Basic Information

Insect: Apolygus lucorum
Gene Symbol: -
Assembly: GCA_009739505.2
Location: CM019173.2:32314131-32395432[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.1 4.3e+03 -2.1 0.1 18 26 83 91 80 97 0.85

2 13 0.014 19 5.5 0.5 18 38 174 195 170 196 0.83

3 13 0.01 14 5.9 2.1 17 36 199 215 190 225 0.76

4 13 0.063 87 3.4 2.6 18 33 228 244 216 250 0.76

5 13 0.015 21 5.4 0.7 15 29 253 267 242 277 0.75

6 13 0.0098 14 5.9 0.3 14 36 280 303 268 306 0.74

7 13 0.021 29 4.9 0.9 6 32 301 327 296 334 0.76

8 13 0.0085 12 6.1 0.9 12 31 334 354 324 362 0.76

9 13 0.027 38 4.5 0.6 12 30 362 381 351 389 0.74

10 13 0.041 57 4.0 0.2 6 29 385 407 384 414 0.80

11 13 0.02 27 5.0 0.2 13 32 419 439 412 445 0.77

12 13 0.00022 0.3 11.3 0.4 6 30 441 465 440 473 0.79

13 13 0.0018 2.4 8.3 0.8 6 34 469 497 468 502 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.1	4.3e+03	-2.1	0.1	18	26	83	91	80	97	0.85
2	13	0.014	19	5.5	0.5	18	38	174	195	170	196	0.83
3	13	0.01	14	5.9	2.1	17	36	199	215	190	225	0.76
4	13	0.063	87	3.4	2.6	18	33	228	244	216	250	0.76
5	13	0.015	21	5.4	0.7	15	29	253	267	242	277	0.75
6	13	0.0098	14	5.9	0.3	14	36	280	303	268	306	0.74
7	13	0.021	29	4.9	0.9	6	32	301	327	296	334	0.76
8	13	0.0085	12	6.1	0.9	12	31	334	354	324	362	0.76
9	13	0.027	38	4.5	0.6	12	30	362	381	351	389	0.74
10	13	0.041	57	4.0	0.2	6	29	385	407	384	414	0.80
11	13	0.02	27	5.0	0.2	13	32	419	439	412	445	0.77
12	13	0.00022	0.3	11.3	0.4	6	30	441	465	440	473	0.79
13	13	0.0018	2.4	8.3	0.8	6	34	469	497	468	502	0.79

