Amor016073.1
Basic Information
- Insect
- Apodemia mormo
- Gene Symbol
- zfy1
- Assembly
- GCA_036924255.1
- Location
- JAUPFN010000011.1:4740591-4769798[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 4.3 6e+02 2.6 0.3 2 23 6 27 5 27 0.94 2 13 0.0022 0.3 13.0 0.4 1 23 984 1007 984 1007 0.93 3 13 1.7e-05 0.0023 19.6 1.7 2 23 1110 1131 1109 1131 0.97 4 13 8.1e-05 0.011 17.5 2.8 1 23 1137 1159 1137 1159 0.98 5 13 0.014 2 10.4 3.0 2 23 1166 1187 1165 1188 0.94 6 13 0.32 45 6.2 2.0 5 23 1201 1219 1199 1219 0.97 7 13 0.0074 1 11.3 1.3 3 23 1226 1247 1225 1247 0.97 8 13 0.0081 1.1 11.2 1.0 2 23 1264 1284 1263 1284 0.97 9 13 0.00044 0.061 15.2 1.4 1 20 1290 1309 1290 1312 0.91 10 13 0.0061 0.85 11.6 1.3 1 23 1320 1342 1320 1342 0.98 11 13 0.0077 1.1 11.3 7.7 1 23 1348 1370 1348 1370 0.98 12 13 8.3e-06 0.0011 20.6 1.5 1 23 1376 1400 1376 1400 0.98 13 13 0.001 0.14 14.0 5.1 1 23 1406 1428 1406 1429 0.95
Sequence Information
- Coding Sequence
- atggATCAAAGGGTTCAATGCCCTGTGTGTACACTGTATCTTCACAGTGGGATGTCATTGGAGTCCCACTTGGATACACATCCAAAAGATCAAGTTATTAAGGCACTGTGCAATTTATCTGCTAAAAGTACAAGCTATGGTAGTAGAACATCAACTCCTACACACTCTGAAAGGTCATATAGAAGTCGATCTAGAACACCAGCCACAGAGGACAGCTTGAGATGGGTTAATCAGCATAGAAATATTGAAAATGAGAGGTATTGGAGAAGAACACCAAGTAGGAATAAATCTTCAGTGTCATTGGCAAGCTCAAGGAATGGGACACCTGATATTAGAATGGGAAACATATCATttgaaaataacttaataaatagTCCTGATACTTACGCAGTAAAATTAGATAAACCCCAGCAAACATATGGAACTGAACCAACATCTATGGCTAATTTTGACCAACAATATCCATACTATCCTGAACAACAAGATGACcaagaaattaaattttctcGTAGCTCTGAATACACTGGAATGGAGAgtgcaaataatatttttacttataacaTGCCAACAATATCCCCTGGTATCAAATTGCAAACTACTGTAGTACCGTCAATCTCTAAAAGAGGTAATGATATTGTGAAAATTGTACCTAAGCAAGGAAATCTACTTTTGAAGACTAATGTAGGGGGTGTGCAATACATAACTCCTGGAGTAAAACCCCTACATGTGGTAATGCCTTCTCCATCATTTGTTCAGAAAAATATTCACAGTAACATGATAATGGCTGGTAACATACCAAGTACTCAGATTTTAGATCCAAAAACTGTAGCATCTCCAATTAACAATCAATTCAACCAAATATCCACTGCATCCATCACTCCAGGAACTACAGTTGTTACGCAGAattcacaaattatttatagAGAGATGGTCCATAATATTGATGGCAAACCTTTTATCTCCAGCATGCCAACGGTGCTAAGTGGACATGACACCATATCAAATGTAGCTCAAAGTAGTTCTATGTATCAAAATGTTATGGTAGTGGATCAGTTTGGTAATACTTCATGTATGTATGCTACACCTCAACAGCTGCTGTCTAAACCTTGTGAGGCACCTATTTTCAATGAAACTATTCCACAAATGACTAATATTGAGAAACCTGTGCCTAATATAATTAATGATCCCAATAAAACACTTGTTATTGAAGTTAACCCAATGCTACCTGTAGCAACTACCTCTATGAATGAACCTGGTACAAGTACCGTACCTACACAGACTACAGCTAATGCTAGGCAAGATAAAGTAGGAGTTGAAAAATCTGATTCCAAAAATGACGTCTCAGTGTCTAATAAGgggttaaaaattttaagtaacaTTAAAGTAGAAGTACCAGTTCAACATCACAAGAATATGCTAAATACTGTTATGGATTTAACTGGTCCAAATGAGACGGAATACATACAACGTCCTATAAGTCCAGACAAAATCTTGCCAGATTTAGATGAGAATGCCCCCAATGCAAGTGAAAATAGCTCACAACCTTTTGCAAATAGTGATAATTCAGTCCCTCATGCTTTCTCTGTTATAAAGAATGTTGGTAATCCACCAGCTTATAAAGAGGCTTCTAAAACTACTCCAAGTAGTAAATTAGATGTCGAGTTCTCTGATAGTTGTCCAGTACCTGATCTCATATGTAATGAAAAAGCATCAATCTCACCTTGTAGTGAATTATCAGAACATGGTGATAACTCAGTTGATCACACACTCTCTCCCAAgacagaaaataatgaaattactCCAAACAATAAACCTAATGGTGAAACTGAAAAGACCTCACCGATAAAATCCGCTAGAAGTTTACCATTAAGACTTAATAACATTTATGTGAAGAagcataaaaaaattttacaaataaaaaatgcaaaaacatTGACACCTAGTACAAACACTGAAGCTGATCCATTACCATCATCTTCAAAAGTAcctgaaaattttacaattaaCAAGAAAAATGAAAGTGATGAAGAAAaaaatggtttattacaaaCCATATCAATTGAAaagattaaagaaaacaatgatCATAATTTTGATGCTAATATAGAAGAGCAACCAATGGACATTGAACCAGGAGCTCCATCTTCTTTAAGTTGTGACCAGTACACTTCCAATTCCGATTTAGTTAAAGTTAAAGAAGAAGTAAATATAAGTAATGAGTTTAGCAATGAATCTGTTAGATCAGGTCAAGATATAGCTCCAATGGAAACTCTGCGACCAATTAATGTTATTACTTATGGTAATATGGCAGTTGATGACTTTGATGATGATTCAAATCACAGAGAACTATTAGAACTGGAAGCGGCTTCTAAAAGCAAGCAGTTTGTCACAATGATGAATGAAAATTACTTTGGTGATAATATTTATGCAGATTACTTCACACCAGATCGTGTAGAAACATTTGATGCTGAAAAAGAGTCTGGTTTTGGGAAGGATGCATCAAAAGACACAATGTACATATGGGGTGAGCCATCTCAAAAGGAAGCTGAATTTGTCCTTCCAAACTTTATTCATGAAAGTTACAAAATAGCTGAGAGTGGTGTTGATTACTCTGATATGGCTACAGTGGATGTGCAAATGGAGGGAGAAGGAGATAAGTGTGAAAGAGACACAAAAGCAGAGTTGTTGTGTGAAAGTAGAAGTGAGGAAGAaccaattttaaatatttgtacagaTGAAACAATGCCACCAAGAGGTGAGTTGAGTGGGCAAGAAAGTAATGGAGATTTGGAGTCACCTTGGAGTGGGATACAGATATATTCAGAAGTTCCACCAGCAGAGACCTACGACCTGATCGCACGCGAGAGCTGGGTCTCTGATGGGTCAGACGTAGATGCTAATGAAAAACCGGATACTTTGGAGGAAGAGCTTCATTTCCCGAAGAGAATGTTCACATGTGCACAATGCGGTATCAAGTTCCCAACCATGAAAGAGTTAAGAGCTCACAAATCCTTAACCCATGCACTACCTACATGCTCCAGTACTAAAACCACATATAGTCGGATGGTGACTTCGAGAACAATAAAGAAAGAGGAAAAGCCAGATACAAGCGTTCTTGCAGGAAGTATTCTCCAAATTGACTCTAAAGAAACTATATCATCTACAATCCTGCAAGTGTACAATGTAATGTCGGAGACGAAATCTCAAATAGCTGGATTAATCAAACAAGAAACCAAGAGACGGAGGAAAGATTTTGTATGTCCTACTTGTAAGGAGGATCAATTGACGGATGCTCAGTTTCATGCGCACTTGAAGATTCACCCACTAGAATGTCTAACTTGTGGGAAATGTTTCTTCAGAAGGGCCAACCTGGCGCTTCACATCAAGACACACTTGGGGATAAAGAATTATAAATGTGATATATGCGAAAAGCGCTTCATTACCCGTCAGAAGCTGAATGACCACCACAACATACACACTGGCCGTGCGCCTATCAAGTGCACCGTCTGCAATGACACCTTCAGAAGATACTCCAACATGGTGCAACACAGggaTCGCCACCATTTCAAGAAGAAAGCGAaagtccgcgacttcgtctgtcACTGCGGCGTGGTGTTCCACTCGAAGGCGAAGCTGTTGTGGCACAAGGAGACCCACGAGGAGCGGCCAAAGGCGTGTCAGTACTGCAGCGACAAATTCGTGCACGCCGCCTCGTTAACTCGACACGTACGACGATCTCACAACGAGTATTACTTGTCTGAACAGCGCGCTGGAAAGGCGGAAAACGTGCCGTGCCACATTTGCAAACAGGTATACCTCAGAACGAATCTTCGTGCCCATTTGCAAACACACACCGGCGAACGTCCATACAACTGTGTcatttgcaataaatattttaccacCAAATGGAATCTAAAGTTACACCGTTGGACACACATGAACCGTTCAGCCAAACCATACAAATGTAACTTGTGTAAGGGTGCGTTTATCCGACACACTGAATACGTATCACACATGAACGCACACAAGTCCGTGCGTCCGTATACGTGTAAATACTGCGGTTGTCAGTTCATAAGGAAATATAATTGTCAGCGGCACGTACGGGAGCATGAAATGGCGAAGAAGTACGTTTGTAAAGTGGCTGAGTGCGGGAAAACCTTCCATCGTAGTTATTATTTGTCTGAACATATGAAAGTACACAGTGGTGTGCGGCCATTTTCTTGTAATATTTGTGGAAAAACTTCAAGTAATAAGTCAAATCATAATAAGCATGTGAAGATTCATCATGCCAGAGAGCCAGTCGCTGCTGAGGCGTAA
- Protein Sequence
- MDQRVQCPVCTLYLHSGMSLESHLDTHPKDQVIKALCNLSAKSTSYGSRTSTPTHSERSYRSRSRTPATEDSLRWVNQHRNIENERYWRRTPSRNKSSVSLASSRNGTPDIRMGNISFENNLINSPDTYAVKLDKPQQTYGTEPTSMANFDQQYPYYPEQQDDQEIKFSRSSEYTGMESANNIFTYNMPTISPGIKLQTTVVPSISKRGNDIVKIVPKQGNLLLKTNVGGVQYITPGVKPLHVVMPSPSFVQKNIHSNMIMAGNIPSTQILDPKTVASPINNQFNQISTASITPGTTVVTQNSQIIYREMVHNIDGKPFISSMPTVLSGHDTISNVAQSSSMYQNVMVVDQFGNTSCMYATPQQLLSKPCEAPIFNETIPQMTNIEKPVPNIINDPNKTLVIEVNPMLPVATTSMNEPGTSTVPTQTTANARQDKVGVEKSDSKNDVSVSNKGLKILSNIKVEVPVQHHKNMLNTVMDLTGPNETEYIQRPISPDKILPDLDENAPNASENSSQPFANSDNSVPHAFSVIKNVGNPPAYKEASKTTPSSKLDVEFSDSCPVPDLICNEKASISPCSELSEHGDNSVDHTLSPKTENNEITPNNKPNGETEKTSPIKSARSLPLRLNNIYVKKHKKILQIKNAKTLTPSTNTEADPLPSSSKVPENFTINKKNESDEEKNGLLQTISIEKIKENNDHNFDANIEEQPMDIEPGAPSSLSCDQYTSNSDLVKVKEEVNISNEFSNESVRSGQDIAPMETLRPINVITYGNMAVDDFDDDSNHRELLELEAASKSKQFVTMMNENYFGDNIYADYFTPDRVETFDAEKESGFGKDASKDTMYIWGEPSQKEAEFVLPNFIHESYKIAESGVDYSDMATVDVQMEGEGDKCERDTKAELLCESRSEEEPILNICTDETMPPRGELSGQESNGDLESPWSGIQIYSEVPPAETYDLIARESWVSDGSDVDANEKPDTLEEELHFPKRMFTCAQCGIKFPTMKELRAHKSLTHALPTCSSTKTTYSRMVTSRTIKKEEKPDTSVLAGSILQIDSKETISSTILQVYNVMSETKSQIAGLIKQETKRRRKDFVCPTCKEDQLTDAQFHAHLKIHPLECLTCGKCFFRRANLALHIKTHLGIKNYKCDICEKRFITRQKLNDHHNIHTGRAPIKCTVCNDTFRRYSNMVQHRDRHHFKKKAKVRDFVCHCGVVFHSKAKLLWHKETHEERPKACQYCSDKFVHAASLTRHVRRSHNEYYLSEQRAGKAENVPCHICKQVYLRTNLRAHLQTHTGERPYNCVICNKYFTTKWNLKLHRWTHMNRSAKPYKCNLCKGAFIRHTEYVSHMNAHKSVRPYTCKYCGCQFIRKYNCQRHVREHEMAKKYVCKVAECGKTFHRSYYLSEHMKVHSGVRPFSCNICGKTSSNKSNHNKHVKIHHAREPVAAEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00257253;
- 90% Identity
- -
- 80% Identity
- -