Aluc019274.1
Basic Information
- Insect
- Apolygus lucorum
- Gene Symbol
- ZNF496
- Assembly
- GCA_009739505.2
- Location
- CM019170.2:36760045-36793475[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.00011 0.0093 16.5 1.2 1 23 215 237 215 237 0.96 2 29 2.5e-05 0.0021 18.5 1.2 1 23 250 272 250 272 0.98 3 29 0.00044 0.036 14.6 1.3 1 23 294 317 294 317 0.97 4 29 0.0028 0.23 12.1 0.2 2 23 324 346 323 346 0.96 5 29 0.76 63 4.5 0.1 1 23 421 444 421 444 0.93 6 29 0.00088 0.073 13.7 1.5 1 23 475 498 475 498 0.95 7 29 0.19 16 6.3 0.8 3 23 506 527 505 527 0.96 8 29 5 4.2e+02 1.9 1.5 1 23 537 559 537 559 0.96 9 29 0.00038 0.031 14.8 1.1 2 23 599 621 599 621 0.96 10 29 0.0041 0.34 11.6 0.1 2 23 700 722 700 722 0.95 11 29 0.0067 0.55 10.9 0.4 1 23 728 751 728 751 0.95 12 29 0.0017 0.14 12.8 2.5 1 23 759 781 759 781 0.97 13 29 0.0035 0.29 11.8 1.1 2 23 847 869 846 869 0.95 14 29 0.0015 0.13 12.9 1.6 2 23 876 897 875 898 0.94 15 29 0.0082 0.68 10.6 3.2 1 21 916 936 916 937 0.95 16 29 7.9e-06 0.00065 20.1 0.8 1 23 956 979 956 979 0.98 17 29 0.0037 0.31 11.7 0.4 1 23 982 1005 982 1005 0.96 18 29 1.2 96 3.9 0.8 2 23 1012 1035 1011 1035 0.91 19 29 1.1 93 3.9 0.5 1 23 1042 1065 1042 1065 0.93 20 29 0.31 26 5.7 1.4 3 23 1073 1093 1071 1094 0.91 21 29 0.005 0.42 11.3 1.3 2 23 1103 1124 1103 1124 0.97 22 29 0.097 8 7.3 1.7 1 19 1129 1147 1129 1151 0.91 23 29 0.26 21 5.9 0.3 2 23 1271 1293 1270 1293 0.94 24 29 6.2 5.2e+02 1.6 4.4 3 23 1301 1321 1299 1322 0.92 25 29 7.3 6.1e+02 1.3 1.5 2 23 1334 1355 1333 1355 0.87 26 29 1.1 89 4.0 0.6 1 23 1367 1390 1367 1390 0.96 27 29 0.00085 0.07 13.7 0.1 2 23 1423 1444 1422 1444 0.97 28 29 0.0013 0.11 13.2 0.3 1 23 1450 1473 1450 1473 0.95 29 29 0.13 11 6.8 0.7 1 20 1478 1497 1478 1499 0.93
Sequence Information
- Coding Sequence
- ATGACGGGTCACGGGGGTGCGGACTACCACGAGCTCTGCCGCCTCTGCGCCTCCTACGATGCCAACAAATTGGACATTTTCAGCGTCGGAGGTCGCGAGAGGAAACTCGTCGACAAGATCACGTCCTGCCTTTCATTCGAGgtCTCGAAAGATGATCTGTACCCGAAGAGCTTGTGTTTTCGATGCATCTACAATTTGGAGAACTTCTACGATTTTCGAAGAGGGTGTATCGACGCCCGGGCGAAGCTGGAGAAGGCCATCAAGCAGTTCAAGCATCTCAAGGACAATCGTCTCCCCGACCTTCCAGAAATTACCATTGAACACAGAACGGTAAAAAAGAAGCCTGCATTCAAGTCGGAGTACGTGAAACCTGAGCTCGTGCGGCCTGAACTCGTGCGACCTGAACTTGTGCGACCTGAACTTGTGCGGCCTGAACTTGTGCGACCTGAACTTGTGCGGCCCGATCTTGCACGAACAGAACTCGCACAACCTGAGTACGTGAAGAGTGAATACGAAGATGAAGATGCGGAGCCTCCAAACCCAACAGATTTCCTTGAAGCATGTTTGGGCGATTCTCCTCACACTTCGACCAATAATCAACCTGGGAGGCTGGATGGAAAGTTGGAAGACGAAGAAGGCCCTTTCCCCTGTAAAACATGCGGTAGACTCTTCAACTCGAAAAGCTCACTCACTATCCACGCTAAgttcCACCAAGACAAGGCGCGAGATGCAGAGGGCGCTGATCCCTACTCCTGCTACGTCTGTGAAAAAGTATTCTCCAGCAAAGGACACTTGGCACTTCATTCGCGGGTTCACATCGGTGAAACTGGTCCTCCAGCGCCACCTCCCGTTCGTCCAGTACCTGCTCAAATAAAGTTATATAGATGTGATCTCTGCAACAAGTCGTATTCAATGGCCAAACATCTGTGGGGCCACGTCAGCACGTCGCACAAAGGCGACCCTCTGGTGACCTGTGGACTCTGTCTCCGCACGTTCTCCTCCATCGCTAACCTCGAAGATCACAAGAGGATCAAACACAGAAACGAACGCGAAGGGCAGgATGAAGGGGATCGTGAAAACCTACAGAAACCTAATGACGATGGACCTCTAGATCTTAGTCAAGAGACACAGCGACAAGACAATGAGAAAAAACAAGAATACAACCCTAGGAAGATCCAGAGAGACAGCAGCGGGAGTTTTCATTCTGAAGGGAACCTGGAAATGGATGTCGATGAATCCAACCAAAACGAGTCGTTGGTTTATTCTTGTTTATTGTGCGGTTTGAAGTGCGATTCGCCTCCGGTGTTGAGCGACCATTTGATAAATGAACACAATTACTACGACCCCATAGATTTCGAGTCTCTTCACAAACAGTACAGGGATCCTGAGCAGTCTGAGAACATGATGGAAGCAGAGACGGTGTTCTGCTGCGAGATTTGCTTTCGAGAGTTCAACGACCGCGCAAGCCTTTGGCTCCACATGCTTTACTCGCACAGGGATGAGGCGTCAAAGGCCTGCGGGATCTGTTTGAAAGTGTGCATTGACAACGAAAGCCTCGGGCAGCATGTTGAGACTTGTCACCCTCGTGAGAAGACTGAGCAGCGACGGTACAGTTGTCAGGTCTGCGCGCGTCAGCACGACTCGCGGAAGAAACTCGTCACTCATGCTCGCATCCACAAACTGCAGGACCCAGAGGGAAATTTGGTTGATCCTGAAACGATCGTCGTTTTGAATAGCGACGTGTACAATGAAAGCCTACCAGCTCAAGTTCCGAACAATGACGGCTTTTTGGCAAGTTGCGACATTTGTTTCAAAGTGTTTGAAAGCGAAGCTAAATTGAATAAACATAAAAGGAGTACTCATAAAGACGGAATGAATAACTCCACCTCGAACAATTACCATTTCTTCTTCGCGTgcgaattgtgcgggttgtcgcATCTCTCGAGGTCGGAGCGGTGGAAGCACATGTTCACAGCTCACGACGGCGATCCTGCTGTGACTTGCGGCATCAAATCGTGCTCCAAGGTGTTTCCAACGAGCGCCGTCAAGAAAGAACACGAAACCTCCCACCACGTCGCCCAAGGTGAGTACCCCAACACGTGCGAAATTTGCGGTAAAATGTGGAAAACGCGAGTCGAGTATTGGAAGCACATGATGGGCGTTCATTCTGAGAGCTTGCCTTTTATTTGCGGCGTTTGTTTGAAAGTTTTTTGTGATTTACAAGGACTCGTGACTCACGTTCGCGAGAGGCACTGGCCTTTGGTGGGAGGAGATTTTTGTTGCGATATTTGCGGGAGGCCGTATTCGAAAATCTCGAAAATGTCTAGACATAGGAAGATACATTTCGCCGTGGATGCTCCCCCAGAACTTCACGAGTTGCTGAACAATTCTAAACTCGATAGCGGAGAGAATCAACATTTTCTTCAGAATCACACCACGGCTTTGACGTGCGATCTTTGCTTAGGGCCGGACACCAAACAAGAGTTCGAGAACATAGACGCCCTAGGGAAGCACAGGCACGAAGCTCACAGCGTGATGCCCTGCGATTTGTGCACCAAGTACTACGGGAGGACATCTCATCTGTGGAAGCACGTGAATAAGATCCACAAAGGCCACCCGGACATTACCTGTCCTGTTTGTGAAAGGACGTCTGCCTCGAGAGCTCATTTGTCGACGCACATGGGGAAACACCACAGAAGTGCCGAAGAAGGTGCTGCATACTCCAAGGCGGACGAAAATGGAGTCCACACGTGTGAGAAATGTTCCAAAATATTCAGAAAAGAGTCTCTCGTTAGAAAACACCTGAAGCACTGCAAAGGACCACGTCCCGCTAAACTCAGTCTGCCTCCTCCAGTGAATGGCGTTTATACTTGCGAACGTTGTCCTAAAACTTTCATAGCTCAAAATTTGCTGAATAAACATATGAGGAGTTCGCACGTCACGTTCAAATGTGAGATCTGTGAAATCAAGTCCAACACCAAGACTGACCTCTTCAACCATGTTGTGACTGAACATGGTGATCACCCCGATGTGAAATGTGCAGTTACAGGATGTGATAAGATACTGAGGTGCAAAGCCGATTTGGACAGGCACCAGAAAAACCATCGGAGCAGCACTCAGTTGCACATTTGCGTCTTTTGCGCTGAAATAGTTACCAGTAAAGTTAAGTTGAAGATGCATTTGAAGGCTCAACACGCCAAAGAGGCGAAGCACCTTTGCGCTCTCTGCCTGAAGGCGACGACAAGCTTCGATGAGCTCAGAAATCACATCGTCGAACACCACGGTGTGATCATCAAACGCCCCAACGTTTGCCAGGTTTGCGCCAAACCGTGTTCCAGCAGGTCCAAGTTGATGGATCACGTGCGAAACCACGGGTCAGAGTTTCATCCTTGTAAAATTTGTCTGAAGATATTCCCCAGCAAAGATGAACTGGATGAACACTGCGACAATCACCCAATTAgtgaagatgaagatgaagaagacaTGGAAGAAGTTGAAGAGCTGGATACAAGTAGTATCATTGATATTATTGGTGCACCCCAAGCTGACGTTGAATCAGTCGACTCTCTGGATGCCAAAAGCATCAGAGATATTATTGGAGCTGGTCAAGACAACATCAAGCTGAACAGAGTGAGCGAATCAGACAAGGAAGATGACGCTCCACCTAccaaaaagataaaaatgagtACCAAAACAGCGAAGAATAAGAATGGTTCAGAGTTCTTGCATCAACTAGGGTTGATGCCAGACGCAGAGAAGAAAAAACCGCGGGAAATACGTCGGGTTTTCGACGACGATTACACTGAAAGTCCCTGCGAGTTGTGTGATAAGGTGTGGCCGGCCAAAAGACACCTTTGGCAGCATTTGATCCGGTTTCATAAAAACGAAGCGGGACGatgctgcggcgtttgtttgaaattatgtTCCAATTACACGAGCTTGAGCGTCCATCTTGCCATTCACCACAGGAAGAATTTCGACGGAGAAGGTTCTAATATGTCTTGTAAAGTGTGTGGAAAATACCACAACGGACGAACGAAACTTCTCAACCACTCGTTGATTCACTTTGGACAGGAAGACCGTGCGAATGACTCGGTCCACCGATGTCTGATTTGCCAATCAGTTTTCCCCCTGTTCCCTTCATTCATTGAACATTTACAGAAAGAACATAACCTAGCTATTGACACAAAAGATGTCAACGTTGTCGAAAATGATAAGCCTGAAGTTACCGCAACGCTGGAAAAGTCGTCGAAATCGCCGTTTTTGAGTTGTGAAATTTGTTCACTGGTGTTCGCAAGTGAGATCGGACTGACCAATCATAAACGAACGCATGAACATTCGGATAGTTTCAAATGTGGGCAGTGCGGGGAGATGTACGGTTCTGCCGATACGTTGAAGATCCACAAACAAGAAAAGCACAAAGGCGACGAATTCGTTTGCGCGGAGTGCAAATCCCATTTCAAATCGTACGAAATGTTGACGGAGCATAATAAGATCTGTCGGGCGAAGCAGAGCAAAACGCCCGACTCCGAGAGCGAAGAAGAGGAAGACGAAAGTGAAGTAGAAACTGGGGAGGCCTATGAATCGGAATCCGAGGCGAATGATTCGTCGTCGGTATCTGATGAGGAAGATGAAGATAACGACGAGGAAGGCGACGTCGAGGAGGTTGAAGAGGACGACGATGAAGCCGACGTTGAAGAGGACGACGAAGAAGCCGATGTCGAAGAAGTTGAAGAAGACGACGAAACCGAAGACGAAGATGAGGAAGACGATATCGCACAAGGAGAAGAGCTCAAAGAGATCCGCGCCATTGAAGCCTACGTCTGCGACAACATGGAAGACAACATGGTTGAAGTAGTCAAAATCGATCTCTCCGACGACATTGACGGAGCTGTCAAAGCATCTTGA
- Protein Sequence
- MTGHGGADYHELCRLCASYDANKLDIFSVGGRERKLVDKITSCLSFEVSKDDLYPKSLCFRCIYNLENFYDFRRGCIDARAKLEKAIKQFKHLKDNRLPDLPEITIEHRTVKKKPAFKSEYVKPELVRPELVRPELVRPELVRPELVRPELVRPDLARTELAQPEYVKSEYEDEDAEPPNPTDFLEACLGDSPHTSTNNQPGRLDGKLEDEEGPFPCKTCGRLFNSKSSLTIHAKFHQDKARDAEGADPYSCYVCEKVFSSKGHLALHSRVHIGETGPPAPPPVRPVPAQIKLYRCDLCNKSYSMAKHLWGHVSTSHKGDPLVTCGLCLRTFSSIANLEDHKRIKHRNEREGQDEGDRENLQKPNDDGPLDLSQETQRQDNEKKQEYNPRKIQRDSSGSFHSEGNLEMDVDESNQNESLVYSCLLCGLKCDSPPVLSDHLINEHNYYDPIDFESLHKQYRDPEQSENMMEAETVFCCEICFREFNDRASLWLHMLYSHRDEASKACGICLKVCIDNESLGQHVETCHPREKTEQRRYSCQVCARQHDSRKKLVTHARIHKLQDPEGNLVDPETIVVLNSDVYNESLPAQVPNNDGFLASCDICFKVFESEAKLNKHKRSTHKDGMNNSTSNNYHFFFACELCGLSHLSRSERWKHMFTAHDGDPAVTCGIKSCSKVFPTSAVKKEHETSHHVAQGEYPNTCEICGKMWKTRVEYWKHMMGVHSESLPFICGVCLKVFCDLQGLVTHVRERHWPLVGGDFCCDICGRPYSKISKMSRHRKIHFAVDAPPELHELLNNSKLDSGENQHFLQNHTTALTCDLCLGPDTKQEFENIDALGKHRHEAHSVMPCDLCTKYYGRTSHLWKHVNKIHKGHPDITCPVCERTSASRAHLSTHMGKHHRSAEEGAAYSKADENGVHTCEKCSKIFRKESLVRKHLKHCKGPRPAKLSLPPPVNGVYTCERCPKTFIAQNLLNKHMRSSHVTFKCEICEIKSNTKTDLFNHVVTEHGDHPDVKCAVTGCDKILRCKADLDRHQKNHRSSTQLHICVFCAEIVTSKVKLKMHLKAQHAKEAKHLCALCLKATTSFDELRNHIVEHHGVIIKRPNVCQVCAKPCSSRSKLMDHVRNHGSEFHPCKICLKIFPSKDELDEHCDNHPISEDEDEEDMEEVEELDTSSIIDIIGAPQADVESVDSLDAKSIRDIIGAGQDNIKLNRVSESDKEDDAPPTKKIKMSTKTAKNKNGSEFLHQLGLMPDAEKKKPREIRRVFDDDYTESPCELCDKVWPAKRHLWQHLIRFHKNEAGRCCGVCLKLCSNYTSLSVHLAIHHRKNFDGEGSNMSCKVCGKYHNGRTKLLNHSLIHFGQEDRANDSVHRCLICQSVFPLFPSFIEHLQKEHNLAIDTKDVNVVENDKPEVTATLEKSSKSPFLSCEICSLVFASEIGLTNHKRTHEHSDSFKCGQCGEMYGSADTLKIHKQEKHKGDEFVCAECKSHFKSYEMLTEHNKICRAKQSKTPDSESEEEEDESEVETGEAYESESEANDSSSVSDEEDEDNDEEGDVEEVEEDDDEADVEEDDEEADVEEVEEDDETEDEDEEDDIAQGEELKEIRAIEAYVCDNMEDNMVEVVKIDLSDDIDGAVKAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00884493;
- 90% Identity
- -
- 80% Identity
- -