Basic Information

Insect: Apodemia mormo
Gene Symbol: -
Assembly: GCA_036924255.1
Location: JAUPFN010000028.1:320569-326545[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0012 0.17 13.8 1.6 2 23 1288 1309 1287 1309 0.97

2 8 4e-05 0.0055 18.5 3.1 1 23 1315 1337 1315 1337 0.98

3 8 0.0052 0.72 11.8 4.0 1 23 1343 1365 1343 1365 0.97

4 8 1.7e-06 0.00023 22.8 1.8 1 23 1371 1393 1371 1393 0.97

5 8 2.8e-05 0.0038 19.0 6.0 1 23 1399 1421 1399 1421 0.97

6 8 2.6e-05 0.0036 19.0 2.5 1 23 1427 1449 1427 1449 0.98

7 8 0.00062 0.085 14.7 1.0 1 23 1455 1477 1455 1477 0.95

8 8 2.5e-05 0.0035 19.1 0.8 1 19 1483 1501 1483 1503 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0012	0.17	13.8	1.6	2	23	1288	1309	1287	1309	0.97
2	8	4e-05	0.0055	18.5	3.1	1	23	1315	1337	1315	1337	0.98
3	8	0.0052	0.72	11.8	4.0	1	23	1343	1365	1343	1365	0.97
4	8	1.7e-06	0.00023	22.8	1.8	1	23	1371	1393	1371	1393	0.97
5	8	2.8e-05	0.0038	19.0	6.0	1	23	1399	1421	1399	1421	0.97
6	8	2.6e-05	0.0036	19.0	2.5	1	23	1427	1449	1427	1449	0.98
7	8	0.00062	0.085	14.7	1.0	1	23	1455	1477	1455	1477	0.95
8	8	2.5e-05	0.0035	19.1	0.8	1	19	1483	1501	1483	1503	0.96

