAAAATAAAAATATTGAAGTCGGCATACCACCTCTGTCAAACTTATGCTTGAAAATATTAAATAAGGAGAACAATGAGCGGGAAGCTACAAGAAAGCTATTTGAATGTAATCAACAACAGAACCTACCAACTACTTTTAAACCCTCGGAGATTATTATACCCGGTACTAGCAATGGGACTTCAGGAATTCAAATTCTTGAAAATCGTATTATTTCGTTTGAGAATTTGTTGCTTAGCACAATAAAAAAATCTGATAGCACACATAAAGTAAAGAAAAGAAAAGCGGCGAAAGGATGTGAAGTCATTACACGCGAATATTACTTGGAAAAGTTACGATTTGAAGAAGCAGAAAAACAAAAACAAAGAAAAAAAAAATCTTCTAAGAAGAAGAAACCACAGAAGAAAATACCGTATTCATCAGATGAAAGTATTGATGATGAAATAATATTTAGTGATGCCACAGAATCTGATGATTGGAACGCTTATTGTGAAAACGCTCTTCAAGACGACGAAGAACAGGACTGTATTCTTGACCACTCTAATGACGATCAAGTAGTCAATGAAAAGATAAACGATTCAAGACAGGCAGTCATGCTGGACGAACCAAGGCGCCCTCAAGTTGACGATTGGTTAGTAGTTAAGTTTGCGACAAAGAAAACTATCAAGCACTTTGTCGGAAACGTAATTTCAATGAATCTCGATTCCGACATAGTGACCCCAAAAGTCAAATTTCTAAGATTCATTAAGAATAGTAAAATTGATTCATTCCATTACCCCGATGTCGAAGATGTTTCAGTACTCAGACATGACGCTGACATTGTAAAGTTTCTTGAAAAACCCCAAATAACCCGAAGGGGTCATGTTATTTTCAAGGAAAATTTAAAAGCTTTTAATATCCAATAG
- Protein Sequence
- MVRNYKKKTDSKYTLETLKTAVLEVKNGDLNSYQASRKYGIPRTTIVDRVKQRRGVVKDTRGRPTEIDAENERRLAAGLHTMEKYGFGLSSNETSILVTKYIESNKLKTQFKNNTPGYDWFSAFLKRNKLSLKKPQAVEMSRKAACDPFIIEEYFNTLESCLNELDLKFSPERIWNLDESSFSKDPEKTKVVGAKGYASTRTIASAGKDNVTVLFTASAIGEKLPPLIIYRGKNVWDQWMSRNAFEGTTYAATKNGWIESKVFEKYMLGTVLPHMTREKPCLLIYDGHSTHIQLQILEKAAEMGVTILKLPPHASHLLQPLDLAVFKSMKDKWDAKILAWQRLNVGAKLQKDQFSEILGEVWKELDPKIIRNGFKKGGVFPFNSNVIPDEKFDPESLKRFLNYKNKNIEVGIPPLSNLCLKILNKENNEREATRKLFECNQQQNLPTTFKPSEIIIPGTSNGTSGIQILENRIISFENLLLSTIKKSDSTHKVKKRKAAKGCEVITREYYLEKLRFEEAEKQKQRKKKSSKKKKPQKKIPYSSDESIDDEIIFSDATESDDWNAYCENALQDDEEQDCILDHSNDDQVVNEKINDSRQAVMLDEPRRPQVDDWLVVKFATKKTIKHFVGNVISMNLDSDIVTPKVKFLRFIKNSKIDSFHYPDVEDVSVLRHDADIVKFLEKPQITRRGHVIFKENLKAFNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01440969; iTF_01192621; iTF_01192622; iTF_00147351; iTF_00147352; iTF_01192619; iTF_01440968; iTF_00036618; iTF_00973718;
- 90% Identity
- iTF_01440969; iTF_01192621; iTF_01192622; iTF_00147351; iTF_00147352;
- 80% Identity
- -