Basic Information

Insect: Apodemia mormo
Gene Symbol: lrrfip2
Assembly: GCA_036924255.1
Location: JAUPFN010000005.1:4810518-4841251[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.5e-75 7.1e-71 240.4 24.5 1 269 156 429 156 454 0.87

2 2 1 4.9e+04 -7.4 9.5 134 160 487 513 450 523 0.46

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.5e-75	7.1e-71	240.4	24.5	1	269	156	429	156	454	0.87
2	2	1	4.9e+04	-7.4	9.5	134	160	487	513	450	523	0.46

Sequence Information

Coding Sequence: ATGGGCAATCGTGCAGAACAAGCCACACCTGAAAACAGTGATGAAGAGAGCGGTGACGCATTCACTGACGGGGATTTTGGTGATTCAGATGATGAAACTATCATTGAACGAAGTGCGGAAAAATCTTTACCGATCAATGAAACGATAAATACAGAAATAATTGAGGAAAAGAGGCAAAATGGCGTAGAGAAAATGAATGGACATTCAGAAGTTGATAATATAAACGGTGGAGCTGAATTAACACCTGAGATAAATGGTTTCGGCGAGAACGGCCTGTTGGATTTGCGGAGAGATTCGCACAGTGACAGCGGCTCTATAGTTGGAATACTGGGGGACCAGCATAACCATGTGGATTCACTTGTGCGTGAAGTGTGTTGTGGTTTGAGTCATGCGATGACCGCGCCATTGGACATGTCATCACCAGACCTATTTGTACGGATTGTGGCTAGACTGTTACTATTATATGCGGAACAACGGCTCGCTGCGCGGCGAGCGGCTCGGGCGGAGGCTCGGGAGATTCGCATGCGAGAATTGGAACGCCAGCAACGGGAACAAGAGGACCATGCAGACAAGGCATATGACATGTACACGGAAACCGTGGGCCGACGAGCTGGCAGTCGGTTAGCGGGATTAAGCCCCGGCTCTCTGCACTCACCGCGACGGAGTTCAGAAGATTCAGATGACGTACTCAGTATGAAGGACCTTAGGCACGAGTTAAAAGAAGTAGAAGAGAAATTCAGAAAGGCGATGATACTAAATGCTCAGCTGGACAACGATAAGGCAGCGCTCGGGTACCAACTGGAATTACTAAAAGATCGGATAGAAGAATTACAGGAAGAATATGCACAATTACAGAGAGAACATAAAGAGAAATGCTCAAGTCACGAGCGGCTCAAACGTGAGCATGCGACACTGGAGAGGGAGGTGACGCAGGCGAGAGACGCGATCCGCGCTCGGGACTCGGGCGCAGCGGCCGCGGGGTTCGTGTTCGTGGAGGCGGCGAGCGTGAGCGCGAGCGCGAACGAGGGGGACGCGGCTGTCACGGGCGAAGGGCAGCCTCAGGGCTTCGGCAGCGTGCCGCCGCTCGCGCTCGTGTCGCACCACACCGAACAGATGCTCGCCAACGCCGACGCCGGAGAGGGCTCGCTGGATGTCCGGTTGCAAAATCTGGTAACCTCAAAACAAGCGCTGGAATCAGAAGTGCGGAAATTGAAGCTGCAGTTGAACGAGGAGCGGGCGGCGAGGCAGAACGGTGTCGCCTCGCAACACGACCGGGATCTCGACAATGAACTGGAGAGCCTGCGCAAGGCGGTGTCGGAGGCGAAGGGTCGCGCGGCGCGCGGCGAGGCGGAGGCGGCGCTGCAGGCGGCGGCCGTGGCGCGGCTGGAGGCGCAGGTCGCGCGCCTGCGCGCCGCCGCCGACGCCGGCGACGAGCGGGAGGAGGCGCTCAAGGGGGACAAGCGCCGCCTGCAGCGGGAGGCGAGAGAAGCCCTCAACCGAGTAGAAGAGTTAGAGACAGAAAACAGCCATCTCACCAAGCGGTTAGACAAACTCAAGAATGCGAAGTCAGCGCTTCTTAAAGACCTGTGA
Protein Sequence: MGNRAEQATPENSDEESGDAFTDGDFGDSDDETIIERSAEKSLPINETINTEIIEEKRQNGVEKMNGHSEVDNINGGAELTPEINGFGENGLLDLRRDSHSDSGSIVGILGDQHNHVDSLVREVCCGLSHAMTAPLDMSSPDLFVRIVARLLLLYAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYTETVGRRAGSRLAGLSPGSLHSPRRSSEDSDDVLSMKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSSHERLKREHATLEREVTQARDAIRARDSGAAAAGFVFVEAASVSASANEGDAAVTGEGQPQGFGSVPPLALVSHHTEQMLANADAGEGSLDVRLQNLVTSKQALESEVRKLKLQLNEERAARQNGVASQHDRDLDNELESLRKAVSEAKGRAARGEAEAALQAAAVARLEAQVARLRAAADAGDEREEALKGDKRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -