Abis019137.1
Basic Information
- Insect
- Apomyelois bistriatella
- Gene Symbol
- Hr39
- Assembly
- GCA_947044225.1
- Location
- CAMRHB010000124.1:419404-431949[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.061 1.5e+03 -1.3 0.2 114 201 79 172 14 182 0.52 2 4 1 2.4e+04 -7.2 10.5 98 163 243 309 161 353 0.47 3 4 3.2e-08 0.00079 19.4 0.1 1 20 443 462 443 468 0.91 4 4 2.6e-66 6.3e-62 210.7 0.0 151 408 496 762 467 762 0.85
Sequence Information
- Coding Sequence
- ATGTCGAATGAGGCAGACCCGGTGAAGGTGGAAGGAGTCCACGTATCAGTAACTACGATCAGTATGACAGGACCAGAGGCAAGCAATGTTCAATTCTCGTACAGTTCGAGCGGCGTTCGCATCAGTGTGTCTTCAGATCCTCTTGATGAAGACTCCACTGACGCCGAAATCTCCAAGATAGATTTCAACCAACACCAACACGAAGTCAACATGCGGAATAAAAAGAAGCGGTCATCGAGTGGGACACAATGTGACGCCCAGAGTAATGACAGGGAGCGGCCGATGTCTTGGGAGGGCGAGCTGTCAGACTCCGAGATGGTTATCGATACTAGTGTCAATAACGATGAAAACAGCAGCTCGCTAGACCTCCAATCATCCCGGGATTCGATTGACACTCTTCGGAACGTGACCATCAAAACGGAACCCTTGAAAACCGAAGCATTCCAATGCGTGGACGATCAGAGAGTACTGGACCTCAAGTACACAGCACCGCTGCAGCCGCATCAGAGAAGTCATAGTATGAACAGGATATCAGTCCTGACCGACAACACTCCACTTTCGCTCGCTAGGAGGCCGGTTTCCCCCACGAATAGTGCGAAGTCTCTAGGCCTCAACGACCAGAACACCATGCCGATGATGCCGCAGACTTCGCTGGGCGAAGTCCAGAACTTGACCATAAAGAAAGAGACGCAGCTATCTGAACTGAAATGCGAGCCATCAGTGGGCATGGACAAGTTGCTGGGCGCGCTACACGGTTCCCCACTGCTGGGCCGCTTGCCGCGCGTGCAGTCCAGCGCCAGCACGGACTCCGCAGTGCACTCTATGTACACGCACAGCGTATACAGCAGTCCGTCGGCCAGCCCTCGAGCCTCCCGCCACTATACGCCGTCTCTTTCCCGCAATAACAGCGATGCGTCTCATTCGTCTTGCTATTCGTACAGCTCCGAATTCTCGCCTACTCATTCTCCTGTACAGAGTCGTCACCCTCACGTGGTGTACCGCGAGGCAACCGGCCCGCCGTTCCCCGCGTCGCCGGCGCACGACGACGACGCGGACGCCGCCGACGACCGGCTGCACCACCACCAGGGCATCAGCAGGCAGCAGCTCATCAACAGCCCGTGTCCCATATGCGGCGACAAGATCAGCGGCTTTCACTACGGGATATTCTCCTGCGAATCTTGCAAGGGTTTCTTTAAGAGAACAGTCCAGAATCGCAAGAACTACATGTGTTTACGAGGCGGCAACTGTCCGGTCACCGTCGCCACGAGGAAAAAGTGTCCAGCTTGCAGATTTGACAAGTGTTTAGGCTGTGGGATGAAGCTTGAAGCCATACGCGAGGACCGCACAAGAGGGGGTCGCTCAACATACCAGTGTTCATATTCTTTGTCGGGAGCGTCGTCCACTGGCTCGCTGTTGTCAGCACACGTCCCCACTACGTTGAGGCATGCGTCTTCGCTCACATGTgtaaaCGGTCCAGGCTCATACACCAACAGCAGAGGGGAGTCAAGTAACAGTCGGCTAACACCAGACATACCGCCATTATTACAGGAAATAATGGAAGTAGAACACCTCTGGCAGTACAACGAGTCTGAACTGAATCGGCTTGGGAAATCCACCGGCAGTCCGTCTGCCAACCCGCTGTTAGCTGCAAGTGGGATTACAGCACAGAACTCCAGCCCCGATTTCCTGGCAGACCTGTGCAACATCGCCGACCACAGATTGTACAAGATTGTCAAATGGTGCAAGAGCTTGCCGCTTTTTAAGAACATTTctATCGACGACCAAATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTCGGCACGCCCGGCGAGGTGCGGGTGGGAGGGGGCAGGGGGATCACTCTGTCGCAGAGCGCCAAGTTAGGATTGACGCCATGCATAGAGAGAATGCTGAGCTTCACCGACCACTTGAGGAGACTACGAGTTGACCGATACGAGTACGTCGCGCTAAAAGTCATCGTACTACTCACTtcagACGCGCCAGAATTACGCGAAGCGGAGAAAGTGCGCGCGTCGCAGGAGAAAGCGCTGGCGGCGCTGCAAGCGTACACCGCCGCGCACTCGCCCGACACGCCCGCCAAGTTCGGCGAGCTGCTGCTGCGCATCCCGGAGCTGCAGCGGACTTGCCAATTCTTCATGCAAGTCGGCAAAGAAATGCTGAACCCGGCAAATAAAGGTAAAGATGGCGACGGGCCTAGTTTCAACCTTCTCATGGAATTACTGAGGGGCGACCACTGA
- Protein Sequence
- MSNEADPVKVEGVHVSVTTISMTGPEASNVQFSYSSSGVRISVSSDPLDEDSTDAEISKIDFNQHQHEVNMRNKKKRSSSGTQCDAQSNDRERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPLKTEAFQCVDDQRVLDLKYTAPLQPHQRSHSMNRISVLTDNTPLSLARRPVSPTNSAKSLGLNDQNTMPMMPQTSLGEVQNLTIKKETQLSELKCEPSVGMDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQSRHPHVVYREATGPPFPASPAHDDDADAADDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGASSTGSLLSAHVPTTLRHASSLTCVNGPGSYTNSRGESSNSRLTPDIPPLLQEIMEVEHLWQYNESELNRLGKSTGSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVGTPGEVRVGGGRGITLSQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00033911;
- 90% Identity
- iTF_00806824;
- 80% Identity
- iTF_00146532;