Abis019918.1
Basic Information
- Insect
- Apomyelois bistriatella
- Gene Symbol
- nfxl1
- Assembly
- GCA_947044225.1
- Location
- CAMRHB010000134.1:557439-559913[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 2.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.032 7.8e+02 0.7 0.4 4 10 169 175 168 175 0.96 3 19 1.6e-07 0.0038 17.6 15.9 3 19 186 202 185 202 0.95 4 19 3.4e-09 8.2e-05 22.9 13.1 1 19 237 255 237 255 0.93 5 19 0.84 2e+04 -3.9 1.9 6 10 280 284 279 284 0.83 6 19 3.3e-10 8.1e-06 26.2 13.4 1 19 290 308 290 308 0.99 7 19 8.1e-07 0.02 15.4 18.3 3 19 345 361 344 361 0.93 8 19 1 2.4e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 19 3e-06 0.072 13.5 18.3 1 18 395 412 395 413 0.97 10 19 2.6e-10 6.2e-06 26.5 12.7 1 19 422 440 422 440 0.99 11 19 2e-05 0.5 10.9 5.6 9 19 488 498 486 498 0.92 12 19 0.00036 8.7 6.9 5.8 1 12 508 518 508 518 0.96 13 19 0.19 4.5e+03 -1.8 3.3 14 18 547 551 547 552 0.85 14 19 0.076 1.8e+03 -0.5 0.4 7 12 567 572 567 572 0.84 15 19 1e-05 0.24 11.9 4.7 1 11 588 598 588 599 0.97 16 19 0.34 8.2e+03 -2.6 1.5 15 18 613 616 612 617 0.82 17 19 8.3e-05 2 8.9 15.3 4 18 630 645 628 646 0.85 18 19 0.24 5.7e+03 -2.1 1.2 5 10 663 668 663 668 0.93 19 19 0.005 1.2e+02 3.3 11.6 1 16 687 701 687 707 0.90
Sequence Information
- Coding Sequence
- ATGGCTCGCCGCTATCGAGATGCGGCAGCTAAACTTCAGCAAAATGTACAGAAACATTTGGAAGTGATGAAGGATCTTTCTTCCTCTGAAGACGAGGATCCTTACGAATCTAACGTCCTCGAAGGAGTGTTCCAGAGCTACTGCAGGGGTGGTGGAGACACACACTTACTAAACCGGACGAGAAATCTTTTAGAAGAGGCATTAAGCGGCCGGTCAATAACATGCCTGATTTGTATAGGCAGCATTAAGCGATCTGATGCTATTTGGACTTGTGAGCACTGCCACTGCTACTTCCATCTCCCCTGCATCCAGAAATGGTCGAACGACAGCATAAGCCTAAGACTTGAAAACCCGCAATCACCTATATCTGTTTTTCGACCTCAAAAAATCGAATGGTGCTGTCCAAAATGCAGACATTCATATTCTAAGGAAGAAATACCTCGTAAGTACCGGTGTTTTTGTGGAAAAACTGATGATCCGCCTCTGCATCCATGGTTGATACCTCATTCCTGTGGAGAAGTCTGTGAGAAGAGACTGTCTTTAGGAGATAATTGTAAACATAAGTGTTTGTTGCTTTGTCATCCTGGTCCATGTCCTCCGTGCCCACAAACAGTTAATGGAGTGTGTTATTGTGAGAAAGAAAGGAAGAGAGTTCGTTGCAGTGCGGCTAAATGGTCATGCGGAGAGCGATGCAAGAAGACTTTGTTATGTAACTCGCATAAGTGTGAGAACATCTGTCACGAAGGTGATTGTCCTCCGTGTACATATACTAGTGTGCAGTCATGTCAGTGTGGCAGTGAGAAGCTCAAACGACCTTGTAATGACCCTGTATGGCAGTGTAAGAAGCCATGCAACAAACCCTATTCCTGCGGTTATCATAAATGTGAGAAAGTCTGCCACTCTGGTTCTTGTGGGTCTTGCCCCAACTCTGGAACACGGTCTTGCCCATGTGGAGCCAACCAACGCTTTGTGCAATGCCCCGATGTTATGGAAACCTGTTTGGGCACTTGTAATAAGAAGCATGAGAATTGCGAACATAGTTGCCCTGAAAAATGTCATAAAGGACCTTGCCCGCCCTGCCAAGTGATGGTTCTAAAGAAATGTTTTTGCTCTGCTCATGAGCGCTCTCTTCCATGCAGTAAAGATTACAAATGTGAAACGAAATGCCGAGGTATGAGACCTTGTGGTAAACATGGCTGCGCACGAAAATGCTGCAATGGCAACTGTCCTCCTTGCGAGAAGATATGCGATAAGCCCCTGCAATGTGGCCGTCATAGATGTACAATGGTCTGCCATCGTGGACCATGCTACCCTTGCCCACTAGAATCCAAAGTCACTTGTAGATGTAAAGAAACATACGTAACAGTCCCTTGTGGCCGAGAAAAGCATGTAAAACCTCCAAAATGCAGTCTTCcatgtaaaattaaatacaagtgTGGACATATGGAAGAAAATAGACATGTTTGTCATTTCGGAGACTGCCCTCCATGCAAGGCCGTGTGttataaaaagtaccctaaGTGTGGTCATGATTGCAAGGCAATTTGTCACGAATTTGTAGCTGTAGTATTCAAGCAAGTTGCAAAACCAGCTACGCCTTGGGAGATAGAACCGCCAAAGACAAAGATAATGAGTTTGGAATGTCCTCCCTGCGAGACACCTGTCTCCCTTGTATGCTTTGGAGAACATGAAACCGAAGAACAGCCGTGCCATTCAGCTAAACGTAGATGTTGCGGCCGACAATGTGGGCGTCCATTGGCTTGTGGTAATCACTCTTGCACTTTACTCTGTCATCTTTACTCTCATGACCCTGATTATCCAAATGTGCCTTATAGTTGCAAGCCTTGTAATAAAGAATGCCTTGTAACCCGTCCAGCGAAATGTGCACACAAATGTTACAAAAGGCAATGTCACCCGGGTCCGTGCCCTCCTTGTGAGATCCTAGAGCGAATTACCTGTCATTGCGGAGTTACAGAATTATATTTACGTTGCAAAGAGCTTTGCAATGCAACTGAAGAAATGCTGTCTTGTAAACAGCAATGTCCTAAAAACTTGAGTTGTGGACATAGATGCCGTAATAACTGTCATTCCAGTGAGTGTGGCAAAGGACAGATATGTACgaagaaaacaaaagttaactGTGCATGCggtattttgaaaaaagaattccCATGCAATATAGTTAAGAGTGGGAAAGCTAATGTAGAATGTGATGAAAAGTGTGAAGCTAAAAAGATTGCAATTAAATTGGAGAAAGAGAAGGAAGAGTTGAGACAGAAAGAGATGGAAGAAGAACGGAACCGTAGGGAATTGGCCAAGTATGAATGGAAGTTGAGcggaaagaagaagaagtataaAGAGAAGAAAATGGTCGTTGAAGTTGACAATAGGAACTTCCTGCAGAAATATTGGATTccaattttatctattttaattgCTGGCTTAGCCATTGTGTATTGTGTTTTGTATGTGTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLEVMKDLSSSEDEDPYESNVLEGVFQSYCRGGGDTHLLNRTRNLLEEALSGRSITCLICIGSIKRSDAIWTCEHCHCYFHLPCIQKWSNDSISLRLENPQSPISVFRPQKIEWCCPKCRHSYSKEEIPRKYRCFCGKTDDPPLHPWLIPHSCGEVCEKRLSLGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAKWSCGERCKKTLLCNSHKCENICHEGDCPPCTYTSVQSCQCGSEKLKRPCNDPVWQCKKPCNKPYSCGYHKCEKVCHSGSCGSCPNSGTRSCPCGANQRFVQCPDVMETCLGTCNKKHENCEHSCPEKCHKGPCPPCQVMVLKKCFCSAHERSLPCSKDYKCETKCRGMRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHRCTMVCHRGPCYPCPLESKVTCRCKETYVTVPCGREKHVKPPKCSLPCKIKYKCGHMEENRHVCHFGDCPPCKAVCYKKYPKCGHDCKAICHEFVAVVFKQVAKPATPWEIEPPKTKIMSLECPPCETPVSLVCFGEHETEEQPCHSAKRRCCGRQCGRPLACGNHSCTLLCHLYSHDPDYPNVPYSCKPCNKECLVTRPAKCAHKCYKRQCHPGPCPPCEILERITCHCGVTELYLRCKELCNATEEMLSCKQQCPKNLSCGHRCRNNCHSSECGKGQICTKKTKVNCACGILKKEFPCNIVKSGKANVECDEKCEAKKIAIKLEKEKEELRQKEMEEERNRRELAKYEWKLSGKKKKYKEKKMVVEVDNRNFLQKYWIPILSILIAGLAIVYCVLYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737154;
- 90% Identity
- -
- 80% Identity
- -