Basic Information

Insect: Apolygus lucorum
Gene Symbol: Hivep1
Assembly: GCA_009739505.2
Location: CM019177.2:43547523-43729618[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00079 0.065 13.8 0.1 1 23 76 98 76 98 0.98

2 8 0.022 1.8 9.3 2.5 1 21 104 124 104 128 0.85

3 8 1.3e-05 0.0011 19.4 0.6 1 20 301 320 301 322 0.95

4 8 1.1e-06 9.4e-05 22.8 2.4 1 23 782 804 782 804 0.99

5 8 4.2e-06 0.00035 21.0 2.8 1 23 810 834 810 834 0.92

6 8 1.2e-05 0.001 19.5 0.4 2 23 1173 1194 1172 1194 0.96

7 8 0.00015 0.013 16.1 2.2 1 23 1200 1224 1200 1224 0.93

8 8 0.0055 0.46 11.2 3.4 1 23 1247 1271 1247 1271 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00079	0.065	13.8	0.1	1	23	76	98	76	98	0.98
2	8	0.022	1.8	9.3	2.5	1	21	104	124	104	128	0.85
3	8	1.3e-05	0.0011	19.4	0.6	1	20	301	320	301	322	0.95
4	8	1.1e-06	9.4e-05	22.8	2.4	1	23	782	804	782	804	0.99
5	8	4.2e-06	0.00035	21.0	2.8	1	23	810	834	810	834	0.92
6	8	1.2e-05	0.001	19.5	0.4	2	23	1173	1194	1172	1194	0.96
7	8	0.00015	0.013	16.1	2.2	1	23	1200	1224	1200	1224	0.93
8	8	0.0055	0.46	11.2	3.4	1	23	1247	1271	1247	1271	0.92

