Basic Information

Insect: Apolygus lucorum
Gene Symbol: -
Assembly: GCA_009739505.2
Location: CM019171.2:34627450-34638236[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.7e-05 0.0047 17.4 0.5 1 23 170 193 170 193 0.95

2 16 0.0005 0.041 14.5 0.5 1 23 197 219 197 219 0.97

3 16 2.4 2e+02 2.9 0.4 3 20 595 612 593 617 0.90

4 16 0.89 73 4.2 0.0 3 21 695 713 694 714 0.93

5 16 0.046 3.8 8.3 1.2 2 22 718 738 717 741 0.88

6 16 2.9e-06 0.00024 21.5 0.6 1 23 771 793 771 793 0.98

7 16 0.015 1.3 9.8 0.3 3 23 802 823 801 823 0.94

8 16 0.14 12 6.8 6.2 1 23 828 850 828 850 0.97

9 16 7.1e-05 0.0059 17.1 0.5 1 23 853 876 853 876 0.96

10 16 0.0006 0.05 14.2 0.4 3 23 881 901 880 901 0.97

11 16 1.8e-06 0.00015 22.2 1.8 2 23 908 929 907 929 0.97

12 16 6.1e-05 0.005 17.3 1.0 1 23 935 957 935 957 0.97

13 16 0.0099 0.82 10.4 3.5 1 23 962 984 962 984 0.99

14 16 1.7e-06 0.00014 22.2 0.9 1 23 988 1010 988 1010 0.99

15 16 2.9e-06 0.00024 21.5 0.1 1 23 1016 1038 1016 1038 0.98

16 16 0.023 1.9 9.2 2.9 1 23 1044 1067 1044 1067 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.7e-05	0.0047	17.4	0.5	1	23	170	193	170	193	0.95
2	16	0.0005	0.041	14.5	0.5	1	23	197	219	197	219	0.97
3	16	2.4	2e+02	2.9	0.4	3	20	595	612	593	617	0.90
4	16	0.89	73	4.2	0.0	3	21	695	713	694	714	0.93
5	16	0.046	3.8	8.3	1.2	2	22	718	738	717	741	0.88
6	16	2.9e-06	0.00024	21.5	0.6	1	23	771	793	771	793	0.98
7	16	0.015	1.3	9.8	0.3	3	23	802	823	801	823	0.94
8	16	0.14	12	6.8	6.2	1	23	828	850	828	850	0.97
9	16	7.1e-05	0.0059	17.1	0.5	1	23	853	876	853	876	0.96
10	16	0.0006	0.05	14.2	0.4	3	23	881	901	880	901	0.97
11	16	1.8e-06	0.00015	22.2	1.8	2	23	908	929	907	929	0.97
12	16	6.1e-05	0.005	17.3	1.0	1	23	935	957	935	957	0.97
13	16	0.0099	0.82	10.4	3.5	1	23	962	984	962	984	0.99
14	16	1.7e-06	0.00014	22.2	0.9	1	23	988	1010	988	1010	0.99
15	16	2.9e-06	0.00024	21.5	0.1	1	23	1016	1038	1016	1038	0.98
16	16	0.023	1.9	9.2	2.9	1	23	1044	1067	1044	1067	0.97

