Abis002531.1
Basic Information
- Insect
- Apomyelois bistriatella
- Gene Symbol
- -
- Assembly
- GCA_947044225.1
- Location
- CAMRHB010000011.1:6131524-6133405[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-07 4.9e-05 23.4 0.1 15 39 27 51 16 54 0.84
Sequence Information
- Coding Sequence
- ATGGTGTacaattacaaaagaaaaactgaGCGAGCATCTTGGTCGGAGAGTACCTTAAGAGAAGCAATCAACGAGGCCAAAAAAACTTCAATAAAAAGTGCAGCTACTAAATATGGAATATCATACAGTGTATTGCAGCGACGCATGAAAACAGGTTCCTGTATCAAGAGTCTAGGTAGGTTCAAGCCAATATTTACAGATGATGAAGAGCTAGAGTTAGTACAGCATCTTATGACCCTAGATTCTCTATTCTATGGACTAACTAAGTCTGAATTTTTGCAATTGGTCGGTGAATTTGCTAAGCGCAAAAATAAGCAaacaacgtttaaaaataatactgcaGGAAAGCAATGGTTTAAAAACTTTAAGAAAAAGCATCCAGAAATAGTACTGAGGACCCCAGAATCTACATCCATTGCCAGATTACAAGCATTTAATAGGCCAGCTGTCAATAGGTTCTATGATTTGCTTGAACGAACAGTGGAATCAGAAAGAATTCGTCCAGATATGATTTACAACATGGACGAAACAGGTGTCAGAACGTCATCTACAAGACCACCTAAAGTGCTGTCCGTTTATGGTAAAAAACAAGTGGGAATCGTCAGCAGTTTGGAGAAAGGAACACTGACAACGGTCGTTTGTTGCTGCAGCGCTTCTGGTTGTGAAGCAGCTGTTTCGGACAGCGGTTGGATTAAcggtgaaatatttttggaatggCTAAGGGTTTTTGTAAGCCGTGTTAGACCAACTCAAGATTGCAAAGCTTTATTGCTCTTGGATAATCACGAGTCGCATAAATATTATCCTGCTTTAGACTACGCCTCTAAAAATAACGTCATATTTTTGTCAATTCCTCCCCACACCTCACACAAATTACAGCCTCTAGATGTAGCTGTATACTCCCCATTCAAAACCTACTTTGAAATAGAGgtcaataaatttcaaaagcaaTACCCAGGCAGAGTTATTGGCCAATTTGATGTAGCAAAACTTGTTAGCCAGGCTTATCTGAAAGCAGCTACACCACAAAATGCTCTTAGTGGTTTTCGAGCATCAGGAATTCAACCGTTTGATCGTTATGCTATTGGAGAAGAATATTTTGCACCATCTGCTGTTTACAATCGCGAATTGCTACCTGAAGAACCCTATCGCCATGACGATGGTCATCTTAACCTTCTTCCGATAACGGAAAATGTACCAGCACAGATTTTTGAAGTGGAACATGTTCCATCAGCTGCACCGACGGAAAATATTCAACCCACGCAGACTGAAACAATACACGAAAATCCTGAAAATGCTGAAGTTATAGAGCCAGTAGAAGTGGCAACATTTCCTGCCGCTTTACCACAGGTAAATCGAGGAACAACTACACCCCCGCCAACCATAGGCTTCCAGAATACTAGCCATATACTTCAAGAAATTCATCCACTCCCACAAAATACCcaaaaaaagacaaacagaCGCAGACAGCCACAAAAGTCTGAAATTCTGACAAGTACGCCAATAAAAATTGGGCAGAAAGAGAAATTCGAAAAATCACTAACGAAAAAGGTAAATACATCAAAACCATCTACATCTGGTCAGAAGAGAAAGAAGAGAACGGAAAGGCAAGAGAAAGGGAAGAAGAAAAATGGCAATAACAGCGAAAATGTggatttttattgcattatctGTAAGGAAAAATATGTGAGTCCTCCTAATGAGGACTGGATTCAATGCTCACAATGCCAAGAATGGTCTCATGAATCCTGTACTTCTTATAGTGGGCATGGATCCTACTTTTGTGACATCTGTTTTGATTAG
- Protein Sequence
- MVYNYKRKTERASWSESTLREAINEAKKTSIKSAATKYGISYSVLQRRMKTGSCIKSLGRFKPIFTDDEELELVQHLMTLDSLFYGLTKSEFLQLVGEFAKRKNKQTTFKNNTAGKQWFKNFKKKHPEIVLRTPESTSIARLQAFNRPAVNRFYDLLERTVESERIRPDMIYNMDETGVRTSSTRPPKVLSVYGKKQVGIVSSLEKGTLTTVVCCCSASGCEAAVSDSGWINGEIFLEWLRVFVSRVRPTQDCKALLLLDNHESHKYYPALDYASKNNVIFLSIPPHTSHKLQPLDVAVYSPFKTYFEIEVNKFQKQYPGRVIGQFDVAKLVSQAYLKAATPQNALSGFRASGIQPFDRYAIGEEYFAPSAVYNRELLPEEPYRHDDGHLNLLPITENVPAQIFEVEHVPSAAPTENIQPTQTETIHENPENAEVIEPVEVATFPAALPQVNRGTTTPPPTIGFQNTSHILQEIHPLPQNTQKKTNRRRQPQKSEILTSTPIKIGQKEKFEKSLTKKVNTSKPSTSGQKRKKRTERQEKGKKKNGNNSENVDFYCIICKEKYVSPPNEDWIQCSQCQEWSHESCTSYSGHGSYFCDICFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00146369; iTF_00146370; iTF_00146371; iTF_01302279; iTF_00146364; iTF_00146365; iTF_00146366; iTF_00146367; iTF_00146368; iTF_01302277; iTF_00072757;
- 90% Identity
- iTF_00146369; iTF_00146370; iTF_00146371; iTF_01302279; iTF_00146364; iTF_00146365; iTF_00146366; iTF_00146367; iTF_00146368; iTF_01302277;
- 80% Identity
- -