Abis010944.1
Basic Information
- Insect
- Apomyelois bistriatella
- Gene Symbol
- -
- Assembly
- GCA_947044225.1
- Location
- CAMRHB010000045.1:616858-618708[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-10 6.5e-08 32.6 0.0 1 40 15 54 15 58 0.82
Sequence Information
- Coding Sequence
- ATGCCAAGAAATCGGCAACGGACCACTGCTAAAGCGGCTTGGACTGAAGATGACCTTCAATCTGCTAAAGCAGCAATTGAAGGAGGTATGTCCAAAAGACAAGCCGCAAAACAATATAACATACCATTTACAACTTTAAGAGACCGACTAAAAAATGACAACATGAGCAACCCAAGACTAGGTCGCAAGCCTGTTTTCACCCAACAACAAGAAAATGAAATTGCTGAACAAGTTAAGTTGCTGGGTTCCCTGTACTATGGACTAAATGTCGCCGATTTGCGTAAACTTGTTTATAAATATGCTGAGCTCAACaatatcaaaaacaattttgatCACAGCAGCAAAACAGCTGGACTGGATTGGGTGCACGCCTTTATGAGACGCAATCCTTCAGTCTCTATACGTAAAGCTGAAGCGACAAGCTTAAATAGAATTTCCGCTTTCAACAAAGAAGAAATAAcacatttttatgataaacttgGCGACTTAATGGAAAAACATAAGTTTATTCCCAGCAACATTTATAACGCTGACGAAACTGGTATCACTACGGTGACAGACCCAGGAAAAGTGCTTGCCAAAAAAGGGCAAAGAAGAGTCGGGTTTGTTGCAAGTGGCGAGCGAGGGAGGAACACAACAGTCATGTGTGCGATGAGTGCAGCCGGAAATTTCATACCACCCATGTTTGTTTTTGCCAGACAGAGAATGACGCCTTTATTAGAAAAAGATGGACCAGCTGGTGCATTATACACCAACTCTAAAAATGGATGGATAAACGAAGATTTATTTGTCACTTGGCTCAAACATTTTGCAGCATTTGCAAAGCCGACCCTAGAATCACCTGTGTTATTAATTCTAGATAATCACAGCAGTCATATTTCGCTCCAAGCTTTTAATTTTTGCAAAGAAAACTACATCATAATGCTTTCCATTCCACCACACAGTTCTCACAGAACACAGCCACTGGATGTGTCTTTCTATGGGCCGCTAAAAACTGCTTATAAACATGAATGCAACAGGCACATGAAGACACATTTACTGTCTACAATAACTCCATATGATATTGCAGGTATTTTCAATAAAGCATATGTACAGGTTGCAAATATAAGTAAAGCAGAATCTGGATTTCGAGCCACAGGAATTTACCCATTGAACCCGAATGTTTTTACTGAACAAGACTTTCTGGCAGCGTCGCTGATGGCACAAGAATCGGAacaaataactgaaaatcaaGATCCTAATATTCAGAATTCTGACGATGTGCAGTGTGATGGCAGGGCTCTAATTTCAGGACATAAATCTCCTGTGGCAGGTCCATCAAATAAGGATCAATGCCCTGAACCAGTTTTGGCAGTTAATCGTAACCAAAAACCTGTTGATGAGCAAAGAACTCCAGTATCCTTTGCTGCTATAGCAATGACACCTACTGCAGCACCATCTTCTAAGCGCGATCAAAGAAAGCGAAAACAACATGCTACCATTTTAACTGCAACTcctatgaaaattattttagaagacaaagaaaagaaaaaagtagaGAAACTTAAGAAGACGGAAAAAAAAGTTGCCAAAGAGAAGAacaaacctaagaaaaaaacatCATACAAGAGAAAAATTTTACAGTCCAGTTCTTCAGATAGTGAAGATGTAGAGCACCTTTGCGACGATGACAGCGATGACGAAATGAATGTGGATGATGAAAATTATAACAAATGCATTATTTGCGAAGAATTTGGAAAAAATAACGAGTTGTGGTATCGTTGCACCATCTGCGGTCTGTGGGCCCATGCTGTATGTTCAGGGTGGGATTCGCCAGATGGATTTATCTGTGATCTGTGTgtccaaaaataa
- Protein Sequence
- MPRNRQRTTAKAAWTEDDLQSAKAAIEGGMSKRQAAKQYNIPFTTLRDRLKNDNMSNPRLGRKPVFTQQQENEIAEQVKLLGSLYYGLNVADLRKLVYKYAELNNIKNNFDHSSKTAGLDWVHAFMRRNPSVSIRKAEATSLNRISAFNKEEITHFYDKLGDLMEKHKFIPSNIYNADETGITTVTDPGKVLAKKGQRRVGFVASGERGRNTTVMCAMSAAGNFIPPMFVFARQRMTPLLEKDGPAGALYTNSKNGWINEDLFVTWLKHFAAFAKPTLESPVLLILDNHSSHISLQAFNFCKENYIIMLSIPPHSSHRTQPLDVSFYGPLKTAYKHECNRHMKTHLLSTITPYDIAGIFNKAYVQVANISKAESGFRATGIYPLNPNVFTEQDFLAASLMAQESEQITENQDPNIQNSDDVQCDGRALISGHKSPVAGPSNKDQCPEPVLAVNRNQKPVDEQRTPVSFAAIAMTPTAAPSSKRDQRKRKQHATILTATPMKIILEDKEKKKVEKLKKTEKKVAKEKNKPKKKTSYKRKILQSSSSDSEDVEHLCDDDSDDEMNVDDENYNKCIICEEFGKNNELWYRCTICGLWAHAVCSGWDSPDGFICDLCVQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158766;
- 90% Identity
- iTF_01507138;
- 80% Identity
- -