Sequence Information

Coding Sequence: ATGATAACAATGGGAGATGTCTGTTGTTTAGATAAACAAGTTCAAGAAAACGGACTGGATGGGTATAAGATGGTTAAAGAGAACGACTCATCGAACAGATATCTCCACAagaaattcaagaaaattgCTACTTTGGAAGACACCtctccaaaaaaagaaaaaggagtTCTGTTTGCGATTCCGTCGGAGGAAAGTGATGAAGCGAAACCCACCTCTGATGGGAGGTATGTCTGCCCTTACTGCAAGCTCTCGTGGTCCAAGCCTTCAGTCCTGCAGAAGCACATTCGAGCTCACACCAACGAAAGACCGTTCCCATGCCTTCCTTGTGGGTTTGCCTTCAAGACCAAAAGCAACCTTTACAAACACTGTAGATCGAGAGCTCATACGCTTAAAATCGACGGACAAAGCTCCGAAGATGACGATGGAGGTTCTCCGTCCTCTGAGTTCTCGAACAAGCCTTACAAacccaaatttcatcttccagaGACGAGCGTGTCCTCGGCTTCCACCTGCTCCTCACCTTTCAGTTCTTCCCCCAGCCCCGATCTCCTCAATGCTCATATCAATAAGCTCATTACGGAAAACCAGGCGATGATCTTCGACACAGACTGGGCATCGAACATCAAGAGGGAAGAAACTCCGTCGCCTCCGAGGAATGGAGATGTCGCCATCATGCTGGCTCAATACCAGCCGGTGCCGGTGTCCCACGAACCTGAAGATTTGTCTTCCACGTCGACGAATTTCGAGCCTCTGAACTtgacagtaaaggaaccaaggAAAAGAGGTATATCGGAAGCGAGCTCCTGCACACTGTCCCCTCCCAAAGAATCCATCATGAAAGACCTTCTCATACGGCACAAGGAGATTCCTGATCTCACTAGAATAACTGAAGAAGTCCTGTATCCCTGTCCTCATTGTAAAGTAGTCTTTCGAACCTCAGATAACCTCAACACCCATTTATTTTCGTGTAAACCTAAGTCTTCCCCAGGCCCTCTGCTAGGCAAAACACCTCTCATCGACACTTTCGTCAAAGATAATATTAAGAAAAGAAAAGTAGACTTCAGTAAATTTGAATGTGCCAAAAGTTCTTTAAAGTTGTTCGGAGGTGAAGTGAAAATTCTTGACACCACTGACAATCGGACTTTAAGATTAGATTTGAATAAGGAGTGCGCGAAAAAAGACGCTCAAGTTTTAACGTTTGCCAAAACAGGACTAAATTCTGTGGGTGGTACAATAGTGCAATCCGAAACgaaagaatccaagaattcGTATCCTGAGAAACTAGTGCTTCCTAGCGTTGCGACTCCAACACTCAAAGTTCCTGGCATCAGCACTCCAGTGCAGATTCCCCAGCTCAGGTTCCCTCCAGCACTGAACCCTTTGACAAGCATAACTGGGTTCAACCCTTTGACTCTTCCACATCCCGCCTCCCTGTCCAAGCTGAGTCCAATGAAAGCCTCTCCGACGCCCTACAACGGCGGCGTGGGCACCATCCTCCACGCTGGCAAGGCCATACCCTTCGTCCCTGGTATGCCAGGACCCAACACGCTTCTTGCCTCTCCACCTCCTCTGGTGCCCTACCAGGAGCAGAGCGTCATCATCAGGTCGCCTCTTCCACCGCTTCCGAAGGAGACTGTCAAGCCACTGCCTTCACCCGTCAAACATGAACCACCAGTGCCACCAGCCGTGGTCGCTAAAACTGAGGAGCTCAAAGAGGTTATCAAAAGGAGCAGCGAAGGTCAGGAAAGGAAATTCCTGAGACCGAGTTCTCTACCTCTGAAGCCTGGAACCTACACTCCCAAGAAGCAGTTGAACACTCCGTCACACTCAACGTCGCTCATCTCCCCTGAAACTCCGCGTCCCAGGAAATCGTATGGTCAGCTCTACCTGAACGGCCACGCTTACACCTACCTGGGCCTGAAATGTTCCACCAAGATGTTTTTCTGCACGCTCAACAAGCCTCAACCCATCTACGTTCCTCTGGCGCCGGATCAATACAAAGTCTCCATGTACTCCAATTGGACGATATGTTCTGACGCGAGTCCGACTCCTCCTGGTCTCGATACGAGAAAAGCCATGTCCAGCTACGACTCGAGAAACAGGAACGGCAGCTACACGTCAGCAAACCGCAGCAAGCAAGATATCATCACTCACTCTTCCTACAAATCCACGCCGATCGAATCCGAAAAAAGTCCTCTCTCGGCAAATGCCACTTTGAAAACCGACGAAAGTGACATTTCTGCCGACAAAATGCAAGTTTGTGAAGGTGGATTTGAGTCTAACGAAGAGTACACGTACATCAGAGGTCGAGAATacttgccattgttaccaggGCGGGGGCGGTACGTGTGCAAAGAGTGTGGGATCCGTTGCAAGAAGCCCTCCATGCTGAAGAAACACATCCGAACGCACACCGATCTCAGGCCTTACACTTGCAAATACTGTGCTTTCAGtttcaaaACGAAAGGTAACTTGACGAAACACATGAAATCGAAAGCTCACTATAAGCGATGTATCGAGCTTGACATCATTCCTGTTCCGACTACGATCGACAGCTGTTACATCGACGACGAAAGCAAGAGCCAAGGTGATTGGAGCTCGAAGGATGATCTCGGGGGAAACGACGACGAATCCGACGAGACTGACGAGGATGAAGATGAAGACGAAGATGAATCGGAAGACGAGGGTTATGAAGGAGACGAGTGTAGGATGGAGCGAGAAGCCGCGAAATCTCTCCTCACTTTATCCGAAGTCACGTTGGAAACTGCTCACCGGCAATACGTCAGCGCTGGCTTGGTCTCTTCGTGCTCCAAACCCCGCACGTACCCTTACTCTTTGTCTCCTCATCAGGTTGAGCCAACCTCGATCGAAAGGGCGGCCAAAGTGGACATGTGGAGGTCTGACGTGTTGTCGCTCACTAAAGACTGCCAGGACTTGAATATCACCGTGAGACTCTCTCCAAGCAGCGAGCCTGCCGAGTCAACACGGCCGATGGATCTCAGCAACAAGTCCGCAGCACTGTTTCAAGGCAGCTCTAAAACTCCTGTGATAACGTCCGTGGGTGGGCAGGCCCACCTGCTCGCCTCCATCTGCTCGACGACGGAGAAATTGCCGACGACCCCGACGACGGAGTATCCCGAGGACAGCAAGCTTCTTCACAAGTACCTGACAGCAGTGACCGTAAGGGATCAGCAGATGAAATTGCAGCAGCAGCAGCGCAAGAGGCTGAAGGAACTCCCTGTTGAGAGGTTACTCGAGCCTGAACCCGCGAAAACAACGCTCCCCCCACCTCAACCGCAGGAGGAAGAAATTAAGAAAGTGGAGGAACCAGTTGCGGAAGAACGAATCCTAGTCCCCAGGAGCGAACCTCCTACTTTGTCTGTGATGTCTTTGAAACGTGCGGATTCTCCGCCCTCGCAAATCTCACCCAGTAGTCCTGGGAACAAGAAACAAGCTGAATTTAGGGAACCCGCTTCAGCCCTTAGTTACATTAGCTCTACCGAGGATGGGAAGAGCATGTGCAGCGTCTGCAATAAAGTGTTCAACAAACCAAGTCAATTGAGGCTTCACGTGAACATCCATTACTTCGAGCGGCCTTTCAGATGCGAATCTTGCGCCGTATCGTTCCGAACCAAAGGCCACCTTCAGAAGCACCTCAGGTCACTTTCTCATCTCAACAAGGTGAGTGTGAACATGAACTCCACGTTCGGGACTGCGACGACGAGCAACCCTAGGCCCTTCAAATGTGACGACTGCAAGATCGCTTTTCGAATTCACGGACACCTCGCAAAACACTTCAGAAGTAAAATGCACATCATGAAGCTCGAGTGTTTGGGGAAGCTGCCTTTCGGGACGTATGCTGAACTGGAGAGATCCGGGATCAATATGAATGATATTGATACGACAGACTGCGAGAACTCCCTAGAGAGTTTACAGGTCCTGGCGCAGAAGCTGTGTCTAGACAAGGACCCATTGAAGCCCGATCACTGGGAAGGCAGCGACCACTCCCGCGACATGATGGGCGGCAGCGCCTCGGAAGACGAAGCCGGAGAGCGAATAGACGTCGGTCGCTCGAGCGACTGCGAACCTGGCGAGGAGACCGTGAGATGA
Protein Sequence: MITMGDVCCLDKQVQENGLDGYKMVKENDSSNRYLHKKFKKIATLEDTSPKKEKGVLFAIPSEESDEAKPTSDGRYVCPYCKLSWSKPSVLQKHIRAHTNERPFPCLPCGFAFKTKSNLYKHCRSRAHTLKIDGQSSEDDDGGSPSSEFSNKPYKPKFHLPETSVSSASTCSSPFSSSPSPDLLNAHINKLITENQAMIFDTDWASNIKREETPSPPRNGDVAIMLAQYQPVPVSHEPEDLSSTSTNFEPLNLTVKEPRKRGISEASSCTLSPPKESIMKDLLIRHKEIPDLTRITEEVLYPCPHCKVVFRTSDNLNTHLFSCKPKSSPGPLLGKTPLIDTFVKDNIKKRKVDFSKFECAKSSLKLFGGEVKILDTTDNRTLRLDLNKECAKKDAQVLTFAKTGLNSVGGTIVQSETKESKNSYPEKLVLPSVATPTLKVPGISTPVQIPQLRFPPALNPLTSITGFNPLTLPHPASLSKLSPMKASPTPYNGGVGTILHAGKAIPFVPGMPGPNTLLASPPPLVPYQEQSVIIRSPLPPLPKETVKPLPSPVKHEPPVPPAVVAKTEELKEVIKRSSEGQERKFLRPSSLPLKPGTYTPKKQLNTPSHSTSLISPETPRPRKSYGQLYLNGHAYTYLGLKCSTKMFFCTLNKPQPIYVPLAPDQYKVSMYSNWTICSDASPTPPGLDTRKAMSSYDSRNRNGSYTSANRSKQDIITHSSYKSTPIESEKSPLSANATLKTDESDISADKMQVCEGGFESNEEYTYIRGREYLPLLPGRGRYVCKECGIRCKKPSMLKKHIRTHTDLRPYTCKYCAFSFKTKGNLTKHMKSKAHYKRCIELDIIPVPTTIDSCYIDDESKSQGDWSSKDDLGGNDDESDETDEDEDEDEDESEDEGYEGDECRMEREAAKSLLTLSEVTLETAHRQYVSAGLVSSCSKPRTYPYSLSPHQVEPTSIERAAKVDMWRSDVLSLTKDCQDLNITVRLSPSSEPAESTRPMDLSNKSAALFQGSSKTPVITSVGGQAHLLASICSTTEKLPTTPTTEYPEDSKLLHKYLTAVTVRDQQMKLQQQQRKRLKELPVERLLEPEPAKTTLPPPQPQEEEIKKVEEPVAEERILVPRSEPPTLSVMSLKRADSPPSQISPSSPGNKKQAEFREPASALSYISSTEDGKSMCSVCNKVFNKPSQLRLHVNIHYFERPFRCESCAVSFRTKGHLQKHLRSLSHLNKVSVNMNSTFGTATTSNPRPFKCDDCKIAFRIHGHLAKHFRSKMHIMKLECLGKLPFGTYAELERSGINMNDIDTTDCENSLESLQVLAQKLCLDKDPLKPDHWEGSDHSRDMMGGSASEDEAGERIDVGRSSDCEPGEETVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00930659;
90% Identity: iTF_00930659;
80% Identity: -