Aluc007164.1
Basic Information
- Insect
- Apolygus lucorum
- Gene Symbol
- SUB1
- Assembly
- GCA_009739505.2
- Location
- CM019168.2:2599930-2617555[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.1 2e+03 -1.5 0.7 28 37 23 33 21 33 0.80 2 2 3.3e-27 6.4e-23 80.1 0.1 1 51 54 106 54 107 0.96
Sequence Information
- Coding Sequence
- ATGCCGCCAAAAAAGAAGGCCCAAAATGATTCCGACTCCGACACCTCAGACGTTAGCTTAAATTCCGATGATGGAGGTAAGAAACAACCAGCCAAGAAGGCAAAGACTGATTCCAAATCTAAATCATCTTCATCCACCGGAGACTCCGACGAGAAAGTCTTCGAGCTTGGAGGCAACAAGCGAGTCACCGTCAGAGAGTTCAGGGGTAAACTCTACGTCGACATTCGTGAGTTCTACTGTGATAAAAACAGCGGGGATATGAAGCCAGGGAAAAAAGGTGTCTCGCTTCCAGTAAACCTCTGGCGAAAACTCTGTGATGTAAGGGAGGAAATTGATGAAGCCATCAAGAATTCCTAG
- Protein Sequence
- MPPKKKAQNDSDSDTSDVSLNSDDGGKKQPAKKAKTDSKSKSSSSTGDSDEKVFELGGNKRVTVREFRGKLYVDIREFYCDKNSGDMKPGKKGVSLPVNLWRKLCDVREEIDEAIKNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -