Abak014764.1
Basic Information
- Insect
- Apocrypta bakeri
- Gene Symbol
- dmd-4
- Assembly
- GCA_018906985.1
- Location
- JACCIA010000005.1:6230847-6237235[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-26 3.8e-22 77.7 10.8 1 47 24 70 24 70 0.99 2 2 1.5 7.5e+03 -3.3 0.3 3 8 357 362 356 364 0.74
Sequence Information
- Coding Sequence
- ATGCTGCGAGGGAAATCGAAGAAATCGGAAGAGGACGAGGAGTCGTCCGGAAACACCGAGCCGAGACAAAGGAGACCGAAATGCGCGAGATGCAGAAATCATGGACTGATATCGTGGCTCAGAGGACACAAACGCGAGTGTCGCTATCGCGAGTGCTTTTGCCCCAAGTGTTCTCTCATCGCTGAGAGACAGAGAGTCATGGCTGCGCAGGTGGCATTGAAAAGGCAACAGGCAGCGGAGGACGCGATAGCATTGAGTATGGCAAAAGTAACGACGGGACAAAAGCTGAATCGGCTTCCGCCGGGAAAGATTTTTGGGATGACAGTGACGGAACCGGATACAAGCGCTAAGCCGACAGTGGATCAGTCAAATCCGAGCAATATCAAAGCGATTTTCGGCGACACGAAAACCAACCCGTTGAGAGACGCGATCGAGAAGAATCAAGTGGTCGAGACGAACATTTCGTGGAAATCCGCAAAGTCGGAAGATCCAGAAAAATCCGATCATCAATGCCCATCTGTCGTTGCAACCGATTCGACCAGCAGCAAATCTCCAACAACAATATCCCAAGCATCGGTGGATACGCTTTCCCGATTATTCCCAGGCACAAAGCTCTCGGTATTGCAACTGGTCCTTCAGCGTTGTGGTCAGGATCTTCTCAAGGCCATCGAGTATTTCGCGAGTAATGGATCGACCGAAAGGGTCTCGGCTTTTCGTCCACCGGTTGCGCAACTGCAATCACCTTCGATGACGAGCTGTGATGAAAACTCAGAAATTCCATCGACGGTGCAGATCGATAGGTCCAGTGATTTGGGACTTGGATTACAACCGTCGGTTTATTCGACAAATTTACATGCTGATGGATCGCTGGGCTGCTGCTTTGTAAATGTTGTATCGGACTCTGTACCAAGAAGTCTAGAAGTATGCACTGCTGGTTTCCCTTTAAGTAAACCTACGACTTACGAACGCAGTTTTTTCGACACTGGACTTCCACAGCCTCAAGCTCAGTTACCTCAAAGGCCGATCTTTCATTTACCGTCGTTCATTCCAAGAATACCCTGTGTTCAACCAAATTGTTTATTGTGCTATAAGTTTACGTGA
- Protein Sequence
- MLRGKSKKSEEDEESSGNTEPRQRRPKCARCRNHGLISWLRGHKRECRYRECFCPKCSLIAERQRVMAAQVALKRQQAAEDAIALSMAKVTTGQKLNRLPPGKIFGMTVTEPDTSAKPTVDQSNPSNIKAIFGDTKTNPLRDAIEKNQVVETNISWKSAKSEDPEKSDHQCPSVVATDSTSSKSPTTISQASVDTLSRLFPGTKLSVLQLVLQRCGQDLLKAIEYFASNGSTERVSAFRPPVAQLQSPSMTSCDENSEIPSTVQIDRSSDLGLGLQPSVYSTNLHADGSLGCCFVNVVSDSVPRSLEVCTAGFPLSKPTTYERSFFDTGLPQPQAQLPQRPIFHLPSFIPRIPCVQPNCLLCYKFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01274497; iTF_01487045; iTF_01035440; iTF_01036228; iTF_00286356; iTF_00287253;
- 90% Identity
- -
- 80% Identity
- -