Sequence Information

Coding Sequence: ATGGAAAATCCTATAGCTCATCAAACGGGGGAGAGGAAAGAAGGTGACGATGTCTCAAAGATACGGCCCGCGACTAGCTATTGCGGTACTGATTTCACTCAACCTGCTGCTCTGATTGGCGTGGGCACTATGGGCGACGTGAAGGCAGAACTCACAACAGCCCATGCTCTCAAAGTCAGCATGACGCCAGAAGAGCTGAATTCCATCTTCTGCCACGAAGTTTTCGGCTCCCTGAAAGGCGGACATCAGTGCACTGTTTGCGGCAGGGTGTTCCCTTACCGGTATCAACTAATGGTCCACGCCCGATACCACACGCTCCCCGAAGAAAATGGCGGAGGTATCGTAGAAGGTGATGTCGTAGCAGCCGCCGCCGCAGTTGCCAAGGAATGGAACGGTCACGCTCTCGTCGAAGCTCTCCCACAAGCAGCCATTGCCGGAACAGCCACAGCAGTCGTGGCAGCGGCTCCAGCTCCCGCCCCAACGCCCACAGCTACTACTGCAAACGGTCAAAATCCACATGAGTGCCATTTGTGCCCGAAGAAGTTCTCACGGAAGGATCATCTAGACTCCCATTTGAGGGCTCACGAAGCGGACTTCAAATGCCACGTTTGCATGAAAGTGTTCAGTCGAAAAGAACACCTCATCGCTCACGTGCAGTGGCACACCGGATCCTCCCCGCACAGGTGTCATCTGTGTCGGAAAACCTTCACCAGGCGGGAGCATCTGGTAGCGCACGTCCGTCAACACACTGGTGAATCTCCGCACGTTTGCCGTTTCTGCGCCAAGTCCTTCACGAGGAGAGAACACGTCATCAACCACGAGCGCGGGCATACAGGTGAGACGCCGTTCAAGTGTAACCTCTGCCCCAAAGCTTTCGCCAGGCGCGACCACCTGGTCAACCATACTCGTCAACATACAGGGGAAACGCCATGGAGTTGCCTCGAGTGCGGGAAGGCGTTCAGGAGGAAGGAACATCTCACCATTCACACTCGGACTCACACAGGGGAAACACCATGGAGTTGCAACGAGTGCGGGAAGGCGTTCAGAAGGAAGGAACATCTCACCATTCACACTCGGATACACACAGGCGAGACACCATGGAGCTGCACTGAGTGTGGAAAAGCTTTCAGAAGAAAGGAAAACCTCACCATACACGCCCGAATCCACACAGGGGAGACGCCATGGAGTTGCACCGAGTGTGGAAAGGCGTTCAGGAGGAAAGAAACCCTCATCATTCATACTCGGATTCATACAGGAGAGACTCCATGGAGTTGCGGTGAATGCGGAAAGGCCTTTAGGAGGAAGGAACACCTGACTATCCATGCTCGAATTCATACTGGGGAGACCCCTTGGAGTTGCAACGTTTGTGGGAAGGCGTTCAAAAGGAAGGAAACCCTCACCATACATGCACGGATTCACACAGGAGAGACCCCCTGGCGGTGCGGAGAGTGCGGGAAAGCCTTCAGACGAAAGGAGCACCTCACGAAGCACAGTCGAACCCACACAGGTGAACCTCGTCCCCATAAAAAGTCCTGGAAAAATCAACAACagcagcaacaacaacaacaacaacagcagcAGCAACAACAACATCAGAACCAAAACCTGAGTGGAGTGACGATTGGATCGGGCATCCCTCCGGCATTCCCTGGAACTCGACCGCCTCTCCAAAGGCCTCTGACGGTGTCGACAGGAACGAACACGTCTCCTCCCGCTCCTCCATTACCGCCTCCAGCACCGCTCCACATCCCTCAGCACCACCAAAATCTGGATCTCTTCCCTGGCGTGGGACCCCCGTCTCACAACCATCCTCCACCACCCACGCACCATCTGTTCCCTCCTCCACCGCACGATCAGTATCGCTGGCTCAAAGGTCACTTGATGTAA
Protein Sequence: MENPIAHQTGERKEGDDVSKIRPATSYCGTDFTQPAALIGVGTMGDVKAELTTAHALKVSMTPEELNSIFCHEVFGSLKGGHQCTVCGRVFPYRYQLMVHARYHTLPEENGGGIVEGDVVAAAAAVAKEWNGHALVEALPQAAIAGTATAVVAAAPAPAPTPTATTANGQNPHECHLCPKKFSRKDHLDSHLRAHEADFKCHVCMKVFSRKEHLIAHVQWHTGSSPHRCHLCRKTFTRREHLVAHVRQHTGESPHVCRFCAKSFTRREHVINHERGHTGETPFKCNLCPKAFARRDHLVNHTRQHTGETPWSCLECGKAFRRKEHLTIHTRTHTGETPWSCNECGKAFRRKEHLTIHTRIHTGETPWSCTECGKAFRRKENLTIHARIHTGETPWSCTECGKAFRRKETLIIHTRIHTGETPWSCGECGKAFRRKEHLTIHARIHTGETPWSCNVCGKAFKRKETLTIHARIHTGETPWRCGECGKAFRRKEHLTKHSRTHTGEPRPHKKSWKNQQQQQQQQQQQQQQQQHQNQNLSGVTIGSGIPPAFPGTRPPLQRPLTVSTGTNTSPPAPPLPPPAPLHIPQHHQNLDLFPGVGPPSHNHPPPPTHHLFPPPPHDQYRWLKGHLM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01365766;
90% Identity: iTF_00145825;
80% Identity: iTF_00145825;