Abak012686.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apocrypta bakeri
Gene Symbol
dl
Assembly
GCA_018906985.1
Location
JACCIA010000009.1:622847-630124[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-74 7.5e-71 237.3 0.1 1 169 55 225 55 225 0.99
2 2 4.9 1.1e+04 -4.0 0.1 95 119 502 526 492 542 0.62

Sequence Information

Coding Sequence
ATGGAGCGCTTTTCCAGCATGAGCGATGGAAACATTAATATAAGCGATGTCCTGGACGCGATCGAGACGGCTGACCCGAGTTTTGGGAACCGAGGAGACATCGAGATGCCGCAGACGACGGGATGCAATCGTCTCGATTCAAGATCGAGGACTGGACCCACCGTTGAGATCGTCGAACAGCCAGCTAGCAAAGCTCTGAGATTCAGATACGAGTGCGAGGGCAGATCAGCTGGTAGTATACCCGGTGTCAACAGCACTCCGGAGAACAAGACTTTTCCCACTATCCGCATTATCGGATACAAGGGTCGTGCTATCGTCGTTGTGTCCTGTGTAACCAAAGACTTTCCATACCGACCGCACCCGCACAACCTCGTTGGCAAAGAGGTCTGCAGACGAGGCGTTTGCACGGTCGAAGTCCCCTGCGAAGCAATGACTGTCTCTTTCGATAAACTTGGAATACAGTGTGTCAAGAGGAAAGATATCGAGGAGGCTCTTAAGCTTAGGGAGGAGAATAGAGTCGATCCTTTTCGAACTGGCTTTGATCATAAACGCCAGCCAACGAGTATAGATCTCAATGCCGTGAGACTGTGTTTCCAAGTATTTGTCGAGGGACAGGAGAAAGGAAAATTCACAGTACCCTTGCAGCCTGTAGTTTCGGAACCGATTTATGACAAAAAGGCAATGTCCGATCTTGTGATATGCAAGCTCAGTCACTGCAGCGCTTCGGTGGCCGGTGGCACTGAAATGGTTCTACTCTGTGAAAAAGTCGCCAAAGAGGACATTGAAGTGAGATTCTTCGAAGAGCGGGATGGACGAACTTTCTGGGAAGGAAGAGGCGATTTTCAACCTACACACGTTCACAAACAGGTAGCAATATCTTTTCGGACCCCGAGCTACAAGACGCATCAGGTGGATCAACCAGTTCAAGCGCACATCCAGCTACGACGACCATCGGATGGTGCCGTGAGCGAGCCGCTGCCTTTTCAACTGCTGCCCTTGGGATTAGGTAGGAGCGAGCGTATCTGGTCGCTGCGCAAGTCCTTAGCCTTGACACATAGCATCCATAGCATTAATCGAAGCGCGAACGTTAACAGTAGGTTTAAGAAGGCCAGTGAACCAAGCGACTTGGCAGCGACCCTCAACCGCGTAATCGCGTACGAACAGCAGCTGGTGGCTTCGAGGCCACGGCTACTTGACGAGTTCAACAACAATTGCAATGAACAAAATACCGAGGAGGTCAAGCGCGCGCACAGTAAACTCTCGGCCCTCCGTGCGCTCAACGACATTTACAACGTTAAGAGCAACTCGAACAACTTCAGCAAGTTCGACGAGTTACCTGTAATAGACTCTGCGAAAGCGAACGAAATTCTGATCATCAACGACGATGACAAGACCATCGTTCCCGAGAGGAGTGTTACGATCGTTCCTGAAGTACAACAACAAAACGGTTCGTTTATCGGTGAGGATGGAGCCAAAGATAAAACTAACTGGTATGACTATAGCGAGATCGGAAAGTGGGTGGAGAAGAGCCAAGAGGTCGACGAGGAAATGAACGAGCAGCAGCAACAGCCCAATGAATTGGTCATGGACACGACCCAAAGCAACGGTGACAAGTCGTTGGATGAGCTACTCGACAAAATTTACGAGGATACTCATGCTAAATTAATTTATGAACAACAGTTGCTGCAGCAGCAATCGGCAGCTTTAGAAAAAAATGGATGCAGCGAAATGTTAGAGCCAGATGTACCGGACAACATGACTTATACCAGTATGCAGATGGCTATGAAGAATCCAGTCTGGGTAAGAGTTGTGCGCAGACCGCAGACTGAGAAAGAAGCCGCAGCTGCCGCCGCTGCTACTGCTTTAGCTACGCCGTTACCTGGTACAACCGTTTCTAGTCCAATCATAGCAATCGGCAGCAATAATTTACCAGCCGAAGATGCGCCACCTCCAAGACCTCCACCACCGGTAGCGCGCATCAAACGCGATGTGTCTTTGGGACCCGAAGGACCGTTGCCTCCTCTGCCTCCGAAGCGTATACGAAAAACTCCGTCCATGCCTGTCCTGCCTCAATCTTCTAGTCAAATTATCACCGATCAGCAAACTCAATCAACAGCTCCTCGAAAGAATTTACCAACTCCACCAAATTCGTACGGCAGTTTGCCAAAACAAAGCAAGCCAGGAATTTTTTCCAAGCTCTTTTCGAAGAAATCGAAAAAGGAAAACGTTGTAGCATCGACGTCCAGCCTACCTGGTTTGGTAAGAGCACCACTTACTGCCAGCGCTAAGAGTATGGAAGTAGGACTTGAGTTGCAGCTCGAATCCGGACAAGTGACACCGCCGTACGGTCCAGAATTAACCGAAGCTGAGCATTATGCCCTATATACGGCTATGGCGCCGAAAGCTACTGCATCAGAGTTTGATGAAATGTCGTTTTATTACAGTCCCGTTGAGGATGATCCCGATTCGTTACGGCGAAAGAGACAGAAATTCAATAACAGCCCGAATGCTTATGTATTGAGGCACGTGCAAGCCGAGGCTGAGAAACAATCGTGCCTGTTGAACCAAATGCCACAATTCAACTACAGTATCATTCAGCCTGTTAAAACTGAACCAGCGGATAGACTCTCACCTTTCGGAGCTCCTCAATCGGCAGCATCGCCGCCCACGTTCCAAGGGATGGGTTTGCGTCCAATCAGTTCTCCAAGGCGTACACCGTCTCCAATGATGGAATGTGCGATGTACAACATACCACCTACACAACAAAATTTGGGATCTCAATTGCAACCGATAATGATACAACAAGGTTCGCCTTCGCCGCTGTTAATGCAGGATCCAATGGTTGGAAATAACATAGCAACGGAACCGCCAAAAAGCAGTTTTGTACTCGGTGATTCAAGTATTATATCCGATGCGATAGGTAATGCAATAAACATTGCTAACGTTTTGGATGAGAATCAACAGCAGCCCGATTTCGTGGATATGAGCTTTTCACAATTCGACCACGTTGACTTGAATTCCCTGAATATTTCGGATATTGTCAAGGAGGCAGTAAACGGGACTGAGGTAACAGGTAATGCGATCGAAGAAACAGGAATGACCGACAGCTTTACCAAGTTAACGAGGAACGCCATGCAGGAGCTCTGCTCGTTAAACAGCATGTACAAGCCCACGACCGACGATGTGAATTAA
Protein Sequence
MERFSSMSDGNINISDVLDAIETADPSFGNRGDIEMPQTTGCNRLDSRSRTGPTVEIVEQPASKALRFRYECEGRSAGSIPGVNSTPENKTFPTIRIIGYKGRAIVVVSCVTKDFPYRPHPHNLVGKEVCRRGVCTVEVPCEAMTVSFDKLGIQCVKRKDIEEALKLREENRVDPFRTGFDHKRQPTSIDLNAVRLCFQVFVEGQEKGKFTVPLQPVVSEPIYDKKAMSDLVICKLSHCSASVAGGTEMVLLCEKVAKEDIEVRFFEERDGRTFWEGRGDFQPTHVHKQVAISFRTPSYKTHQVDQPVQAHIQLRRPSDGAVSEPLPFQLLPLGLGRSERIWSLRKSLALTHSIHSINRSANVNSRFKKASEPSDLAATLNRVIAYEQQLVASRPRLLDEFNNNCNEQNTEEVKRAHSKLSALRALNDIYNVKSNSNNFSKFDELPVIDSAKANEILIINDDDKTIVPERSVTIVPEVQQQNGSFIGEDGAKDKTNWYDYSEIGKWVEKSQEVDEEMNEQQQQPNELVMDTTQSNGDKSLDELLDKIYEDTHAKLIYEQQLLQQQSAALEKNGCSEMLEPDVPDNMTYTSMQMAMKNPVWVRVVRRPQTEKEAAAAAAATALATPLPGTTVSSPIIAIGSNNLPAEDAPPPRPPPPVARIKRDVSLGPEGPLPPLPPKRIRKTPSMPVLPQSSSQIITDQQTQSTAPRKNLPTPPNSYGSLPKQSKPGIFSKLFSKKSKKENVVASTSSLPGLVRAPLTASAKSMEVGLELQLESGQVTPPYGPELTEAEHYALYTAMAPKATASEFDEMSFYYSPVEDDPDSLRRKRQKFNNSPNAYVLRHVQAEAEKQSCLLNQMPQFNYSIIQPVKTEPADRLSPFGAPQSAASPPTFQGMGLRPISSPRRTPSPMMECAMYNIPPTQQNLGSQLQPIMIQQGSPSPLLMQDPMVGNNIATEPPKSSFVLGDSSIISDAIGNAINIANVLDENQQQPDFVDMSFSQFDHVDLNSLNISDIVKEAVNGTEVTGNAIEETGMTDSFTKLTRNAMQELCSLNSMYKPTTDDVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00286106;
90% Identity
-
80% Identity
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