Abak012685.1
Basic Information
- Insect
- Apocrypta bakeri
- Gene Symbol
- dl
- Assembly
- GCA_018906985.1
- Location
- JACCIA010000009.1:619547-621286[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-54 2.6e-51 173.7 0.0 1 168 7 177 7 178 0.97 2 2 2.5 5.5e+03 -3.0 0.0 68 87 303 325 291 369 0.56
Sequence Information
- Coding Sequence
- ATGCTCCGCAAACCTTGTGTAAAAATTATCGAGCAGCCACGCAGTAGAGGGACAAGATTCCGTTACGATAGCGAAGGGAGAATCGCCGGAACAATTACAGGTGTCAATAGTACTAGAGAAAAAAAATCTTATCCTACAATCCAAATTATGAATCATAAAGGGCCAGCTTTTGTAGTAGTTTCTTGCGTTTCGAAAGATGAACCGTACAGGCCTCATCCATATAATATTAGCGTTAAAGTATCCGAGATGTCACAAGGAATATTTTATTATAAAGTACCTCCAAATGAATCGGTAATAACATTTCCCTATTTTGGTATCGAGTGTGTAAAAAAGAAGAATATAGTGAAATCTTTGGAAGAACGAGAACGTTTGCAGGTTGACCCATTTAAAACTGGGTTCGATCACAAATTATGGCCTGAGAAAATTGATTTGTCTTCTCTTCGACTATGTTTTCAAGTTTTTATAGAAGGGAAAGTTAGCGGCTTATTTAACGTCCCACTTGATCCCGTAGTTACCCTGCCAATTTACGACAGAAAAGCTACAGGTGACCTTAAAATTTGGTGGATTAGCGATTATTCGGCTCCTATCAGCGGCGGAAACACCGTTTGCTTACTGTGCGAGAAAATTATCAAAGATGACATTCAAGTTCGTTTTTATGATCGAAAGACAAATTGGGAAGCTACTGCAGAATTCACTCCTCCAGGACAGCACAAACAGGTGGCCCTTGTCTTTAAAACACCTAAATACAATAAGCAAGACGTAGATCAGCCAGTACAAGTGCATATTCAATTGAGACGACCGTCCGATGACGAGGTCAGCAATTCTATACCATTCGAATTCATTCCAGTGGAATGTGCTTCTGGAAATATGCTCCGAGCAAAGCGCCAAAAACTTCACGAATCTCCAAGGGATTTAGTTTTGAGACACCTGCAAGAAAAAGCTGAGCAACCTATTAATATGAATGTGAATGCCAATACTTTCCCTGTTGAAAATGCCGATTCGCTGGGATTGTGCAATCCTACTGTAGTAGATAAGCCTACACAACTTTCTTTCTACAACGAAATCAATATGAGACCTTCTTCGAATAGATTCACGGCACATGCTCACAATCACTTATATTACAATCATGAACCGATAGAAAATTTCAATCAGATGGCGCAAAATTTCACAATTAATAACTTCAATGCGATGGATGTGAATAATTCCAACAATAATTGCCCAAACTATGGTATGTGA
- Protein Sequence
- MLRKPCVKIIEQPRSRGTRFRYDSEGRIAGTITGVNSTREKKSYPTIQIMNHKGPAFVVVSCVSKDEPYRPHPYNISVKVSEMSQGIFYYKVPPNESVITFPYFGIECVKKKNIVKSLEERERLQVDPFKTGFDHKLWPEKIDLSSLRLCFQVFIEGKVSGLFNVPLDPVVTLPIYDRKATGDLKIWWISDYSAPISGGNTVCLLCEKIIKDDIQVRFYDRKTNWEATAEFTPPGQHKQVALVFKTPKYNKQDVDQPVQVHIQLRRPSDDEVSNSIPFEFIPVECASGNMLRAKRQKLHESPRDLVLRHLQEKAEQPINMNVNANTFPVENADSLGLCNPTVVDKPTQLSFYNEINMRPSSNRFTAHAHNHLYYNHEPIENFNQMAQNFTINNFNAMDVNNSNNNCPNYGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -