Basic Information

Insect: Apodemia mormo
Gene Symbol: -
Assembly: GCA_036924255.1
Location: JAUPFN010000040.1:717610-723775[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0012 0.17 13.8 1.6 2 23 1312 1333 1311 1333 0.97

2 8 4e-05 0.0056 18.4 3.1 1 23 1339 1361 1339 1361 0.98

3 8 0.0053 0.73 11.8 4.0 1 23 1367 1389 1367 1389 0.97

4 8 1.7e-06 0.00024 22.8 1.8 1 23 1395 1417 1395 1417 0.97

5 8 2.8e-05 0.0039 18.9 6.0 1 23 1423 1445 1423 1445 0.97

6 8 2.7e-05 0.0037 19.0 2.5 1 23 1451 1473 1451 1473 0.98

7 8 0.00063 0.087 14.7 1.0 1 23 1479 1501 1479 1501 0.95

8 8 2.5e-05 0.0035 19.1 0.8 1 19 1507 1525 1507 1527 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0012	0.17	13.8	1.6	2	23	1312	1333	1311	1333	0.97
2	8	4e-05	0.0056	18.4	3.1	1	23	1339	1361	1339	1361	0.98
3	8	0.0053	0.73	11.8	4.0	1	23	1367	1389	1367	1389	0.97
4	8	1.7e-06	0.00024	22.8	1.8	1	23	1395	1417	1395	1417	0.97
5	8	2.8e-05	0.0039	18.9	6.0	1	23	1423	1445	1423	1445	0.97
6	8	2.7e-05	0.0037	19.0	2.5	1	23	1451	1473	1451	1473	0.98
7	8	0.00063	0.087	14.7	1.0	1	23	1479	1501	1479	1501	0.95
8	8	2.5e-05	0.0035	19.1	0.8	1	19	1507	1525	1507	1527	0.96

