Basic Information

Insect: Apis mellifera
Gene Symbol: bab2
Assembly: GCA_003254395.2
Location: NC:10864307-10891001[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 5.3e-13 7.1e-10 37.5 0.0 1 39 412 451 412 455 0.90

2 4 4.3e-12 5.7e-09 34.6 0.0 2 39 467 504 466 507 0.94

3 4 5.9e-19 8e-16 56.6 0.0 2 45 522 566 521 566 0.97

4 4 6.8e-19 9.1e-16 56.4 0.1 1 42 573 615 573 616 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	5.3e-13	7.1e-10	37.5	0.0	1	39	412	451	412	455	0.90
2	4	4.3e-12	5.7e-09	34.6	0.0	2	39	467	504	466	507	0.94
3	4	5.9e-19	8e-16	56.6	0.0	2	45	522	566	521	566	0.97
4	4	6.8e-19	9.1e-16	56.4	0.1	1	42	573	615	573	616	0.97

Sequence Information

Coding Sequence: ATGGTAAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAATAACTACCAATCAAACATGACGTCCGTTTTCCATCAACTGCTTCAAACGGAAGCTTTTGTCGACGTTACACTGGCATGTAACGAAGCTTCCTTAAAAGCGCACAAAGTGGTATTATCGGCGTGCAGTTCCTACTTTCAAAAGCTCCTACTTTCAAATCCCTGCAAACATCCGACAATCATTATGCCACAAGATGTATGCTTCAATGatctcaaatttataatagaattcgtCTATAGAGGGGAGATCGATGTTTCGCAAGCAGAACTTCAGTCGCTGTTGAAAACAGCCGATCAACTAAAGATCAAAGGATTGTGCGAGGTGCCTGAGAGCAGAGACGGCCCGCCCTCGGTAAGTTTGAGCTCGCCGCCTAGGGAGCCCGGCACACCTAGGATAAATTTCACCAAGCTGAAGAGGCATCATCCGAGATACAAGAGGCCCAGAACGACGTTCGAGCCTCGTGCCACGGATTCCAGGCATTACGATCGTTACAAAGAGGAGGAGTCGAACGAAAATTACAATTGGGAGCATAAAGAGACCCACATAGACTGGCAACCCGAAGATGAAGAGTGCACGGAGGCAACAGCGGGAGCAGTAGTCTTGGAAACTTGCCAACGCAACAGTAACAATAGTACGATTACCGCGGGCAACGCCAACACCAACGCtagcaataataacaataataataacaataacaacaacaacaacaacggcGCTAACGACAACGGCAACGGTAACGGTGcgagcaacaacaacaacaacggtgACATGTTTTGTCATACAGGCCTCGGACATTATGGCCATCATCCGGATCCAGGAGAGGTTGATCTACCGCCAGAAACGCAACCGACACCACCGAGTGCCACGTTGGTAGGCACTACGATCACCCATTTAAGAGACCCGGATCATCATTCCACAGACATTCAAAATTGTGACAGTGTGAAGATCAAATTCGAAACGTTGCACACGATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCGGATCGGGCGAGCGTCAGTTCGAAGAACGCGGCCGACAGCGATAACATGATGATGATCACGCCAGAGTTGCTCGGATTAATGCCCTCCGGTAGTTCTGTCCACTCGGATTCGGGGGAAAATAATTCAAGGGGACATTCTGGACAATCCAGTTCTCACCACCACGGCTCGAAATCGTGGACCCAAGAGGACATGGACGCCGCCCTCGAGGCGTTGAGAAATCACGATATGAGCCTCACGAAAGCCTCTGCAACGTTCGGTATACCGTCCACGACCCTGTGGCAAAGAGCGCATCGGCTTGGCATCGACACACCGAAAAAGGACGGGCCCACTAAATCGTGGAGCGACGAGAGTCTGAACAACGCGCTTGACGCGTTACGAACGGGCACGATATCGGCGAACAAAGCTTCGAAAGCGTTTGGCATACCATCCAGCACGTTGTACAAAATCGCGAGAAGGGAGGGGATCAGATTGGCGGCGCCTTTCAACGCCAGTCCTACTACGTGGTCGCCCGCCGACCTCGATCGCGCCCTCGAAGCGATACGTTCCGGCCAAACGTCTGTGCAAAGGGCCTCCACGGAATTCGGAATACCCACGGGGACGTTGTACGGTCGATGCAAAAGGGAAGGAATAGAGCTCAGCAGGAGCAATCCTACACCATGGAGCGAGGATGCTATGACCGAAGCCCTCGAAGCTGTcaggttaggtcaCATGAGCATTAATCAAGCAGCAATCCATTATAACCTACCGTACTCTTCTCTGTACGGTCGTTTTAAGAGAGGAAAATATGAAGAGCCAACGGTTGGTGAGATATCTCAAGACGGTAGCAGTCCCCATTTCCATCAAAGTCCAAGCCAAAATCACTCGTCTGCCGTGCCGGATCAAATGCCGTATCAAGGCAGCTGA
Protein Sequence: MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRATDSRHYDRYKEEESNENYNWEHKETHIDWQPEDEECTEATAGAVVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPTVGEISQDGSSPHFHQSPSQNHSSAVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00230773;
80% Identity: iTF_00142546;