Sequence Information

Coding Sequence: ATGCTGAGTGCTTTGAGAAAAAGTGACCTCAAAGAGGACAAGGGCAAGTCGGATCATGTGAAGAAGAAAGAGTACCCTTGCTTCCTCTGCAATGCCAAAAGCACGGAAAAGGGGATTCCACTCCTCGTGAGCCAGACCACTTTCTCCAAGATCTGTTTGGGCGAAAAACTGCAGGAAATCCTTGGCGAGAAATTCATCGTCCTCATCACCTCCAAAGACGCTATCTGCTGGAAGTGCGCCAAGTACATCAACTGGGTTGATAAATGTGAAAGGAAACTCGATCTCGCCAGAGGGAATATCCTCAACATGGTGATCACCAAGTacaaaaatgtggaaatggacCTCACGAGCATATCTCCCAAAGAATCAACTCGTTTCTTACAAAGTGATACCCCGACGAGTATAATCCATACTACTAAAAGTCAAGAAGTCAAAAACTACAAACCTGGCAACATCAGTGATGATGTTGGTGGTTATGAAAAGCCACGAGAGGACAAGAAAAAAACGTACGAATGTCACATCTGTCACAAAGTGTTCGCTTCGCCAGCTGCTTTAGGAGTCCATAAAGCCAGACAACACCCGATCCATCACGTTTGTGATTACTGCGGTATGACTCTGTCTACCGAGGCCAAGTATAAGGCGCACATAGCTAAGCATGGTCCCAAAACTGCTCCGATCGCGAGCAAAATGTTGAATTGTGTCCTGTGTGGTTTTCAAACCAGGAATATGGAAACGTACTGCAGGCACGCATGTGATTCCAAGATTGTATCCTTGGTGTGCACGTCTTGTCGCAAAAGATATATTCACAATAAGACGACTGATCGTATTCCTGGGAAGAACTTGTGTCCTAGCTGCTTAACTGTTGAAGGTGCACAGGTTCCAGTTGAACCAGTGAGTCCAGTAACTCATCCAGTATTGAGCTCTAATAATCAATTTGCTGCTCAACAAATGCATCAACAATCTGTTCAGCAACTGTTACGGCAGTCTTCACAGAATCTCCCTGAGCTATCTCAGAACTCGCCTCCGAAGGGTCCGTTTCCTGTTAAACAAGAAGAGACAATTTTGCCGGAGGTTGATGACGTAGGTGATCCTTTAGCTATGGATGTTGAACATATAGTGGATTCAGGTACGGAAATGACTGCTGAAGGCATGATGGCTTTGGCGGGAATGAATCCTGACGAAATCGCTGCTGATTTAGTGGCCGTAGTGAATTCTGAAAACCTCCATAACCCTGACGACGACACGAATCATTATGATGACCCTACGAGCGCAGTTGAGGATGAACATCTTGGTGAAACCATCATATCTTCCGATCTTCATACTGAAATGCCTGAATTTTTTCGTCCGCCTCAGGAAAAGCGCCTTTCAGATCAAAGCATGGTAGAAAATGCTGGAGACGTGATTGTAAATGCTGAAGACATGATTGAAAATGCAGTCGATGTGATTGAACATGCTGAAGATGGTGAAGCTGAAGGTGAACTAATACTTCCTGTCGACAGCGGGTCTCTATTCAAGTGCGCCAGCTGTCACGAAGAATTTGATATCGATCAAGTTGCTACCCATCCCTGTTTCATCAATGCTGATGCGGACTATGTGGAAGGCGACGTGGATTCAGATTACATCCAAATTCCAGTTTATGATGAACACCAGGAAACTTTGTTGGCTGCTAACGGTGCTGATGGTGTACGTAGAGAACGTAAGGTAAATAGGCGCCGAATACCTAAAATTCCTGCCCAAGAAAATGCCCATTACACTCAGGTAGAACCAGAGACTAAAATGCATTGCAAAACTTGCTACGCAGAGTTCAGAACCATCGGTCTTATGAGGCAGCACTGGGATCTCACGGGACATTCCAGAGAGGTATCGACCACCACAATCGAACTCAACAAAATCAaagacaaaaataataaaaccgaACAAACTTTCAAAGTtgtcaaacaaaattttaacattaGGGCTAACGTAGTTGGTCAAAACGATGAAGATATCAGAAGAACTgatgaacaattgaataattgtaTAATTAAGGTGAAAGAATCGCCAACCATTGAGGAATTCATGTTGCGGAGAGAAGGTAAAATGTGTAACGCTTGCGGCGTTATTTTCGGGGATGAGGAACTGCTTGCAGAACATCAGTGCAACAACTGCTTGACATGTGTAGCATGTCATATAACTTTCATGGACAGCAAGTTACTGAAGAAACATTACCAGTACACGGGACATGCTTCTAAGTTGTACAAGAGAGCTGCGGGAGCTCCAGAATCGCCCCAATTAGTCGAACAGGTTATAGAACATCCCGTCGTGGTTCCATACTACTGCCCTAAGTGTAACAAAACGTTCCCAGCGCGCCCGGCTTTGAGGAAACATCTTCGAAGTCATTATAAGGGCACAATGGGTGGAGCGTGCCATTACTGTCTATTGGAATTTGATGATAAATCTCAAATAAATCAGCATATTCTTGAGGCCCACGGAGCTTATCTTTACAAATGTGATCATTGTGATAAAGCATTCCTTACCAGGTCGGTCTGTAATAAGCATCAAATGAAACACATCATCCACAAATGCCAAGTCTGCGATGTAAGATTTGCCAATCAGAGACTGTTGATTGTCCATATGGATAAAGTGCACAGGTCAAAAGCGtgcagattatgtggaaaaatgaTTACAGACCTGTACGCTCTCAGGCGACATGAAAGGCGCCATTTCTATGATAATGGTCTCAAATGCGATTTCTGTGATAAATCATTCAGAAATAAGTCTTTGCTGAAGGTTCATAATCGAATACATGATGAAGAGGCACAGTACAGGTGTAAGACGTGTCATATAGGATTTAAAACGCCCAGAAATCTTGAAGATCACGAAATCATCCACATAAAGAAGCAATACACGTGCTCCAAGTGCTCGACGGTCTGCCCTTCGAAAAATTTCTACTGGTTGCACATGAAGATGCATGACTTGGCCTACAAATGCAGCGTATGTGGAAGGATGTTCCGAGACACCTCTTTACTCGCCATTCATAAAAGGAAACACTTCCGGGCAAGACCTTACCAATGCCCTAGATGCCCCAGGGTATTCTCAGTGCCTGCAACTCTGCGGAGACATCTCACTGTCCACACCAGGACTTATCCTTTCAAATGTGGATTGTGTAAGAAAGGCTTCCTCACCAAGTATGCCTACCACAAACACCTAGACACTGTGCATGCAGTTCGTAACACGCGTCCTCGCCGTGTCCTCCACCGCATCCCTTCACTGCCGCTGAACGCGACAGATGAAGACCTCCTCCACGCTGCGGACACCTTTATCTCGGATGACGTCATCATGTTCAACGAGTATCAAAAGGACATCACGATCGAGCAGGTCCCCTCCAGTGACATGATCACTGAAGAAGTAGTCGTCGAGACCACTGAACTCTTCGACGAAATACTTCACTAA
Protein Sequence: MLSALRKSDLKEDKGKSDHVKKKEYPCFLCNAKSTEKGIPLLVSQTTFSKICLGEKLQEILGEKFIVLITSKDAICWKCAKYINWVDKCERKLDLARGNILNMVITKYKNVEMDLTSISPKESTRFLQSDTPTSIIHTTKSQEVKNYKPGNISDDVGGYEKPREDKKKTYECHICHKVFASPAALGVHKARQHPIHHVCDYCGMTLSTEAKYKAHIAKHGPKTAPIASKMLNCVLCGFQTRNMETYCRHACDSKIVSLVCTSCRKRYIHNKTTDRIPGKNLCPSCLTVEGAQVPVEPVSPVTHPVLSSNNQFAAQQMHQQSVQQLLRQSSQNLPELSQNSPPKGPFPVKQEETILPEVDDVGDPLAMDVEHIVDSGTEMTAEGMMALAGMNPDEIAADLVAVVNSENLHNPDDDTNHYDDPTSAVEDEHLGETIISSDLHTEMPEFFRPPQEKRLSDQSMVENAGDVIVNAEDMIENAVDVIEHAEDGEAEGELILPVDSGSLFKCASCHEEFDIDQVATHPCFINADADYVEGDVDSDYIQIPVYDEHQETLLAANGADGVRRERKVNRRRIPKIPAQENAHYTQVEPETKMHCKTCYAEFRTIGLMRQHWDLTGHSREVSTTTIELNKIKDKNNKTEQTFKVVKQNFNIRANVVGQNDEDIRRTDEQLNNCIIKVKESPTIEEFMLRREGKMCNACGVIFGDEELLAEHQCNNCLTCVACHITFMDSKLLKKHYQYTGHASKLYKRAAGAPESPQLVEQVIEHPVVVPYYCPKCNKTFPARPALRKHLRSHYKGTMGGACHYCLLEFDDKSQINQHILEAHGAYLYKCDHCDKAFLTRSVCNKHQMKHIIHKCQVCDVRFANQRLLIVHMDKVHRSKACRLCGKMITDLYALRRHERRHFYDNGLKCDFCDKSFRNKSLLKVHNRIHDEEAQYRCKTCHIGFKTPRNLEDHEIIHIKKQYTCSKCSTVCPSKNFYWLHMKMHDLAYKCSVCGRMFRDTSLLAIHKRKHFRARPYQCPRCPRVFSVPATLRRHLTVHTRTYPFKCGLCKKGFLTKYAYHKHLDTVHAVRNTRPRRVLHRIPSLPLNATDEDLLHAADTFISDDVIMFNEYQKDITIEQVPSSDMITEEVVVETTELFDEILH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01365794;
90% Identity: -
80% Identity: -