Abis002062.1
Basic Information
- Insect
- Apomyelois bistriatella
- Gene Symbol
- -
- Assembly
- GCA_947044225.1
- Location
- CAMRHB010000009.1:816087-817967[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-07 5.2e-05 23.3 0.1 15 39 27 51 16 54 0.84
Sequence Information
- Coding Sequence
- ATGGTGTacaattacaaaagaaaaactgaGCGAGCATCTTGGTCGGAGAGTACCTTAAGAGAAGCAATCAACGAGGCCAAAAAAACTTCAATAAAAAGTGCAGCTACTAAATATGGAATATCATACAGTGTATTGCAGCGACGCATGAAAACAGGTTCCTGTATCAAGAGTCTAGGTAGGTTCAAGCCAATATTTACAGATGATGAAGAGCTAGAGTTAGTACAGCATCTTATGACCCTAGATTCTCTATTCTATGGACTAACTAAGTCTGAATTTTTGCAATTGGTCGGTGAATTTGCTAAGCGCAAAAATAAGCAaacaacgtttaaaaataatactgcaGGAAAGCAATGGTTTAAAAACTTTAAGAAAAAGCATCCAGAAATAGTACTGAGGACCCCAGAATCTACATCCATTGCCAGATTACAAGCATTTAATAGGCCAGCTGTCAATAGGTTCTATGATTTGCTTGAACGAACAGTGGAATCAGAAAGAATTCGTCCAGATATGATTTACAACATGGACGAAACAGGTGTCAGAACGTCATCTACAAGACCACCTAAAGTGCTGTCCGTTTATGGTAAAAAACAAGTGGGAATCGTCAGCAGTTTGGAGAAAGGAACACTGACAACGGTCGTTTGTTGCTGCAGCGCTTCTGGTAACTTTGCACCgcctcctttttttattttcaaacggAAGCGGTTTCAAGCTCGATTGCTGGATGGCGCCCTTCCAGGTTGTGAAGCAGCTGTTTCGGACAGCGGTTGGATTAAcggtgaaatatttttggaatggCTAAGGGTTTTTGTAAGCCGTGTTAGACCAACTCAAGATTGCAAAGCTTTATTGCACTTGGATAATCACGAGTCGCATAAATATTATCCTGCTTTAGACTACGCCTCTAAAAATAACGTCATATTTTTGTCAATTCCTCCCCACACCTCACACAAATTACAGCCTCTAGATGTAGCTGTATACTCCCCATTCAAAACCTACTTTGAAATAGAGgtcaataaatttcaaaagcaaTACCCAGGCAGAGTTATTGGCCAATTTGATGTAGCAAAACTTGTTAGCCAGGCTTATCTGAAAGCAGCTACACCACAAAATGCTCTTAGTGGTTTTCGAGCATCAGGAATTCAACCGTTTGATCGTTATGCTATTGGAGAAGAATATTTTGCACCATCTGCTGTTTACAATCGCGAATTGCTACCTGAAGAACCCTATCGCCATGACGATGGTCATCTTAACCTTCTTCCGATAACGGAAAATGTACCAGCACAGATTTTTGAAGTGGAACATGTTCCATCAGCTGCACCGACGGAAAATATTCAACCCACGCAGACTGAAACAATACACGAAAATCCTGAAAATGCTGAAGTTATAGAGCCAGTAGAAGTGGCAACATTTCCTGCCGCTTTACCACAGGTAAATCGAGGAACAACTACACCCCCGCCAACCATAGGCTTCCAGAATACTAGCCATATACTTCAAGAAATTCATCCACTCCCACAAAATACCcaaaaaaagacaaacagaCGCAGACAGCCACAAAAGTCTGAAATTCTGACAAGTACGCCAATAAAAATTGGGCAGAAAGAGAAATTCGAAAAATCACTAACGAAAAAGGTAAATACATCAAAACCATCTACATCTGGTCAGAAGAGAAAGAAGAGAACGGAAAGGCAAGAGAAAGGGAAGAAGAAAAATGGCAATAACAGCGAAAATGTggatttttattgcattatctGTAAGGAAAAATATGTGAGTCCTCCTAATGAGGACTGGATTCAATGCTCACAATGCCAAGAATGGTCTCATGAATCCTGTACTTCTTATAGTGGGCATGGATCCTACTTTTGTGACATCTGTTTTGATTAG
- Protein Sequence
- MVYNYKRKTERASWSESTLREAINEAKKTSIKSAATKYGISYSVLQRRMKTGSCIKSLGRFKPIFTDDEELELVQHLMTLDSLFYGLTKSEFLQLVGEFAKRKNKQTTFKNNTAGKQWFKNFKKKHPEIVLRTPESTSIARLQAFNRPAVNRFYDLLERTVESERIRPDMIYNMDETGVRTSSTRPPKVLSVYGKKQVGIVSSLEKGTLTTVVCCCSASGNFAPPPFFIFKRKRFQARLLDGALPGCEAAVSDSGWINGEIFLEWLRVFVSRVRPTQDCKALLHLDNHESHKYYPALDYASKNNVIFLSIPPHTSHKLQPLDVAVYSPFKTYFEIEVNKFQKQYPGRVIGQFDVAKLVSQAYLKAATPQNALSGFRASGIQPFDRYAIGEEYFAPSAVYNRELLPEEPYRHDDGHLNLLPITENVPAQIFEVEHVPSAAPTENIQPTQTETIHENPENAEVIEPVEVATFPAALPQVNRGTTTPPPTIGFQNTSHILQEIHPLPQNTQKKTNRRRQPQKSEILTSTPIKIGQKEKFEKSLTKKVNTSKPSTSGQKRKKRTERQEKGKKKNGNNSENVDFYCIICKEKYVSPPNEDWIQCSQCQEWSHESCTSYSGHGSYFCDICFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00146362;
- 90% Identity
- iTF_00146362;
- 80% Identity
- -