Sequence Information

Coding Sequence: atGCCTTGTCAAGCTGAACCGACAACGATGTTTCCATTGGATGTTATGGTTAAATTAGAACCAATAGAAGAAGACTTTGGAATTCAAGAGGAAATTATAGATGACTCAATAGATGTGAAATTAGAGATAGAGACATTGTATGCAGATAGATCGCTGAACTTAAGTGAAGTGGAGTTCGATGAAGTGTACAAGTCTTACATTGCATCCTCAAAATATCCAATAATTCAGCTCACTAAATtggaaatatctaaaataacaACTGATAAATGTGGCCTGAATTCTCAAAAAGATTTAGAGCTATCATTCAATGATTTGTCTATTATAAGAAGTGAAACATGTGATTCATATCCAAAGGAAGATGAAGAATCCGTAACATCATCAAATGATACCTCTAACAATGCATCTAAAGAATTACCTAcagtaataaatgaaaattatttttctactaCAGAAAATGAAGCAGAAAATATCACATTTGATACGTCCACAAAAGTATCTAAAACACCACCCAAAGTaatgaaagaaaattttatcCCAAGTCCTGAACAAGAAGTAGAAAGCATCCCATCTTCTGATAACACGTCTGCAATAGTAATCAAAGATAATTTTGTACCCAATCAAGAAAAATATGTAGAAAGCCTGCCAACATCTGATGACATGTCTACAAAGCAAATAGcacctgaaataaataaagacAATTTTGTCCCCAATGTAGAAAACGAAGTAAAAAGCATACCATCTTCTGACAACATATCTACGACAACAGATGTTATAGATATAGCATCTAAAAAATTATCCAACATAAGGAAATTTAATTCAAACTCCAATGCAGAAAAAGAAGTGGAAAGCATTCCATCTTCTGATGATATGTCTACCAACGCATCTAAAACAACTGAGAGGATTCAAGACAATTTTGTTTCACATGCAGAAAAGGAAGTAGAAAATATCTCAACACCTTATGACATTTCTGCTAACGCATCTGTatcacttaaaataattaaatataattttgccCCCAATGTAGGAAAAGAAGTAGAAAGCATACCATTTTCTGATAACATGTCTTCAAAAATATCTCTAGCATCTAAAAAATcacctgaaataaataattataatttagaatcCAATGCAGAAAAAGAAGAAACCATTCCATCTTCTGATGACATGTCTACAAACGCATCTATAACATctaaaataattgaatataattttgCCCCACATGCAGAAAAAGAAGTAGAAAGTATTCCTTCATCTGTTGACATTTCTACAAACGCATCTCTATcacataaaaaaacaactaaAGTAATCAAAGATAATTTTGCCCCCAATGTAGAAAAACAAGTTGGAAGCATACCATCTTCTGATAATATATCTTCAAAAATATCTATAGTCTCTAAAAAATCAcccaaaaaaagaaaattaaatttggatGCCAATGAAGAAAGAGAAGTGGAAAGCATTCCATCTAATGACGACATATCTACTAAAACATCTGTTGCATTTAAGAAACCAcccaaaataagaaaattaaatgtaGACTCGAATGCAGAAAAAGAAGTAGAAAGCATTCCATCTTCTGATAATATGACTGAAAAAGCGTTTAAAGCATCTAAAAAAACAGCTAAAATAACGAAAGATAGTTTTGCCCTTAATGCCGAAAAAGAAGTAGAAAGCGTCACATCTTCTGTAACATCTAAAAAACAAGTcaaaataactaaatatattttgaccTCCAAAGCAGAAAAATCGTCTGGTGACACATCTACAAACACATCTATAGCACTTAAAAAACCACCTAAAGTAATTAAAGACAATTTTTTCATCAATTCAGATAAACAAGTAAAAAGCATCTCATCTTCCAATACCGTGTCTAAAAAAGCGTCAGTAgcaattataaaatcagctaaAATAACGAAACATCATTTTACCTCCAATGCAGATAAACCGGAAAAAAGTGCTACATCATCTAGTAACATATCAACAAGCGCATCAATAGCACCTGAAAAACCACCTACAATAATTAAAGATAATTCCACCCTTAATTCACAAAAAGAAGTAGAAGGCATCTCATCCTCTGATACCATATCTAAAAAAGCTTCTGtggcaaataaaaaatcagATAAAATAACGAAACAGAATTTTATCTCCTATGCAAATAAAGAGGGAAAAAGAGCCCCACCAACTGCTGATACATCTACAAGCGCATCAGTAGCACCTAAGAAACCACCTAAATTAACTAAAGATAATTTTGCCCTCAATTCAGATAAAGAAGTAAAAGGTATCTCATCCTCTGGTAACATATCTAAAAAAGCGTCTGtggcaaataaaaaatcagcTAAAACAACGAAACATCAATTTTCCTCCAATGCAGAGAAAGCGGAAAAAAGCGCTTCATCATCTAGTGACATATCTATAAGCGCATCAATAGCAGCTGAACAACCAcctaaaataattaaagataatTCCGCCCTTAATGCAGAAAAAGAAGTAGAAGGCATCTCATCTTCTGGTACCACATCTAAAAAAGCATCTGtggcaaataaaaaatcagATAAAGAGGGAAAAAGAGCCCCACCAactggtgatatatctataagcGCATCAATAGCACCTAAGAAACCACCTAAATTAAAAGATAATTTTGCCCTCAATTCAGAAAAAGAAGTAAAAGGTATCTCATATTCTGGCACCATATCTAAAAAAGCGTCTGtggcaaataaaaaatcagcTAAAACGAAGGAACATCAATTTTCCTTCAATGCAGATAAAGAGAGAAAAAGCACTCCATCATCTGGTGACATATCTAAAAATACATCTTTAGCACCTAAAACACCACctaaattaattaaagataatgccACCCTTAATACAGAAAAAGAGGAAGAAAGTGTCTCATCCTCTGGTACCATATCTAAAAAAGTCTCTGGGGCAAATAAAATAGCTAATATAACGAAACGTCACTTTACCTCCAATGCAGATAAAGAGAGAAAAAGCACTCCATCATCTGGTGACATATCTAAAAATACATCTATAACACCTAAGAAACCACCTCaattaaataaagataattcCGCCCTTAATGCAAAAAAAGAAGTAGAAAGAATCTCATCTTCTGGTACCATGTCTGAAAAAGCATCTGTGGCAAATAAAACATTGGCTAAAATaacgaaatataattttacctCCAACGAAGATAAAGAAGGAAAAAGAGCACCATCATCTGGTGACATAACTAAAAATGCATCGATACCACGTACAAAatcacacaaatataattttgacTCCAATGCAGAAAAAGAAATGGAGAGCATCCCATCTTCTGATAACATCTCTACAAAAACATCTGTAGGGTCTACAAAACCACccaaaattagaaaatataatgaagaCTTCAAAGCAGAAAAAGAATCTTCTGATAACatgattaaaaaagtatctacagaacataaaaaatcatcaaaaataagtaaaaagaaTTTTGCCACCAATGCAAGAGAAGAAGTAGAAAGTGTCCAATCATTTGTTAACTTATCTACAAAAGCACCTGTAGAATTATCAGTAGTTAATGAGAATCGTTCCTCTAATACAGATAAAagcaaagaaaagaaaatacaattaTCTAAATCTAAAGAATTATCTAAAATAACGAAAGAGAAATCCTCTTCTAATACTAAACAAGACAAAGAAAATGTAAGGCTGTCTAGTAATATATCTGCAAAACTTAAAGAATTATCTAAAACAACAAATGGCAAATACACCAATACTGAAaaagaaattgaaaaaatactattattgaGTGAATCTAAAAGTGCATCTAAAGAAATATCTTCAACAAATGGGAAAATTGTCAGTACTCATGAAAAAAACGCACAATCTGGGGAGGTTAAAATATCtactgtgaaaaataaaaaacatgttgatgttataaaaaaaatgtgtcatATCTGTGGTCAAGGGTTCAGTAGAACGCTTTACTTAGATCAGCATTTACAAACTCACTCCGGAGAGAAACCTTTCTCTTGTGATACATGCGGAAAATCATTCCGCAGTAAGTTCTATTTAAGTGATCACTTCAATACTCATACCGGAAGCAGACCTCATAAATGTGATATGTGCAGTAAAAGATTTAATAGCATTACAACAATGCGAAGACATCGATTAATTCATACCGGGGAAAAGCCTTATTCTTGTGATGTGTGTGGGAAATCCTTTTCACAACACAGTAACTTAGTAACTCATAAAAGTATACATAATTCCATTAGGAATTTTGAGTGTAACATATGTAAAAAGGTTTTTAAACGATTGCATCATTTGCAAAGACATAACATGAGCCATACCAAAGAGAAACCGTTCCGTTGTGATATTTGTAAAAGTGGTTTTATTACTCGATCTCATTTGAAGACGCACATGAATATACATACTGGGAATAAACCGTTTAAATGTAGTTATTGCGATAAACGCTTCATTACTGGTACTACTATGCGTCGACATGCAGTTGTACACACAAACGAAAAGCTTTACTCTTGTGAAGTCTGCGGAAAGGCATTCAATTTTAAGGCAAATTTGAAAAGGCACAAATTTTTAGTATGTGAAAAGGGACgctga
Protein Sequence: MPCQAEPTTMFPLDVMVKLEPIEEDFGIQEEIIDDSIDVKLEIETLYADRSLNLSEVEFDEVYKSYIASSKYPIIQLTKLEISKITTDKCGLNSQKDLELSFNDLSIIRSETCDSYPKEDEESVTSSNDTSNNASKELPTVINENYFSTTENEAENITFDTSTKVSKTPPKVMKENFIPSPEQEVESIPSSDNTSAIVIKDNFVPNQEKYVESLPTSDDMSTKQIAPEINKDNFVPNVENEVKSIPSSDNISTTTDVIDIASKKLSNIRKFNSNSNAEKEVESIPSSDDMSTNASKTTERIQDNFVSHAEKEVENISTPYDISANASVSLKIIKYNFAPNVGKEVESIPFSDNMSSKISLASKKSPEINNYNLESNAEKEETIPSSDDMSTNASITSKIIEYNFAPHAEKEVESIPSSVDISTNASLSHKKTTKVIKDNFAPNVEKQVGSIPSSDNISSKISIVSKKSPKKRKLNLDANEEREVESIPSNDDISTKTSVAFKKPPKIRKLNVDSNAEKEVESIPSSDNMTEKAFKASKKTAKITKDSFALNAEKEVESVTSSVTSKKQVKITKYILTSKAEKSSGDTSTNTSIALKKPPKVIKDNFFINSDKQVKSISSSNTVSKKASVAIIKSAKITKHHFTSNADKPEKSATSSSNISTSASIAPEKPPTIIKDNSTLNSQKEVEGISSSDTISKKASVANKKSDKITKQNFISYANKEGKRAPPTADTSTSASVAPKKPPKLTKDNFALNSDKEVKGISSSGNISKKASVANKKSAKTTKHQFSSNAEKAEKSASSSSDISISASIAAEQPPKIIKDNSALNAEKEVEGISSSGTTSKKASVANKKSDKEGKRAPPTGDISISASIAPKKPPKLKDNFALNSEKEVKGISYSGTISKKASVANKKSAKTKEHQFSFNADKERKSTPSSGDISKNTSLAPKTPPKLIKDNATLNTEKEEESVSSSGTISKKVSGANKIANITKRHFTSNADKERKSTPSSGDISKNTSITPKKPPQLNKDNSALNAKKEVERISSSGTMSEKASVANKTLAKITKYNFTSNEDKEGKRAPSSGDITKNASIPRTKSHKYNFDSNAEKEMESIPSSDNISTKTSVGSTKPPKIRKYNEDFKAEKESSDNMIKKVSTEHKKSSKISKKNFATNAREEVESVQSFVNLSTKAPVELSVVNENRSSNTDKSKEKKIQLSKSKELSKITKEKSSSNTKQDKENVRLSSNISAKLKELSKTTNGKYTNTEKEIEKILLLSESKSASKEISSTNGKIVSTHEKNAQSGEVKISTVKNKKHVDVIKKMCHICGQGFSRTLYLDQHLQTHSGEKPFSCDTCGKSFRSKFYLSDHFNTHTGSRPHKCDMCSKRFNSITTMRRHRLIHTGEKPYSCDVCGKSFSQHSNLVTHKSIHNSIRNFECNICKKVFKRLHHLQRHNMSHTKEKPFRCDICKSGFITRSHLKTHMNIHTGNKPFKCSYCDKRFITGTTMRRHAVVHTNEKLYSCEVCGKAFNFKANLKRHKFLVCEKGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00144940;
90% Identity: iTF_00144940;
80% Identity: -