Sequence Information

Coding Sequence: ATGCCTTGTCAAGCTGAACCGACAGCGATGTTTCCATTGGATGTTATGGTTAAACTAGAACCAATAGAAGAAGACTTTGGAATTCAAGAGGAAATTATAGATGACTCAATAGATGTGAAATTAGAGATAGAGACATTGTTTACAGATAGATCGCTGAACTTAAGTGAAGTGGAGTTCGATGAAGTGTACAAGTCTTACATTGCATCCTCAAAATATCCAATAATTCAGCTCACTAAATtggaaatatctaaaataacaACTGATAAATGTGGCCTGAATTCTCAAAAAGATTTAGAGCTATCATTCAATGATTTGTCTATTATAAGAAGTGAAACATCTGATTTATATGCAAAGGAAGATGAAGAATCAGTAACATCATCAAATGATACCTCTAACAATGCATCTAAAGAATTACCTAcagtaataaatgaaaattatttttctactaCAGAAAATGAAGCAGAAAATATCACAGGTGATACGTCCacaaaaatatctaaaacacCATCCAAAGTAATGATAGAAAATTTTATCCCAAGTCCTGAACAAGAAGTAGAAAGCATCCCATCTTCTGATAACACGTCTGCAATAGTAATCAAAGATAATTTTGTACCCAATCAAGAAAAATATGTAGAAAGCCTGCCAACATCTGATGACATGTCTACAAAGCAAATAGcacctgaaataaataaagacAATTTTGTCCCCAATGTAGAAAACGAAGTAAAAAGCATACCATCTTCTGACAACATGTCTACGACAACAGATGTTATAGATATAGCATCTAAAAATTTATCCAACATaaggaaatttaatttaaactccAATGCAGAAAAAGAAGTGGAAAGCATTCAATCTTCTGATGATATGTCTACCAACGCATCTAAAACAACTGAGAGAATTCTAGACAATTTTGTTTCACATGCAGAAAAGGAAGTAGAAAATATCTCAACACCTTATGACATTTCTGCTAACGCATCTGTatcacttaaaataattaaatataattttgccCCCAATGTAGGAAAAGAAGTAGAAAGCATACCATTTTCTGATAACATGTCTTCAAAAATATCTCTAGCATCTAAAAAATCACCTGAAATAAAGAATTATAATTTAGAATCCAATGCAGAAAAAGAAGAAACCATTCCATCTTCTGATGACATGTCTACAAACGCATCTCTATCACATAAAAAAACAGCTAAAATAATCAAAGATAATTTTGCCCCCAATGTAGAAAAACAAGTAGGAAGTATACCATCTTCTGATAATATATCTTCAAAAATATCTATAGTCTCTAAAAAATCAcccaaaaaaagaaaattaaatttggatGCCAATGCAGAAAGAGAAGTGGAAAGCATTCCATCTAGTGACGACATATCTACTAAAACATCTGTTGCATTTAAGAAACCAcccaaaataagaaaattaaatgtaGACTCGAATGCAGAAAAAGAAGTAGAAAGCATTCCATCTTCTGATAATATGACTGAAAAAGCGTTTAAAGCATCTAAAAAAACGGCTAAAATAACGAAAGACAGTTTTGCCCTTAATGCCGAAAAAGAAGTAGAAAGCCTCACATCTTCTGGAAACATGTCTAAAAAAGCGTCTGTAACATCTAAAAAACAAGTcaaaataactaaatatattttgaccTCCAAAGCAGAAAAATCATCTGGTGACACATCTACAAACACATCTAtagcacttaaaaaatcacctaAGGTAATTAAAGACAATTTTGGCATCAATTCAGATAAACAAGTAAAAAGCATCTCATCTTCCAATACCGTGTCTAAAAAAGCGTCAGTAgcaattataaaatcagctaaAATAACGAAACATAATTTTACCTCCAATGCAGATAAGCTGGAAAAAAGTGCTTCATCATCTAGTAACATATCAACAAGCGCATCAATAGCACCTGAAAAACCACCTACAATAATTAAAGATAATTCCACCCTTAATTCACAAAAAGAAGTAGAAGGCATCTCATCCTCTGATACCATATCTAAAAAAGCTTCTGtggcaaataaaaaatcagATAAAATAACGAAACAGAATTTTATCTCCTATGCAAATAAAGAGGGAAAAAGAGCCCCACCAACTGGTGATACATCTACAAGCGCATCAGTAGCACCTAAGAAACCACCTAAATTAACTAAAGATAATTTTGCCCTCAATTCAGATAAAGAAGTAAAAGGTATCTCATCCTCTGGTAACATATCTAAAAAAGCGTCTTTGCCAATTAAAAAATCAGCTAAAACAACGAAACATCAATTTTCCTCCAATGCAGAGAAAGCGGAAAAAAGCGCTTCATCATCTAGTGACATATCTATAAGCGCATCAATAGCAGCTGAGCAACTAcctaaaataattaaagataatTCCGCCCTTAATGCAGAAAAAGAAGTAGAAGACATCTCATCTTCTGGTACCACATCTAAAAAAGCGTCTGtggcaaataaaaaatcagATAAAGAGGAAAAAAGAGCCCCACCAACTGgtgatatatctacaagcgcaTCAATAGCACCTAAGAAACCACCTAAATTAAAAGATAATTTTGCCCTCAATTCAGAAAAAGAAGTAAAAGGTATCTCATATTCTGGCACCATATCTAAAAAAGCGTCTGtggcaaataaaaaatcagcTAAAACGAAGGAACATCAATTTTCCTTCAATGCAGATAAAGAGAGAAAAAGCACTCCATCATCTGGTGACATATCTAAAAATACATCTTTAGCACCTAAAACACCACctaaattaattaaagataatgccGCCCTTAATGCAGAAAAAGAAGAAGATAGTGTCTCATCTTCTGGTACCATATCTAAAAAAGTCTCTGGGGCAAATAAAATAGCTAAAATAACGAAACATCACTTTACCTCCAATGCAGATAAAGAGAGAAAAAGCACTCCATCATCTGgtgacatatttaaaaatacgtcTATAACACCTAAGAAACCACCTCaattaaataaagataattcCGCCCTTAATGCAGAAAAAGAAGTAGAAAGAATCTCAGCTTCTGGTACCATGTCTAAAAAAGCATCTGTGGCAAATAAAACATTGGCTAAAATaacgaaatataattttacctCCAACGAAGATAAAGAGGGAAAAAGAGCACCATCATCTGGTGACATAACTAAAAATGCATCGATACCACGTACAATatcacacaaatataattttgacTCCAATGCAGAAAAAGAAATGGAAAGCATCCCATCTTCTGATAACATCTCTACAAAAACATCTGTAGAGTCTACAAAACCACccaaaattagaaaatataatgaagaCTCCAAAGCAGAAAAAGAATCTTCTGATaacatgattaaaaaaatatctacaggACATAAGAAATCatctaaaataactaaaaataattttgccacCAATGCAAGAGAAGAAGTAGAAAGTGTCCAATCATTTGTTAACTTATCTACAAAAGCACCTGTAGAATTATTAGTAGCTAATGAGAATCGTTCTTCTAATACAGATAAAagcaaagaaaagaaaatacaattaTCTAAATCTAAAGAATTATCTAAAATAACGAAAGAGAAATCCTCTTCTAATACTAAACAAGACAAAGAAAATGTAAGGCTGTCTAGTAATATATCTGCAAAACTTAAAGAATTATCTAAAACAACAAATGGCAAATACACCAATACTGAAaaagaaattgaaaaaatactattattgaGTGAATCTAAAAGTGCATCTAAAGAAATATCTCCAACAAATGGGAAAATTGTCAGTACTCATGAAAAAAACGCACAATCTGGGGAGGTTAAAATATCtactgtgaaaaataaaaaacatgttgatgttataaaaaaaatgtgtcatATCTGTGGTCAAGGGTTCAGTAGAACGCTTTACTTAGATCAGCATTTACAAACTCACTCCGGAGAGAAACCTTTCTCTTGTGATACATGTGGAAAATCATTCCGCAGTAAGTTCTATTTAAGTGATCACTTCAATACTCATACCGGAAGCAGACCTCATAAATGTGATATGTGCAGTAAAAGATTTAATAGCATTACAACAATGCGAAGACATCGATTAATTCATACCGGGGAAAAGCCTTATTCTTGTGATGTGTGTGGGAAATCCTTTTCACAACACAGTAACTTAGTAACTCATAAAAGTATACATAATTCCATTAGGAATTTTGAGTGTAACATATGTAAAAAGGTTTTTAAACGATTGCATCATTTGCAAAGACATAACATGAGCCATACCAAAGAGAAACCGTTCCGTTGTGATATTTGTAAAAGTGGTTTTATTACTCGATCTCATTTGAAGACGCACATGAATATACATACTGGGAATAAACCGTTTAAATGTAGTTATTGCGATAAACGCTTCATTACTGGTACTACTATGCGTCGACATGCAGTTGTACACACAAACGAGAAGCCTTACTCTTGTGAAGTCTGCGGAAAGGCATTCAATTTTAAGGCAAATTTGAAAAGGCACAAATTTTTAGTATGTGAAAAGGGACgctga
Protein Sequence: MPCQAEPTAMFPLDVMVKLEPIEEDFGIQEEIIDDSIDVKLEIETLFTDRSLNLSEVEFDEVYKSYIASSKYPIIQLTKLEISKITTDKCGLNSQKDLELSFNDLSIIRSETSDLYAKEDEESVTSSNDTSNNASKELPTVINENYFSTTENEAENITGDTSTKISKTPSKVMIENFIPSPEQEVESIPSSDNTSAIVIKDNFVPNQEKYVESLPTSDDMSTKQIAPEINKDNFVPNVENEVKSIPSSDNMSTTTDVIDIASKNLSNIRKFNLNSNAEKEVESIQSSDDMSTNASKTTERILDNFVSHAEKEVENISTPYDISANASVSLKIIKYNFAPNVGKEVESIPFSDNMSSKISLASKKSPEIKNYNLESNAEKEETIPSSDDMSTNASLSHKKTAKIIKDNFAPNVEKQVGSIPSSDNISSKISIVSKKSPKKRKLNLDANAEREVESIPSSDDISTKTSVAFKKPPKIRKLNVDSNAEKEVESIPSSDNMTEKAFKASKKTAKITKDSFALNAEKEVESLTSSGNMSKKASVTSKKQVKITKYILTSKAEKSSGDTSTNTSIALKKSPKVIKDNFGINSDKQVKSISSSNTVSKKASVAIIKSAKITKHNFTSNADKLEKSASSSSNISTSASIAPEKPPTIIKDNSTLNSQKEVEGISSSDTISKKASVANKKSDKITKQNFISYANKEGKRAPPTGDTSTSASVAPKKPPKLTKDNFALNSDKEVKGISSSGNISKKASLPIKKSAKTTKHQFSSNAEKAEKSASSSSDISISASIAAEQLPKIIKDNSALNAEKEVEDISSSGTTSKKASVANKKSDKEEKRAPPTGDISTSASIAPKKPPKLKDNFALNSEKEVKGISYSGTISKKASVANKKSAKTKEHQFSFNADKERKSTPSSGDISKNTSLAPKTPPKLIKDNAALNAEKEEDSVSSSGTISKKVSGANKIAKITKHHFTSNADKERKSTPSSGDIFKNTSITPKKPPQLNKDNSALNAEKEVERISASGTMSKKASVANKTLAKITKYNFTSNEDKEGKRAPSSGDITKNASIPRTISHKYNFDSNAEKEMESIPSSDNISTKTSVESTKPPKIRKYNEDSKAEKESSDNMIKKISTGHKKSSKITKNNFATNAREEVESVQSFVNLSTKAPVELLVANENRSSNTDKSKEKKIQLSKSKELSKITKEKSSSNTKQDKENVRLSSNISAKLKELSKTTNGKYTNTEKEIEKILLLSESKSASKEISPTNGKIVSTHEKNAQSGEVKISTVKNKKHVDVIKKMCHICGQGFSRTLYLDQHLQTHSGEKPFSCDTCGKSFRSKFYLSDHFNTHTGSRPHKCDMCSKRFNSITTMRRHRLIHTGEKPYSCDVCGKSFSQHSNLVTHKSIHNSIRNFECNICKKVFKRLHHLQRHNMSHTKEKPFRCDICKSGFITRSHLKTHMNIHTGNKPFKCSYCDKRFITGTTMRRHAVVHTNEKPYSCEVCGKAFNFKANLKRHKFLVCEKGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00144942;
90% Identity: iTF_00144942;
80% Identity: -